RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 IGLV5-39A0A0G2JS06 123 aa13.27□□□□□ -0.28
BRF1-215ENST00000549655 TMEM238LA0A1B0GVL6 79 aa13.27□□□□□ -0.28
BRF1-215ENST00000549655 A6NJY4 79 aa13.27□□□□□ -0.28
BRF1-215ENST00000549655 SMIM1B2RUZ4 78 aa13.27□□□□□ -0.28
BRF1-215ENST00000549655 CCL25O15444 150 aa13.27□□□□□ -0.28
BRF1-215ENST00000549655 A0A1B0GWB2 263 aa13.27□□□□□ -0.29
BRF1-215ENST00000549655 A0A1B0GUV1 79 aa13.26□□□□□ -0.29
BRF1-215ENST00000549655 TMEM238C9JI98 176 aa13.25□□□□□ -0.29
BRF1-215ENST00000549655 RBX1P62877 108 aa13.25□□□□□ -0.29
BRF1-215ENST00000549655 MRPL23Q16540 153 aaKnown RBP13.25□□□□□ -0.29
BRF1-215ENST00000549655 A0A1W2PPM0 123 aa13.23□□□□□ -0.29
BRF1-215ENST00000549655 ICOSQ9Y6W8 199 aa13.23□□□□□ -0.29
BRF1-215ENST00000549655 NDUFA1O15239 70 aa13.23□□□□□ -0.29
BRF1-215ENST00000549655 LITAFQ99732 161 aa13.23□□□□□ -0.29
BRF1-215ENST00000549655 IGLL5B9A064 214 aa13.22□□□□□ -0.29
BRF1-215ENST00000549655 C11orf68Q9H3H3 251 aaKnown RBP13.22□□□□□ -0.29
BRF1-215ENST00000549655 SH2D6Q7Z4S9 175 aa13.21□□□□□ -0.29
BRF1-215ENST00000549655 NOTCH1P46531 2555 aa13.21□□□□□ -0.29
BRF1-215ENST00000549655 ANK2Q01484 3957 aa13.21□□□□□ -0.29
BRF1-215ENST00000549655 LINC00959A0A1B0GUT2 108 aa13.21□□□□□ -0.29
BRF1-215ENST00000549655 GAGE10A6NGK3 116 aa13.2□□□□□ -0.3
BRF1-215ENST00000549655 FABP2P12104 132 aa13.2□□□□□ -0.3
BRF1-215ENST00000549655 ADAMTSL4-AS1Q5T5F5 129 aa13.2□□□□□ -0.3
BRF1-215ENST00000549655 MUSTN1Q8IVN3 82 aa13.2□□□□□ -0.3
BRF1-215ENST00000549655 IGHV3OR16-9A0A0B4J2B5 98 aa13.2□□□□□ -0.3
BRF1-215ENST00000549655 APOMO95445 188 aa13.2□□□□□ -0.3
BRF1-215ENST00000549655 PRB2P02812 416 aaPredicted RBP13.2□□□□□ -0.3
BRF1-215ENST00000549655 Q9H8V8 135 aa13.2□□□□□ -0.3
BRF1-215ENST00000549655 DNAH3Q8TD57 4116 aa13.19□□□□□ -0.3
BRF1-215ENST00000549655 RPL24P83731 157 aaKnown RBP13.18□□□□□ -0.3
BRF1-215ENST00000549655 GTF2H5Q6ZYL4 71 aa13.18□□□□□ -0.3
BRF1-215ENST00000549655 A0A0J9YWU9 116 aa13.18□□□□□ -0.3
BRF1-215ENST00000549655 A4D1N5 150 aa13.18□□□□□ -0.3
BRF1-215ENST00000549655 TIMM17BO60830 172 aa13.18□□□□□ -0.3
BRF1-215ENST00000549655 CFC1BP0CG36 223 aa13.18□□□□□ -0.3
BRF1-215ENST00000549655 CFC1P0CG37 223 aa13.18□□□□□ -0.3
BRF1-215ENST00000549655 CLPSL2Q6UWE3 100 aa13.18□□□□□ -0.3
BRF1-215ENST00000549655 Q6ZTC4 211 aa13.18□□□□□ -0.3
BRF1-215ENST00000549655 SPANXDQ9BXN6 97 aa13.18□□□□□ -0.3
BRF1-215ENST00000549655 SPANXCQ9NY87 97 aa13.18□□□□□ -0.3
BRF1-215ENST00000549655 K7EP34 96 aa13.17□□□□□ -0.3
BRF1-215ENST00000549655 PRSS2P07478 247 aa13.17□□□□□ -0.3
BRF1-215ENST00000549655 LELP1Q5T871 98 aa13.17□□□□□ -0.3
BRF1-215ENST00000549655 SPCS1Q9Y6A9 102 aa13.17□□□□□ -0.3
BRF1-215ENST00000549655 SS18Q15532 418 aa13.16□□□□□ -0.3
BRF1-215ENST00000549655 Q8N3U1 123 aa13.16□□□□□ -0.3
BRF1-215ENST00000549655 ZNF625Q96I27 306 aaPredicted RBP13.16□□□□□ -0.3
BRF1-215ENST00000549655 PGPEP1Q9NXJ5 209 aa13.16□□□□□ -0.3
BRF1-215ENST00000549655 A0A087WZ39 114 aa13.16□□□□□ -0.3
BRF1-215ENST00000549655 MIAQ16674 131 aa13.16□□□□□ -0.3
BRF1-215ENST00000549655 C5orf38Q86SI9 138 aa13.15□□□□□ -0.3
BRF1-215ENST00000549655 LINC00269Q8N2A0 174 aa13.15□□□□□ -0.3
BRF1-215ENST00000549655 TENM3Q9P273 2699 aa13.15□□□□□ -0.31
BRF1-215ENST00000549655 ANGP03950 147 aaKnown RBP13.14□□□□□ -0.31
BRF1-215ENST00000549655 XCL1P47992 114 aa13.14□□□□□ -0.31
BRF1-215ENST00000549655 CIRBPQ14011 172 aaKnown RBP13.14□□□□□ -0.31
BRF1-215ENST00000549655 COX7B2Q8TF08 81 aa13.14□□□□□ -0.31
BRF1-215ENST00000549655 H3BNG1 76 aa13.13□□□□□ -0.31
BRF1-215ENST00000549655 K7EIL1 84 aa13.13□□□□□ -0.31
BRF1-215ENST00000549655 KPRPQ5T749 579 aaPredicted RBP13.12□□□□□ -0.31
BRF1-215ENST00000549655 LYPD5Q6UWN5 251 aa13.12□□□□□ -0.31
BRF1-215ENST00000549655 TOMM7Q9P0U1 55 aa13.12□□□□□ -0.31
BRF1-215ENST00000549655 NBEAL1Q6ZS30 2694 aa13.12□□□□□ -0.31
BRF1-215ENST00000549655 TSPAN13O95857 204 aa13.12□□□□□ -0.31
BRF1-215ENST00000549655 NANOS2P60321 138 aaKnown RBP13.12□□□□□ -0.31
BRF1-215ENST00000549655 NPC2P61916 151 aa13.12□□□□□ -0.31
BRF1-215ENST00000549655 HERV-K104P63124 156 aa13.12□□□□□ -0.31
BRF1-215ENST00000549655 DAND5Q8N907 189 aa13.12□□□□□ -0.31
BRF1-215ENST00000549655 C11orf45Q8TAV5 145 aa13.12□□□□□ -0.31
BRF1-215ENST00000549655 PRO1854Q9UHT4 67 aa13.12□□□□□ -0.31
BRF1-215ENST00000549655 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.11□□□□□ -0.31
BRF1-215ENST00000549655 EIF4EBP3O60516 100 aaPredicted RBP13.11□□□□□ -0.31
BRF1-215ENST00000549655 MDFIQ99750 246 aa13.11□□□□□ -0.31
BRF1-215ENST00000549655 REG3AQ06141 175 aa13.11□□□□□ -0.31
BRF1-215ENST00000549655 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
BRF1-215ENST00000549655 A0A0B4J2C4 111 aa13.1□□□□□ -0.31
BRF1-215ENST00000549655 SPATA25Q9BR10 227 aa13.1□□□□□ -0.31
BRF1-215ENST00000549655 A0A0U1RRA0 63 aa13.09□□□□□ -0.31
BRF1-215ENST00000549655 IFITM1P13164 125 aa13.09□□□□□ -0.31
BRF1-215ENST00000549655 MEIG1Q5JSS6 88 aa13.09□□□□□ -0.31
BRF1-215ENST00000549655 MRAPQ8TCY5 172 aa13.09□□□□□ -0.31
BRF1-215ENST00000549655 TM2D3Q9BRN9 247 aa13.08□□□□□ -0.32
BRF1-215ENST00000549655 DEFB131BA0A096LNP1 70 aa13.07□□□□□ -0.32
BRF1-215ENST00000549655 CHCHD10Q8WYQ3 142 aaPredicted RBP13.07□□□□□ -0.32
BRF1-215ENST00000549655 IGLV10-54A0A075B6I4 117 aa13.07□□□□□ -0.32
BRF1-215ENST00000549655 CD164L2Q6UWJ8 174 aa13.07□□□□□ -0.32
BRF1-215ENST00000549655 MGAM2Q2M2H8 2515 aa13.06□□□□□ -0.32
BRF1-215ENST00000549655 SFTA2Q6UW10 78 aa13.06□□□□□ -0.32
BRF1-215ENST00000549655 IGHV3-33P01772 117 aa13.05□□□□□ -0.32
BRF1-215ENST00000549655 LINC00308Q8TCZ7 52 aa13.05□□□□□ -0.32
BRF1-215ENST00000549655 LOC107984156A0A0G2JMH3 177 aa13.05□□□□□ -0.32
BRF1-215ENST00000549655 ARL17AQ8IVW1 177 aa13.05□□□□□ -0.32
BRF1-215ENST00000549655 LINC01561Q8N1V8 128 aa13.05□□□□□ -0.32
BRF1-215ENST00000549655 KLK12Q9UKR0 248 aa13.04□□□□□ -0.32
BRF1-215ENST00000549655 ERG28Q9UKR5 140 aa13.04□□□□□ -0.32
BRF1-215ENST00000549655 COX7A2LO14548 114 aa13.03□□□□□ -0.32
BRF1-215ENST00000549655 C6orf226Q5I0X4 101 aa13.03□□□□□ -0.32
BRF1-215ENST00000549655 PRR34Q9NV39 138 aa13.03□□□□□ -0.32
BRF1-215ENST00000549655 H7C2G1 150 aa13.02□□□□□ -0.32
BRF1-215ENST00000549655 COPS9Q8WXC6 57 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms