RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 ANXA2RQ3ZCQ2 193 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 Q6ZQT7 251 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 ZNF493Q6ZR52 646 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 Q6ZSN1 163 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 Q8N1X5 172 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 IFI27L1Q96BM0 104 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 FAM167A-AS1Q96KT0 104 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 PAXXQ9BUH6 204 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 TMEM14CQ9P0S9 112 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 PYGO1Q9Y3Y4 419 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 HECTD4Q9Y4D8 3996 aa4.53□□□□□ -1.68
NPAS3-207ENST00000549770 DYNC1H1Q14204 4646 aaKnown RBP4.52□□□□□ -1.69
NPAS3-207ENST00000549770 FAM236AA0A1B0GUQ0 79 aa4.52□□□□□ -1.69
NPAS3-207ENST00000549770 FAM236BA0A1B0GV22 79 aa4.52□□□□□ -1.69
NPAS3-207ENST00000549770 DGAT2L7PQ6IED9 249 aa4.52□□□□□ -1.69
NPAS3-207ENST00000549770 PCP2Q8IVA1 136 aa4.52□□□□□ -1.69
NPAS3-207ENST00000549770 FXYD5Q96DB9 178 aa4.52□□□□□ -1.69
NPAS3-207ENST00000549770 ZNF503Q96F45 646 aa4.52□□□□□ -1.69
NPAS3-207ENST00000549770 ZNF492Q9P255 531 aa4.52□□□□□ -1.69
NPAS3-207ENST00000549770 EPDR1Q9UM22 224 aa4.52□□□□□ -1.69
NPAS3-207ENST00000549770 DNAH11Q96DT5 4516 aa4.52□□□□□ -1.69
NPAS3-207ENST00000549770 PKD1P98161 4303 aa4.52□□□□□ -1.69
NPAS3-207ENST00000549770 A0A096LNJ9 63 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 PLAC8L1A1L4L8 177 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 C19orf71A6NCJ1 209 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 LINC01546A6NGU7 62 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 OXTP01178 125 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 IGKCP01834 107 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 TRACP01848 142 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 RNASE4P34096 147 aaKnown RBP4.51□□□□□ -1.69
NPAS3-207ENST00000549770 LEPP41159 167 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 UBE2L3P68036 154 aaKnown RBP4.51□□□□□ -1.69
NPAS3-207ENST00000549770 CD164Q04900 197 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 PDE6HQ13956 83 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 Q8TAT8 98 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 C16orf74Q96GX8 76 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 C2orf48Q96LS8 159 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 AGPAT4-IT1Q9H0P7 198 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 AAMDCQ9H7C9 122 aa4.51□□□□□ -1.69
NPAS3-207ENST00000549770 NOP10Q9NPE3 64 aaKnown RBP4.51□□□□□ -1.69
NPAS3-207ENST00000549770 LYRM9A8MSI8 78 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 H3BT86 120 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 M0R2N4 97 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 SLC25A20O43772 301 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 HBDP02042 147 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 FOXA3P55318 350 aaPredicted RBP4.5□□□□□ -1.69
NPAS3-207ENST00000549770 CACNG7P62955 275 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 PRR9Q5T870 116 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 SDIM1Q6ZPB5 146 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 TMEM263Q8WUH6 116 aaKnown RBP4.5□□□□□ -1.69
NPAS3-207ENST00000549770 MRPL53Q96EL3 112 aaKnown RBP4.5□□□□□ -1.69
NPAS3-207ENST00000549770 RNASE7Q9H1E1 156 aaKnown RBP4.5□□□□□ -1.69
NPAS3-207ENST00000549770 Q9H3A6 140 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 FAM30AQ9NZY2 134 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 PKHD1P08F94 4074 aa4.5□□□□□ -1.69
NPAS3-207ENST00000549770 TRAV8-1A0A0A6YYK1 113 aa4.49□□□□□ -1.69
NPAS3-207ENST00000549770 HIGD1CA8MV81 97 aa4.49□□□□□ -1.69
NPAS3-207ENST00000549770 NDUFC2O95298 119 aa4.49□□□□□ -1.69
NPAS3-207ENST00000549770 TWIST1Q15672 202 aa4.49□□□□□ -1.69
NPAS3-207ENST00000549770 C9orf47Q6ZRZ4 202 aa4.49□□□□□ -1.69
NPAS3-207ENST00000549770 UBE2DNLQ8IWF7 75 aa4.49□□□□□ -1.69
NPAS3-207ENST00000549770 COPS9Q8WXC6 57 aa4.49□□□□□ -1.69
NPAS3-207ENST00000549770 UBE2WQ96B02 151 aa4.49□□□□□ -1.69
NPAS3-207ENST00000549770 CHCHD5Q9BSY4 110 aa4.49□□□□□ -1.69
NPAS3-207ENST00000549770 TIMM8BQ9Y5J9 83 aaPredicted RBP4.49□□□□□ -1.69
NPAS3-207ENST00000549770 IGLV2-18A0A075B6J9 118 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 TRAV13-1A0A0B4J241 112 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 FAM236DA0A1B0GTK5 79 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 PGPA6NDG6 321 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 KLLNB2CW77 178 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 TCL1BO95988 128 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 SLPIP03973 132 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 FAM236CP0DP71 79 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 ZNF138P52744 262 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 Q6ZTI0 123 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 LINC00643Q86TS7 51 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 ZFAND2AQ8N6M9 145 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 FAM19A4Q96LR4 140 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 UPK3BQ9BT76 320 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 OTORQ9NRC9 128 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 SERP1Q9Y6X1 66 aa4.48□□□□□ -1.69
NPAS3-207ENST00000549770 A0A0J9YY99 117 aa4.47□□□□□ -1.69
NPAS3-207ENST00000549770 SPINK4O60575 86 aa4.47□□□□□ -1.69
NPAS3-207ENST00000549770 LTAP01374 205 aa4.47□□□□□ -1.69
NPAS3-207ENST00000549770 SRSF9Q13242 221 aaKnown RBP eCLIP4.47□□□□□ -1.69
NPAS3-207ENST00000549770 C5orf38Q86SI9 138 aa4.47□□□□□ -1.69
NPAS3-207ENST00000549770 LYPD1Q8N2G4 141 aa4.47□□□□□ -1.69
NPAS3-207ENST00000549770 RPP21Q9H633 154 aaKnown RBP4.47□□□□□ -1.69
NPAS3-207ENST00000549770 HHLA3Q9XRX5 114 aa4.47□□□□□ -1.69
NPAS3-207ENST00000549770 HERC2O95714 4834 aa4.46□□□□□ -1.69
NPAS3-207ENST00000549770 NACAE9PAV3 2078 aa4.46□□□□□ -1.7
NPAS3-207ENST00000549770 TRGV11A0A075B6L2 103 aa4.46□□□□□ -1.7
NPAS3-207ENST00000549770 IGHV1OR15-1A0A075B7D0 117 aa4.46□□□□□ -1.7
NPAS3-207ENST00000549770 IGKV2D-26A0A0A0MRZ7 120 aa4.46□□□□□ -1.7
NPAS3-207ENST00000549770 TRGV1A0A0A0MS02 117 aa4.46□□□□□ -1.7
NPAS3-207ENST00000549770 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
NPAS3-207ENST00000549770 IGHV3-53P01767 116 aa4.46□□□□□ -1.7
NPAS3-207ENST00000549770 PSMB2P49721 201 aa4.46□□□□□ -1.7
NPAS3-207ENST00000549770 NPC2P61916 151 aa4.46□□□□□ -1.7
NPAS3-207ENST00000549770 MRPS36P82909 103 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms