RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 TRBV24-1A0A075B6N3 115 aa8.23□□□□□ -1.09
TROAP-211ENST00000549891 IGHV3OR16-9A0A0B4J2B5 98 aa8.23□□□□□ -1.09
TROAP-211ENST00000549891 RPL32P62910 135 aaKnown RBP8.23□□□□□ -1.09
TROAP-211ENST00000549891 MRPL51Q4U2R6 128 aaKnown RBP8.23□□□□□ -1.09
TROAP-211ENST00000549891 FAM104BQ5XKR9 115 aa8.23□□□□□ -1.09
TROAP-211ENST00000549891 A0A1B0GW15 77 aa8.22□□□□□ -1.09
TROAP-211ENST00000549891 CKS2P33552 79 aa8.22□□□□□ -1.09
TROAP-211ENST00000549891 HBBP68871 147 aa8.22□□□□□ -1.09
TROAP-211ENST00000549891 FAM168BA1KXE4 195 aa8.21□□□□□ -1.1
TROAP-211ENST00000549891 UBE2D1P51668 147 aa8.21□□□□□ -1.1
TROAP-211ENST00000549891 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.1
TROAP-211ENST00000549891 MRPS36P82909 103 aaKnown RBP8.21□□□□□ -1.1
TROAP-211ENST00000549891 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.1
TROAP-211ENST00000549891 TGIF2-C20orf24A0A0A6YYL0 155 aa8.2□□□□□ -1.1
TROAP-211ENST00000549891 IFITM10A6NMD0 228 aa8.2□□□□□ -1.1
TROAP-211ENST00000549891 SRP19P09132 144 aaKnown RBP8.2□□□□□ -1.1
TROAP-211ENST00000549891 RPL13AP40429 203 aaKnown RBP8.2□□□□□ -1.1
TROAP-211ENST00000549891 UBE2BP63146 152 aa8.2□□□□□ -1.1
TROAP-211ENST00000549891 GAGE2EQ4V326 116 aa8.2□□□□□ -1.1
TROAP-211ENST00000549891 FAM74A3Q4VXF1 159 aa8.2□□□□□ -1.1
TROAP-211ENST00000549891 UNQ6190/PRO20217Q6UXQ8 127 aa8.2□□□□□ -1.1
TROAP-211ENST00000549891 SMIM2Q9BVW6 85 aa8.2□□□□□ -1.1
TROAP-211ENST00000549891 SMDT1Q9H4I9 107 aa8.2□□□□□ -1.1
TROAP-211ENST00000549891 C6orf48Q9UBA6 75 aa8.2□□□□□ -1.1
TROAP-211ENST00000549891 GAGE2DQ9UEU5 116 aa8.2□□□□□ -1.1
TROAP-211ENST00000549891 TNFRSF6BO95407 300 aa8.19□□□□□ -1.1
TROAP-211ENST00000549891 C10orf25Q5T742 122 aa8.19□□□□□ -1.1
TROAP-211ENST00000549891 TRBV30A0A0K0K1B3 111 aa8.18□□□□□ -1.1
TROAP-211ENST00000549891 F8W036 122 aa8.18□□□□□ -1.1
TROAP-211ENST00000549891 M0QXV9 152 aa8.18□□□□□ -1.1
TROAP-211ENST00000549891 S100A8P05109 93 aa8.18□□□□□ -1.1
TROAP-211ENST00000549891 AKAP14Q86UN6 197 aa8.18□□□□□ -1.1
TROAP-211ENST00000549891 KRTAP11-1Q8IUC1 163 aa8.18□□□□□ -1.1
TROAP-211ENST00000549891 FAM104AQ969W3 186 aa8.18□□□□□ -1.1
TROAP-211ENST00000549891 SMIM27A0A1W2PRY6 76 aa8.17□□□□□ -1.1
TROAP-211ENST00000549891 KRTAP1-4P0C5Y4 121 aa8.17□□□□□ -1.1
TROAP-211ENST00000549891 IFI27P40305 119 aaPredicted RBP8.17□□□□□ -1.1
TROAP-211ENST00000549891 RPL23P62829 140 aaKnown RBP8.17□□□□□ -1.1
TROAP-211ENST00000549891 ADIRFQ15847 76 aa8.17□□□□□ -1.1
TROAP-211ENST00000549891 D6R8Y8 96 aa8.16□□□□□ -1.1
TROAP-211ENST00000549891 NDUFC2-KCTD14E9PQ53 114 aa8.16□□□□□ -1.1
TROAP-211ENST00000549891 PPBPP02775 128 aa8.16□□□□□ -1.1
TROAP-211ENST00000549891 RAB5AP20339 215 aa8.16□□□□□ -1.1
TROAP-211ENST00000549891 PRR4Q16378 134 aa8.16□□□□□ -1.1
TROAP-211ENST00000549891 PACRGQ96M98 296 aaPredicted RBP8.16□□□□□ -1.1
TROAP-211ENST00000549891 NAT8Q9UHE5 227 aa8.16□□□□□ -1.1
TROAP-211ENST00000549891 A0A0U1RQV1 116 aa8.15□□□□□ -1.1
TROAP-211ENST00000549891 CARHSP1Q9Y2V2 147 aaKnown RBP8.15□□□□□ -1.1
TROAP-211ENST00000549891 NPYP01303 97 aa8.14□□□□□ -1.11
TROAP-211ENST00000549891 KIAA0087Q14695 138 aa8.14□□□□□ -1.11
TROAP-211ENST00000549891 PYGO1Q9Y3Y4 419 aa8.14□□□□□ -1.11
TROAP-211ENST00000549891 KRTAP9-6A0A140TA67 174 aa8.13□□□□□ -1.11
TROAP-211ENST00000549891 LINC00242Q5T6M2 205 aa8.13□□□□□ -1.11
TROAP-211ENST00000549891 MRPL54Q6P161 138 aaKnown RBP8.13□□□□□ -1.11
TROAP-211ENST00000549891 KRTAP7-1Q8IUC3 87 aa8.13□□□□□ -1.11
TROAP-211ENST00000549891 LINC01561Q8N1V8 128 aa8.13□□□□□ -1.11
TROAP-211ENST00000549891 TMEM141Q96I45 108 aa8.13□□□□□ -1.11
TROAP-211ENST00000549891 MUC2Q02817 5179 aa8.12□□□□□ -1.11
TROAP-211ENST00000549891 C9orf129Q5T035 196 aaKnown RBP8.12□□□□□ -1.11
TROAP-211ENST00000549891 C2orf82Q6UX34 121 aa8.12□□□□□ -1.11
TROAP-211ENST00000549891 TEX43Q6ZNM6 134 aa8.12□□□□□ -1.11
TROAP-211ENST00000549891 ORMDL3Q8N138 153 aa8.12□□□□□ -1.11
TROAP-211ENST00000549891 C2orf88Q9BSF0 95 aa8.12□□□□□ -1.11
TROAP-211ENST00000549891 IGLV4-3A0A075B6K6 122 aa8.11□□□□□ -1.11
TROAP-211ENST00000549891 NUPR1O60356 82 aa8.11□□□□□ -1.11
TROAP-211ENST00000549891 ZNF861PO60384 105 aa8.11□□□□□ -1.11
TROAP-211ENST00000549891 PRSS2P07478 247 aa8.11□□□□□ -1.11
TROAP-211ENST00000549891 A0A1B0GXF2 115 aa8.1□□□□□ -1.11
TROAP-211ENST00000549891 CKS1BP61024 79 aa8.1□□□□□ -1.11
TROAP-211ENST00000549891 Q6ZN92 141 aa8.1□□□□□ -1.11
TROAP-211ENST00000549891 TMEM136Q6ZRR5 245 aa8.1□□□□□ -1.11
TROAP-211ENST00000549891 PEA15Q15121 130 aa8.09□□□□□ -1.11
TROAP-211ENST00000549891 LBHQ53QV2 105 aaPredicted RBP8.09□□□□□ -1.11
TROAP-211ENST00000549891 PRELID3AQ96N28 172 aa8.09□□□□□ -1.11
TROAP-211ENST00000549891 C6orf226Q5I0X4 101 aa8.08□□□□□ -1.12
TROAP-211ENST00000549891 ATP5L2Q7Z4Y8 100 aa8.08□□□□□ -1.12
TROAP-211ENST00000549891 TOMM7Q9P0U1 55 aa8.08□□□□□ -1.12
TROAP-211ENST00000549891 LAMTOR2Q9Y2Q5 125 aa8.08□□□□□ -1.12
TROAP-211ENST00000549891 PRSS47A8MTI9 375 aa8.07□□□□□ -1.12
TROAP-211ENST00000549891 Q8IZM0 81 aa8.07□□□□□ -1.12
TROAP-211ENST00000549891 VCX2Q9H322 139 aa8.07□□□□□ -1.12
TROAP-211ENST00000549891 MAP1LC3AQ9H492 121 aa8.07□□□□□ -1.12
TROAP-211ENST00000549891 CYSLTR1Q9Y271 337 aa8.07□□□□□ -1.12
TROAP-211ENST00000549891 C22orf24Q9Y442 160 aa8.07□□□□□ -1.12
TROAP-211ENST00000549891 hCG_2014768A0A024R1R8 64 aa8.06□□□□□ -1.12
TROAP-211ENST00000549891 C9JQL5 133 aa8.06□□□□□ -1.12
TROAP-211ENST00000549891 NPSP0C0P6 89 aa8.06□□□□□ -1.12
TROAP-211ENST00000549891 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
TROAP-211ENST00000549891 KRTAP9-2Q9BYQ4 174 aa8.06□□□□□ -1.12
TROAP-211ENST00000549891 LOC389332A0A1B0GUA5 103 aa8.05□□□□□ -1.12
TROAP-211ENST00000549891 TSPAN13O95857 204 aa8.05□□□□□ -1.12
TROAP-211ENST00000549891 SEC11AP67812 179 aa8.05□□□□□ -1.12
TROAP-211ENST00000549891 C2orf66Q6UXQ4 117 aa8.05□□□□□ -1.12
TROAP-211ENST00000549891 LINC00469Q8N7U9 141 aa8.05□□□□□ -1.12
TROAP-211ENST00000549891 ALKBH7Q9BT30 221 aaPredicted RBP8.05□□□□□ -1.12
TROAP-211ENST00000549891 CTDSP1Q9GZU7 261 aa8.05□□□□□ -1.12
TROAP-211ENST00000549891 TP73-AS1Q9UF72 201 aa8.05□□□□□ -1.12
TROAP-211ENST00000549891 CRYGAP11844 174 aa8.04□□□□□ -1.12
TROAP-211ENST00000549891 ORMDL2Q53FV1 153 aa8.04□□□□□ -1.12
TROAP-211ENST00000549891 MRPL55Q7Z7F7 128 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms