RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 UBE2D3P61077 147 aa8.21□□□□□ -1.1
RPH3A-217ENST00000549913 UBE2D2P62837 147 aa8.21□□□□□ -1.1
RPH3A-217ENST00000549913 RAI1Q7Z5J4 1906 aaPredicted RBP8.21□□□□□ -1.1
RPH3A-217ENST00000549913 PRB2P02812 416 aaPredicted RBP8.21□□□□□ -1.1
RPH3A-217ENST00000549913 TSPEAR-AS2P59090 65 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 SMIM11BQ8TCY0 68 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 XAGE1AQ9HD64 81 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 CCDC179H3BU77 68 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 C5orf47Q569G3 176 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 BRI3O95415 125 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 IGKV2-24A0A0C4DH68 120 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 EDN2P20800 178 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 C14orf177Q52M58 125 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 CDC42SE2Q9NRR3 84 aa8.2□□□□□ -1.1
RPH3A-217ENST00000549913 LOC100131303A0A0U1RQF7 123 aa8.19□□□□□ -1.1
RPH3A-217ENST00000549913 NDUFA7O95182 113 aa8.19□□□□□ -1.1
RPH3A-217ENST00000549913 ODF3L2Q3SX64 289 aa8.19□□□□□ -1.1
RPH3A-217ENST00000549913 Q6Q795 121 aa8.19□□□□□ -1.1
RPH3A-217ENST00000549913 SERP2Q8N6R1 65 aa8.19□□□□□ -1.1
RPH3A-217ENST00000549913 LINC00959A0A1B0GUT2 108 aa8.19□□□□□ -1.1
RPH3A-217ENST00000549913 LINC00242Q5T6M2 205 aa8.19□□□□□ -1.1
RPH3A-217ENST00000549913 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
RPH3A-217ENST00000549913 LY6G6DO95868 133 aa8.19□□□□□ -1.1
RPH3A-217ENST00000549913 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
RPH3A-217ENST00000549913 FAM240AA0A1B0GVK7 77 aa8.18□□□□□ -1.1
RPH3A-217ENST00000549913 USP17L23D6RBM5 183 aa8.18□□□□□ -1.1
RPH3A-217ENST00000549913 KIR2DL5BQ8NHK3 375 aa8.18□□□□□ -1.1
RPH3A-217ENST00000549913 SCXQ7RTU7 201 aa8.18□□□□□ -1.1
RPH3A-217ENST00000549913 HIGD2AQ9BW72 106 aa8.18□□□□□ -1.1
RPH3A-217ENST00000549913 SHISA2Q6UWI4 295 aa8.17□□□□□ -1.1
RPH3A-217ENST00000549913 ZNF580Q9UK33 172 aa8.17□□□□□ -1.1
RPH3A-217ENST00000549913 SYCNQ0VAF6 134 aa8.17□□□□□ -1.1
RPH3A-217ENST00000549913 ADAMTS20P59510 1910 aa8.17□□□□□ -1.1
RPH3A-217ENST00000549913 COX7CP15954 63 aa8.16□□□□□ -1.1
RPH3A-217ENST00000549913 LELP1Q5T871 98 aa8.16□□□□□ -1.1
RPH3A-217ENST00000549913 CHCHD7Q9BUK0 85 aa8.16□□□□□ -1.1
RPH3A-217ENST00000549913 SMIM1B2RUZ4 78 aa8.15□□□□□ -1.1
RPH3A-217ENST00000549913 Q6ZQY7 126 aa8.15□□□□□ -1.1
RPH3A-217ENST00000549913 AMELXQ99217 191 aa8.15□□□□□ -1.1
RPH3A-217ENST00000549913 IL17DQ8TAD2 202 aa8.15□□□□□ -1.1
RPH3A-217ENST00000549913 B9D2Q9BPU9 175 aa8.15□□□□□ -1.1
RPH3A-217ENST00000549913 TET2Q6N021 2002 aaPredicted RBP8.15□□□□□ -1.11
RPH3A-217ENST00000549913 KRTAP10-9P60411 292 aa8.15□□□□□ -1.11
RPH3A-217ENST00000549913 ADAMTSL4-AS1Q5T5F5 129 aa8.15□□□□□ -1.11
RPH3A-217ENST00000549913 BRK1Q8WUW1 75 aa8.14□□□□□ -1.11
RPH3A-217ENST00000549913 KPRPQ5T749 579 aaPredicted RBP8.14□□□□□ -1.11
RPH3A-217ENST00000549913 ZNF462Q96JM2 2506 aa8.14□□□□□ -1.11
RPH3A-217ENST00000549913 CCKP06307 115 aa8.14□□□□□ -1.11
RPH3A-217ENST00000549913 COX17Q14061 63 aa8.14□□□□□ -1.11
RPH3A-217ENST00000549913 Q8IZM0 81 aa8.14□□□□□ -1.11
RPH3A-217ENST00000549913 Q6JHZ5 121 aa8.13□□□□□ -1.11
RPH3A-217ENST00000549913 LINC00526Q96FQ7 95 aa8.13□□□□□ -1.11
RPH3A-217ENST00000549913 H0Y9J4 135 aa8.13□□□□□ -1.11
RPH3A-217ENST00000549913 COX6A2Q02221 97 aa8.13□□□□□ -1.11
RPH3A-217ENST00000549913 FASNP49327 2511 aaKnown RBP8.13□□□□□ -1.11
RPH3A-217ENST00000549913 TRAV10A0A0B4J240 114 aa8.12□□□□□ -1.11
RPH3A-217ENST00000549913 POLQO75417 2590 aa8.12□□□□□ -1.11
RPH3A-217ENST00000549913 LINC01546A6NGU7 62 aa8.12□□□□□ -1.11
RPH3A-217ENST00000549913 RPL28P46779 137 aaKnown RBP8.12□□□□□ -1.11
RPH3A-217ENST00000549913 IGLV1-51P01701 117 aa8.12□□□□□ -1.11
RPH3A-217ENST00000549913 FAM19A1Q7Z5A9 133 aa8.12□□□□□ -1.11
RPH3A-217ENST00000549913 CHKB-CPT1BH3BT56 60 aa8.11□□□□□ -1.11
RPH3A-217ENST00000549913 C1orf158Q8N1D5 194 aa8.11□□□□□ -1.11
RPH3A-217ENST00000549913 MUC7Q8TAX7 377 aa8.11□□□□□ -1.11
RPH3A-217ENST00000549913 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
RPH3A-217ENST00000549913 M0R378 163 aa8.1□□□□□ -1.11
RPH3A-217ENST00000549913 LINC00694P0DN24 101 aa8.1□□□□□ -1.11
RPH3A-217ENST00000549913 AGRNO00468 2067 aa8.1□□□□□ -1.11
RPH3A-217ENST00000549913 NDUFC1O43677 76 aa8.09□□□□□ -1.11
RPH3A-217ENST00000549913 FAM19A5Q7Z5A7 132 aaPredicted RBP8.09□□□□□ -1.11
RPH3A-217ENST00000549913 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
RPH3A-217ENST00000549913 MPLKIPQ8TAP9 179 aa8.09□□□□□ -1.11
RPH3A-217ENST00000549913 KIF25-AS1Q9Y6Z4 181 aa8.09□□□□□ -1.11
RPH3A-217ENST00000549913 NDUFC2-KCTD14E9PQ53 114 aa8.09□□□□□ -1.11
RPH3A-217ENST00000549913 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.09□□□□□ -1.11
RPH3A-217ENST00000549913 A0A087WZ39 114 aa8.09□□□□□ -1.11
RPH3A-217ENST00000549913 C3orf84H3BNL1 204 aa8.08□□□□□ -1.12
RPH3A-217ENST00000549913 M0QXV9 152 aa8.08□□□□□ -1.12
RPH3A-217ENST00000549913 A0A096LNI7 61 aa8.08□□□□□ -1.12
RPH3A-217ENST00000549913 BEAN1Q3B7T3 259 aa8.08□□□□□ -1.12
RPH3A-217ENST00000549913 ZNF73O43830 326 aaPredicted RBP8.08□□□□□ -1.12
RPH3A-217ENST00000549913 SNURFQ9Y675 71 aa8.08□□□□□ -1.12
RPH3A-217ENST00000549913 IGKV2-28A0A075B6P5 120 aa8.07□□□□□ -1.12
RPH3A-217ENST00000549913 IGKV2D-28P01615 120 aa8.07□□□□□ -1.12
RPH3A-217ENST00000549913 IGHV4-30-4P0DP06 118 aa8.07□□□□□ -1.12
RPH3A-217ENST00000549913 Q6ZSN1 163 aa8.07□□□□□ -1.12
RPH3A-217ENST00000549913 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.07□□□□□ -1.12
RPH3A-217ENST00000549913 PRRC2CQ9Y520 2896 aaKnown RBP8.07□□□□□ -1.12
RPH3A-217ENST00000549913 A0A0U1RQV1 116 aa8.07□□□□□ -1.12
RPH3A-217ENST00000549913 CYSRT1A8MQ03 144 aa8.07□□□□□ -1.12
RPH3A-217ENST00000549913 ATP5EP56381 51 aaPredicted RBP8.07□□□□□ -1.12
RPH3A-217ENST00000549913 NTM-AS1Q6ZSK4 140 aa8.07□□□□□ -1.12
RPH3A-217ENST00000549913 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.06□□□□□ -1.12
RPH3A-217ENST00000549913 PLA2G2AP14555 144 aa8.06□□□□□ -1.12
RPH3A-217ENST00000549913 ACANP16112 2415 aa8.06□□□□□ -1.12
RPH3A-217ENST00000549913 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
RPH3A-217ENST00000549913 Q8N814 137 aa8.06□□□□□ -1.12
RPH3A-217ENST00000549913 A0A087WYN8 130 aa8.06□□□□□ -1.12
RPH3A-217ENST00000549913 FAM19A3Q7Z5A8 133 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms