RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 LINC00588Q9Y4M8 146 aa3.65□□□□□ -1.83
LSM3P2-201ENST00000551246 ZNF318Q5VUA4 2279 aa3.65□□□□□ -1.83
LSM3P2-201ENST00000551246 SZT2Q5T011 3432 aa3.64□□□□□ -1.83
LSM3P2-201ENST00000551246 DNAH14Q0VDD8 3507 aa3.64□□□□□ -1.83
LSM3P2-201ENST00000551246 H3BUA1 57 aa3.64□□□□□ -1.83
LSM3P2-201ENST00000551246 M0R2N4 97 aa3.64□□□□□ -1.83
LSM3P2-201ENST00000551246 Q6ZTI0 123 aa3.64□□□□□ -1.83
LSM3P2-201ENST00000551246 DYNLRB2Q8TF09 96 aa3.64□□□□□ -1.83
LSM3P2-201ENST00000551246 CYP4F30PQ9H0H9 118 aa3.64□□□□□ -1.83
LSM3P2-201ENST00000551246 CDC42SE2Q9NRR3 84 aa3.64□□□□□ -1.83
LSM3P2-201ENST00000551246 UNC80Q8N2C7 3258 aa3.63□□□□□ -1.83
LSM3P2-201ENST00000551246 PLCE1Q9P212 2302 aa3.63□□□□□ -1.83
LSM3P2-201ENST00000551246 G3V318 75 aa3.63□□□□□ -1.83
LSM3P2-201ENST00000551246 H3BQ85 93 aa3.63□□□□□ -1.83
LSM3P2-201ENST00000551246 FUSP35637 526 aaKnown RBP eCLIP3.63□□□□□ -1.83
LSM3P2-201ENST00000551246 BSPH1Q075Z2 132 aa3.63□□□□□ -1.83
LSM3P2-201ENST00000551246 COX7B2Q8TF08 81 aa3.63□□□□□ -1.83
LSM3P2-201ENST00000551246 RETNQ9HD89 108 aa3.63□□□□□ -1.83
LSM3P2-201ENST00000551246 TRBV10-1A0A0K0K1A3 114 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 PLA2G2AP14555 144 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 ECSCRQ19T08 205 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 DEFB114Q30KQ6 69 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 LINC00575Q6W349 94 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 NTM-AS1Q6ZSK4 140 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 PHF5AQ7RTV0 110 aaKnown RBP3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 C5orf56Q8N8D9 126 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 MPLKIPQ8TAP9 179 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 USMG5Q96IX5 58 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 RHPN1-AS1Q9BWJ2 59 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 RBM12B-AS1Q9P1G2 102 aa3.62□□□□□ -1.83
LSM3P2-201ENST00000551246 TRANK1O15050 2925 aa3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 IGHV4-30-2A0A087WSY4 118 aa3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 DNAJC9-AS1A6NH13 148 aa3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 LYRM9A8MSI8 78 aa3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 ATP1A1-AS1Q5TC04 95 aa3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 DGAT2L7PQ6IED9 249 aa3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 CD164L2Q6UWJ8 174 aa3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 KTN1-AS1Q86SY8 53 aa3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 FDCSPQ8NFU4 85 aa3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 C11orf68Q9H3H3 251 aaKnown RBP3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 AHCTF1Q8WYP5 2266 aa3.61□□□□□ -1.83
LSM3P2-201ENST00000551246 KIAA0100Q14667 2235 aaKnown RBP3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 XIRP2A4UGR9 3374 aa3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 A0A087WZ39 114 aa3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 TRAV22A0A0B4J277 110 aa3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 IGHV3OR16-9A0A0B4J2B5 98 aa3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 BPY2O14599 106 aa3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 IGKV4-1P06312 121 aa3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 DAD1P61803 113 aa3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 IGFL3Q6UXB1 125 aa3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 ZNF843Q8N446 348 aa3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 CELA1Q9UNI1 258 aa3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 RANBP2P49792 3224 aaKnown RBP3.6□□□□□ -1.83
LSM3P2-201ENST00000551246 BRCA2P51587 3418 aa3.59□□□□□ -1.83
LSM3P2-201ENST00000551246 A6NN06 94 aa3.59□□□□□ -1.83
LSM3P2-201ENST00000551246 LYNX1G3V0Z9 82 aa3.59□□□□□ -1.83
LSM3P2-201ENST00000551246 C19orf84I3L1E1 186 aa3.59□□□□□ -1.83
LSM3P2-201ENST00000551246 M0R378 163 aa3.59□□□□□ -1.83
LSM3P2-201ENST00000551246 LYNX1P0DP58 116 aa3.59□□□□□ -1.83
LSM3P2-201ENST00000551246 SYCNQ0VAF6 134 aa3.59□□□□□ -1.83
LSM3P2-201ENST00000551246 Q5VV11 94 aa3.59□□□□□ -1.83
LSM3P2-201ENST00000551246 SPATA3Q8NHX4 192 aa3.59□□□□□ -1.83
LSM3P2-201ENST00000551246 MUC7Q8TAX7 377 aa3.59□□□□□ -1.83
LSM3P2-201ENST00000551246 PSCAO43653 123 aa3.58□□□□□ -1.84
LSM3P2-201ENST00000551246 NDUFS5O43920 106 aa3.58□□□□□ -1.84
LSM3P2-201ENST00000551246 GNLYP22749 145 aa3.58□□□□□ -1.84
LSM3P2-201ENST00000551246 MRPL55Q7Z7F7 128 aaKnown RBP3.58□□□□□ -1.84
LSM3P2-201ENST00000551246 C1orf64Q8NEQ6 169 aa3.58□□□□□ -1.84
LSM3P2-201ENST00000551246 URB1O60287 2271 aaKnown RBP3.58□□□□□ -1.84
LSM3P2-201ENST00000551246 TRBV6-8A0A0A6YYG3 113 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 IGHV3-73A0A0B4J1V6 119 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 LINC00158P58513 81 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 UBE2BP63146 152 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 HAMPP81172 84 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 ADORA2A-AS1P86434 159 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 SPINK13Q1W4C9 94 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 C10orf25Q5T742 122 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 ATP11AUNQ6ZP68 121 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 STHQ8IWL8 128 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 LINC00612Q8N6U2 182 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 WNK2Q9Y3S1 2297 aa3.57□□□□□ -1.84
LSM3P2-201ENST00000551246 ICE1Q9Y2F5 2266 aa3.56□□□□□ -1.84
LSM3P2-201ENST00000551246 LOC100131303A0A0U1RQF7 123 aa3.56□□□□□ -1.84
LSM3P2-201ENST00000551246 IGHV4-30-4P0DP06 118 aa3.56□□□□□ -1.84
LSM3P2-201ENST00000551246 HIGD2AQ9BW72 106 aa3.56□□□□□ -1.84
LSM3P2-201ENST00000551246 ABCA4P78363 2273 aa3.55□□□□□ -1.84
LSM3P2-201ENST00000551246 IGHV4-28A0A0C4DH34 117 aa3.55□□□□□ -1.84
LSM3P2-201ENST00000551246 C16orf90A8MZG2 172 aa3.55□□□□□ -1.84
LSM3P2-201ENST00000551246 IGHV4-59P01825 116 aa3.55□□□□□ -1.84
LSM3P2-201ENST00000551246 ELOF1P60002 83 aaKnown RBP3.55□□□□□ -1.84
LSM3P2-201ENST00000551246 LPAL2Q16609 132 aa3.55□□□□□ -1.84
LSM3P2-201ENST00000551246 C11orf71Q6IPW1 123 aa3.55□□□□□ -1.84
LSM3P2-201ENST00000551246 Q8NDZ9 215 aa3.55□□□□□ -1.84
LSM3P2-201ENST00000551246 UBE2E2Q96LR5 201 aa3.55□□□□□ -1.84
LSM3P2-201ENST00000551246 IGHV4-61A0A0C4DH41 118 aa3.54□□□□□ -1.84
LSM3P2-201ENST00000551246 LOC101927531A0A1B0GV80 90 aa3.54□□□□□ -1.84
LSM3P2-201ENST00000551246 A8MU10 97 aa3.54□□□□□ -1.84
LSM3P2-201ENST00000551246 A8MUN3 132 aa3.54□□□□□ -1.84
LSM3P2-201ENST00000551246 IGLV6-57P01721 117 aa3.54□□□□□ -1.84
LSM3P2-201ENST00000551246 COX17Q14061 63 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms