RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
SCN8A-206ENST00000550891 MRPL23Q16540 153 aaKnown RBP10.84□□□□□ -0.67
SCN8A-206ENST00000550891 SPCS1Q9Y6A9 102 aa10.84□□□□□ -0.67
SCN8A-206ENST00000550891 IGHV3-30P01768 117 aa10.83□□□□□ -0.67
SCN8A-206ENST00000550891 IGHV3-30-5P0DP03 117 aa10.83□□□□□ -0.67
SCN8A-206ENST00000550891 CIRBPQ14011 172 aaKnown RBP10.83□□□□□ -0.67
SCN8A-206ENST00000550891 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.67
SCN8A-206ENST00000550891 G3V4G9 280 aa10.83□□□□□ -0.68
SCN8A-206ENST00000550891 RETNQ9HD89 108 aa10.82□□□□□ -0.68
SCN8A-206ENST00000550891 ICOSQ9Y6W8 199 aa10.82□□□□□ -0.68
SCN8A-206ENST00000550891 SH2D6Q7Z4S9 175 aa10.82□□□□□ -0.68
SCN8A-206ENST00000550891 TRRAPQ9Y4A5 3859 aa10.82□□□□□ -0.68
SCN8A-206ENST00000550891 IGLL5B9A064 214 aa10.82□□□□□ -0.68
SCN8A-206ENST00000550891 SMIM1B2RUZ4 78 aa10.81□□□□□ -0.68
SCN8A-206ENST00000550891 RBX1P62877 108 aa10.81□□□□□ -0.68
SCN8A-206ENST00000550891 A0A1B0GWB2 263 aa10.81□□□□□ -0.68
SCN8A-206ENST00000550891 Q9H8V8 135 aa10.81□□□□□ -0.68
SCN8A-206ENST00000550891 PGPEP1Q9NXJ5 209 aa10.81□□□□□ -0.68
SCN8A-206ENST00000550891 NDUFA1O15239 70 aa10.8□□□□□ -0.68
SCN8A-206ENST00000550891 SS18Q15532 418 aa10.8□□□□□ -0.68
SCN8A-206ENST00000550891 COL6A5A8TX70 2615 aa10.8□□□□□ -0.68
SCN8A-206ENST00000550891 FBN1P35555 2871 aaKnown RBP10.8□□□□□ -0.68
SCN8A-206ENST00000550891 K7EP34 96 aa10.8□□□□□ -0.68
SCN8A-206ENST00000550891 IGLV5-39A0A0G2JS06 123 aa10.8□□□□□ -0.68
SCN8A-206ENST00000550891 A0A1B0GUV1 79 aa10.8□□□□□ -0.68
SCN8A-206ENST00000550891 MUSTN1Q8IVN3 82 aa10.8□□□□□ -0.68
SCN8A-206ENST00000550891 TOMM7Q9P0U1 55 aa10.79□□□□□ -0.68
SCN8A-206ENST00000550891 MEIG1Q5JSS6 88 aa10.79□□□□□ -0.68
SCN8A-206ENST00000550891 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.78□□□□□ -0.68
SCN8A-206ENST00000550891 A4D1N5 150 aa10.78□□□□□ -0.68
SCN8A-206ENST00000550891 ZNF625Q96I27 306 aaPredicted RBP10.78□□□□□ -0.68
SCN8A-206ENST00000550891 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
SCN8A-206ENST00000550891 LINC00959A0A1B0GUT2 108 aa10.77□□□□□ -0.68
SCN8A-206ENST00000550891 ANGP03950 147 aaKnown RBP10.77□□□□□ -0.69
SCN8A-206ENST00000550891 LYRM7Q5U5X0 104 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 LOC107984156A0A0G2JMH3 177 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 TIMM17BO60830 172 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 MIAQ16674 131 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 ARL17AQ8IVW1 177 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 SPANXDQ9BXN6 97 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 SPANXCQ9NY87 97 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 PRO1854Q9UHT4 67 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 CFC1BP0CG36 223 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 CFC1P0CG37 223 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 XCL1P47992 114 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 NPC2P61916 151 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 HERV-K104P63124 156 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 C5orf38Q86SI9 138 aa10.76□□□□□ -0.69
SCN8A-206ENST00000550891 COPS9Q8WXC6 57 aa10.75□□□□□ -0.69
SCN8A-206ENST00000550891 A0A0U1RRA0 63 aa10.75□□□□□ -0.69
SCN8A-206ENST00000550891 COX7B2Q8TF08 81 aa10.75□□□□□ -0.69
SCN8A-206ENST00000550891 Q1RN00 199 aa10.75□□□□□ -0.69
SCN8A-206ENST00000550891 LELP1Q5T871 98 aa10.74□□□□□ -0.69
SCN8A-206ENST00000550891 IFITM1P13164 125 aa10.74□□□□□ -0.69
SCN8A-206ENST00000550891 ADAMTSL4-AS1Q5T5F5 129 aa10.74□□□□□ -0.69
SCN8A-206ENST00000550891 SFTA2Q6UW10 78 aa10.74□□□□□ -0.69
SCN8A-206ENST00000550891 LINC00269Q8N2A0 174 aa10.74□□□□□ -0.69
SCN8A-206ENST00000550891 C11orf68Q9H3H3 251 aaKnown RBP10.74□□□□□ -0.69
SCN8A-206ENST00000550891 IGHV3OR16-9A0A0B4J2B5 98 aa10.73□□□□□ -0.69
SCN8A-206ENST00000550891 LITAFQ99732 161 aa10.73□□□□□ -0.69
SCN8A-206ENST00000550891 H7C2G1 150 aa10.73□□□□□ -0.69
SCN8A-206ENST00000550891 DEFB121Q5J5C9 76 aa10.73□□□□□ -0.69
SCN8A-206ENST00000550891 DAND5Q8N907 189 aa10.73□□□□□ -0.69
SCN8A-206ENST00000550891 A0A087WZ39 114 aa10.72□□□□□ -0.69
SCN8A-206ENST00000550891 A0A0J9YWU9 116 aa10.72□□□□□ -0.69
SCN8A-206ENST00000550891 TSPAN13O95857 204 aa10.72□□□□□ -0.69
SCN8A-206ENST00000550891 SCGB1C2P0DMR2 95 aa10.72□□□□□ -0.69
SCN8A-206ENST00000550891 PSMB2P49721 201 aa10.72□□□□□ -0.69
SCN8A-206ENST00000550891 Q6ZTC4 211 aa10.72□□□□□ -0.69
SCN8A-206ENST00000550891 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
SCN8A-206ENST00000550891 A0A0B4J2C4 111 aa10.72□□□□□ -0.69
SCN8A-206ENST00000550891 PRB2P02812 416 aaPredicted RBP10.71□□□□□ -0.69
SCN8A-206ENST00000550891 REG3AQ06141 175 aa10.71□□□□□ -0.69
SCN8A-206ENST00000550891 C11orf45Q8TAV5 145 aa10.71□□□□□ -0.69
SCN8A-206ENST00000550891 C6orf226Q5I0X4 101 aa10.71□□□□□ -0.7
SCN8A-206ENST00000550891 KPRPQ5T749 579 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-206ENST00000550891 SPATA25Q9BR10 227 aa10.69□□□□□ -0.7
SCN8A-206ENST00000550891 NOTCH1P46531 2555 aa10.69□□□□□ -0.7
SCN8A-206ENST00000550891 IGLV10-54A0A075B6I4 117 aa10.69□□□□□ -0.7
SCN8A-206ENST00000550891 MALP21145 153 aa10.69□□□□□ -0.7
SCN8A-206ENST00000550891 MRAPQ8TCY5 172 aa10.69□□□□□ -0.7
SCN8A-206ENST00000550891 H3BNG1 76 aa10.68□□□□□ -0.7
SCN8A-206ENST00000550891 PKD1L1Q8TDX9 2849 aa10.68□□□□□ -0.7
SCN8A-206ENST00000550891 H3BMG7 143 aa10.68□□□□□ -0.7
SCN8A-206ENST00000550891 COX7A2LO14548 114 aa10.68□□□□□ -0.7
SCN8A-206ENST00000550891 LYPD5Q6UWN5 251 aa10.68□□□□□ -0.7
SCN8A-206ENST00000550891 CHCHD10Q8WYQ3 142 aaPredicted RBP10.68□□□□□ -0.7
SCN8A-206ENST00000550891 DEFB131BA0A096LNP1 70 aa10.67□□□□□ -0.7
SCN8A-206ENST00000550891 NANOS2P60321 138 aaKnown RBP10.67□□□□□ -0.7
SCN8A-206ENST00000550891 CD164L2Q6UWJ8 174 aa10.67□□□□□ -0.7
SCN8A-206ENST00000550891 LINC00158P58513 81 aa10.67□□□□□ -0.7
SCN8A-206ENST00000550891 LINC00308Q8TCZ7 52 aa10.67□□□□□ -0.7
SCN8A-206ENST00000550891 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
SCN8A-206ENST00000550891 Q8N3U1 123 aa10.66□□□□□ -0.7
SCN8A-206ENST00000550891 CRPP02741 224 aa10.66□□□□□ -0.7
SCN8A-206ENST00000550891 KLK12Q9UKR0 248 aa10.66□□□□□ -0.7
SCN8A-206ENST00000550891 CKS1BP61024 79 aa10.65□□□□□ -0.7
SCN8A-206ENST00000550891 CFAP161Q6P656 301 aa10.65□□□□□ -0.7
SCN8A-206ENST00000550891 TRBV20-1A0A075B6N2 111 aa10.64□□□□□ -0.71
SCN8A-206ENST00000550891 LINC01561Q8N1V8 128 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms