RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 SNHG12Q9BXW3 62 aa1.33□□□□□ -2.2
PRIM1-204ENST00000549549 ATOX1O00244 68 aa1.32□□□□□ -2.2
PRIM1-204ENST00000549549 S100A3P33764 101 aa1.32□□□□□ -2.2
PRIM1-204ENST00000549549 ANKRD26Q9UPS8 1709 aa1.32□□□□□ -2.2
PRIM1-204ENST00000549549 CACFD1Q9UGQ2 172 aa1.31□□□□□ -2.2
PRIM1-204ENST00000549549 PRO0255Q9UI72 69 aa1.31□□□□□ -2.2
PRIM1-204ENST00000549549 SPCS1Q9Y6A9 102 aa1.31□□□□□ -2.2
PRIM1-204ENST00000549549 UBA52P62987 128 aaKnown RBP1.3□□□□□ -2.2
PRIM1-204ENST00000549549 FAM208BQ5VWN6 2430 aa1.29□□□□□ -2.2
PRIM1-204ENST00000549549 A0A0G2JND7 137 aa1.29□□□□□ -2.2
PRIM1-204ENST00000549549 A0A1B0GWA3 101 aa1.29□□□□□ -2.2
PRIM1-204ENST00000549549 H7BZZ5 65 aa1.29□□□□□ -2.2
PRIM1-204ENST00000549549 C10orf113Q5VZT2 155 aa1.29□□□□□ -2.2
PRIM1-204ENST00000549549 AKAP12Q02952 1782 aa1.28□□□□□ -2.2
PRIM1-204ENST00000549549 TROQ12816 1431 aaPredicted RBP1.27□□□□□ -2.21
PRIM1-204ENST00000549549 SERP2Q8N6R1 65 aa1.27□□□□□ -2.21
PRIM1-204ENST00000549549 BIVM-ERCC5R4GMW8 1640 aa1.26□□□□□ -2.21
PRIM1-204ENST00000549549 ARHGEF12Q9NZN5 1544 aa1.26□□□□□ -2.21
PRIM1-204ENST00000549549 I3L2K1 104 aa1.26□□□□□ -2.21
PRIM1-204ENST00000549549 POLQO75417 2590 aa1.26□□□□□ -2.21
PRIM1-204ENST00000549549 TNCP24821 2201 aa1.25□□□□□ -2.21
PRIM1-204ENST00000549549 TRBV25-1A0A075B6N4 114 aa1.25□□□□□ -2.21
PRIM1-204ENST00000549549 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
PRIM1-204ENST00000549549 TRGV9Q99603 122 aa1.25□□□□□ -2.21
PRIM1-204ENST00000549549 LINC00846Q9NV44 126 aa1.25□□□□□ -2.21
PRIM1-204ENST00000549549 ZFHX3Q15911 3703 aa1.25□□□□□ -2.21
PRIM1-204ENST00000549549 NUP188Q5SRE5 1749 aa1.25□□□□□ -2.21
PRIM1-204ENST00000549549 TP53AIP1Q9HCN2 124 aa1.24□□□□□ -2.21
PRIM1-204ENST00000549549 VAMP8Q9BV40 100 aa1.23□□□□□ -2.21
PRIM1-204ENST00000549549 PRO1933Q9H354 126 aa1.22□□□□□ -2.21
PRIM1-204ENST00000549549 C1orf167Q5SNV9 1468 aa1.22□□□□□ -2.21
PRIM1-204ENST00000549549 TRBV7-7A0A0K0K1E9 115 aa1.21□□□□□ -2.22
PRIM1-204ENST00000549549 ABCA12Q86UK0 2595 aa1.21□□□□□ -2.22
PRIM1-204ENST00000549549 TRBV6-1A0A0K0K1D8 114 aa1.2□□□□□ -2.22
PRIM1-204ENST00000549549 PMCHL1Q16048 86 aa1.2□□□□□ -2.22
PRIM1-204ENST00000549549 LINC01600Q96MT4 127 aa1.19□□□□□ -2.22
PRIM1-204ENST00000549549 TENM3Q9P273 2699 aa1.19□□□□□ -2.22
PRIM1-204ENST00000549549 CACNA1CQ13936 2221 aa1.19□□□□□ -2.22
PRIM1-204ENST00000549549 MARF1Q9Y4F3 1742 aaKnown RBP1.18□□□□□ -2.22
PRIM1-204ENST00000549549 Q5BKY6 102 aa1.18□□□□□ -2.22
PRIM1-204ENST00000549549 PIEZO1Q92508 2521 aa1.17□□□□□ -2.22
PRIM1-204ENST00000549549 SYS1-DBNDD2H3BUS1 97 aa1.17□□□□□ -2.22
PRIM1-204ENST00000549549 PAPPAQ13219 1627 aa1.17□□□□□ -2.22
PRIM1-204ENST00000549549 TULP4Q9NRJ4 1543 aa1.16□□□□□ -2.22
PRIM1-204ENST00000549549 UQCRHP07919 91 aa1.16□□□□□ -2.22
PRIM1-204ENST00000549549 PSMG4Q5JS54 123 aa1.16□□□□□ -2.22
PRIM1-204ENST00000549549 Q8IZM0 81 aa1.16□□□□□ -2.22
PRIM1-204ENST00000549549 PLEKHH2Q8IVE3 1493 aa1.16□□□□□ -2.22
PRIM1-204ENST00000549549 CACNA1EQ15878 2313 aa1.16□□□□□ -2.22
PRIM1-204ENST00000549549 ANK2Q01484 3957 aa1.15□□□□□ -2.22
PRIM1-204ENST00000549549 ASIPP42127 132 aa1.15□□□□□ -2.23
PRIM1-204ENST00000549549 LCN9Q8WX39 176 aa1.15□□□□□ -2.23
PRIM1-204ENST00000549549 NRXN1Q9ULB1 1477 aa1.15□□□□□ -2.23
PRIM1-204ENST00000549549 RAPGEF2Q9Y4G8 1499 aa1.15□□□□□ -2.23
PRIM1-204ENST00000549549 MYO7BQ6PIF6 2116 aa1.15□□□□□ -2.23
PRIM1-204ENST00000549549 TPRP12270 2363 aaKnown RBP1.14□□□□□ -2.23
PRIM1-204ENST00000549549 PDCD11Q14690 1871 aaKnown RBP1.14□□□□□ -2.23
PRIM1-204ENST00000549549 TTC37Q6PGP7 1564 aa1.14□□□□□ -2.23
PRIM1-204ENST00000549549 A0A087WVE0 104 aa1.14□□□□□ -2.23
PRIM1-204ENST00000549549 C7orf77A4D0Y5 90 aa1.14□□□□□ -2.23
PRIM1-204ENST00000549549 CELSR2Q9HCU4 2923 aa1.13□□□□□ -2.23
PRIM1-204ENST00000549549 POLA1P09884 1462 aaPredicted RBP1.12□□□□□ -2.23
PRIM1-204ENST00000549549 FAUP35544 74 aaKnown RBP1.11□□□□□ -2.23
PRIM1-204ENST00000549549 FDCSPQ8NFU4 85 aa1.11□□□□□ -2.23
PRIM1-204ENST00000549549 XRN1Q8IZH2 1706 aaKnown RBP1.1□□□□□ -2.23
PRIM1-204ENST00000549549 NLRP1Q9C000 1473 aa1.09□□□□□ -2.24
PRIM1-204ENST00000549549 EPRSP07814 1512 aaKnown RBP1.09□□□□□ -2.24
PRIM1-204ENST00000549549 PIGYQ3MUY2 71 aa1.08□□□□□ -2.24
PRIM1-204ENST00000549549 ABCC2Q92887 1545 aa1.08□□□□□ -2.24
PRIM1-204ENST00000549549 SMARCA2P51531 1590 aa1.08□□□□□ -2.24
PRIM1-204ENST00000549549 NHSL1Q5SYE7 1610 aa1.07□□□□□ -2.24
PRIM1-204ENST00000549549 FANCAO15360 1455 aa1.06□□□□□ -2.24
PRIM1-204ENST00000549549 UQCRHLA0A096LP55 91 aa1.06□□□□□ -2.24
PRIM1-204ENST00000549549 TRBV7-4A0A0J9YYF1 115 aa1.06□□□□□ -2.24
PRIM1-204ENST00000549549 LINC00959A0A1B0GUT2 108 aa1.06□□□□□ -2.24
PRIM1-204ENST00000549549 DEFB123Q8N688 67 aa1.06□□□□□ -2.24
PRIM1-204ENST00000549549 CLTCQ00610 1675 aaKnown RBP1.05□□□□□ -2.24
PRIM1-204ENST00000549549 SPINK1P00995 79 aa1.05□□□□□ -2.24
PRIM1-204ENST00000549549 A0A0G2JMZ2 1700 aa1.03□□□□□ -2.24
PRIM1-204ENST00000549549 CHD9Q3L8U1 2897 aa1.02□□□□□ -2.25
PRIM1-204ENST00000549549 F8P00451 2351 aa1.01□□□□□ -2.25
PRIM1-204ENST00000549549 H3BQF6 201 aa1.01□□□□□ -2.25
PRIM1-204ENST00000549549 GYPAP02724 150 aa1.01□□□□□ -2.25
PRIM1-204ENST00000549549 WFDC2Q14508 124 aa1.01□□□□□ -2.25
PRIM1-204ENST00000549549 AHCTF1Q8WYP5 2266 aa1.01□□□□□ -2.25
PRIM1-204ENST00000549549 BAZ1AQ9NRL2 1556 aaPredicted RBP1□□□□□ -2.25
PRIM1-204ENST00000549549 ARMS2P0C7Q2 107 aa0.99□□□□□ -2.25
PRIM1-204ENST00000549549 MON2Q7Z3U7 1717 aa0.98□□□□□ -2.25
PRIM1-204ENST00000549549 SHPRHQ149N8 1683 aa0.98□□□□□ -2.25
PRIM1-204ENST00000549549 TARBP1Q13395 1621 aaKnown RBP0.98□□□□□ -2.25
PRIM1-204ENST00000549549 ATP10BO94823 1461 aa0.98□□□□□ -2.25
PRIM1-204ENST00000549549 IQSEC2Q5JU85 1478 aa0.98□□□□□ -2.25
PRIM1-204ENST00000549549 H0Y9P7 68 aa0.97□□□□□ -2.25
PRIM1-204ENST00000549549 V9GYS6 101 aa0.97□□□□□ -2.25
PRIM1-204ENST00000549549 KNDC1Q76NI1 1749 aa0.97□□□□□ -2.25
PRIM1-204ENST00000549549 USP24Q9UPU5 2620 aa0.96□□□□□ -2.26
PRIM1-204ENST00000549549 PAPPA2Q9BXP8 1791 aa0.96□□□□□ -2.26
PRIM1-204ENST00000549549 FXYD6-FXYD2A0A087WZ82 144 aa0.95□□□□□ -2.26
PRIM1-204ENST00000549549 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
PRIM1-204ENST00000549549 HMGN3Q15651 99 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms