RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PYGO1Q9Y3Y4 419 aa9.77□□□□□ -0.85
PRPF40B-209ENST00000548825 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.85
PRPF40B-209ENST00000548825 IGLV10-54A0A075B6I4 117 aa9.76□□□□□ -0.85
PRPF40B-209ENST00000548825 XCL1P47992 114 aa9.76□□□□□ -0.85
PRPF40B-209ENST00000548825 MIAQ16674 131 aa9.76□□□□□ -0.85
PRPF40B-209ENST00000548825 CKS1BP61024 79 aa9.75□□□□□ -0.85
PRPF40B-209ENST00000548825 HERVK_113P63121 156 aa9.74□□□□□ -0.85
PRPF40B-209ENST00000548825 Q8N2B8 174 aa9.74□□□□□ -0.85
PRPF40B-209ENST00000548825 IGLV4-60A0A075B6I1 120 aa9.74□□□□□ -0.85
PRPF40B-209ENST00000548825 LITAFQ99732 161 aa9.73□□□□□ -0.85
PRPF40B-209ENST00000548825 ZFAND6Q6FIF0 208 aa9.73□□□□□ -0.85
PRPF40B-209ENST00000548825 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
PRPF40B-209ENST00000548825 CDIP1Q9H305 208 aa9.72□□□□□ -0.85
PRPF40B-209ENST00000548825 NSD1Q96L73 2696 aaPredicted RBP9.72□□□□□ -0.85
PRPF40B-209ENST00000548825 TRRAPQ9Y4A5 3859 aa9.72□□□□□ -0.85
PRPF40B-209ENST00000548825 DEFB135Q30KP9 77 aa9.72□□□□□ -0.85
PRPF40B-209ENST00000548825 TTC32Q5I0X7 151 aa9.72□□□□□ -0.85
PRPF40B-209ENST00000548825 DNAJC30Q96LL9 226 aa9.72□□□□□ -0.85
PRPF40B-209ENST00000548825 Q9HAA7 133 aa9.72□□□□□ -0.85
PRPF40B-209ENST00000548825 GYPEP15421 78 aa9.71□□□□□ -0.85
PRPF40B-209ENST00000548825 BEAN1Q3B7T3 259 aa9.71□□□□□ -0.85
PRPF40B-209ENST00000548825 LRRC75A-AS1Q8N1F1 130 aa9.71□□□□□ -0.85
PRPF40B-209ENST00000548825 SPATA3Q8NHX4 192 aa9.71□□□□□ -0.85
PRPF40B-209ENST00000548825 LINC00308Q8TCZ7 52 aa9.71□□□□□ -0.85
PRPF40B-209ENST00000548825 SMIM1B2RUZ4 78 aa9.71□□□□□ -0.86
PRPF40B-209ENST00000548825 RNASE1P07998 156 aaKnown RBP9.71□□□□□ -0.86
PRPF40B-209ENST00000548825 GIG44P09565 113 aaPredicted RBP9.71□□□□□ -0.86
PRPF40B-209ENST00000548825 MIR7-3HGQ8N6C7 128 aa9.71□□□□□ -0.86
PRPF40B-209ENST00000548825 TRAV8-4A0A0B4J246 113 aa9.7□□□□□ -0.86
PRPF40B-209ENST00000548825 TRAV4A0A0B4J268 109 aa9.7□□□□□ -0.86
PRPF40B-209ENST00000548825 DAZ2Q13117 558 aaKnown RBP9.7□□□□□ -0.86
PRPF40B-209ENST00000548825 DAZ4Q86SG3 579 aaKnown RBP9.7□□□□□ -0.86
PRPF40B-209ENST00000548825 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
PRPF40B-209ENST00000548825 DAZ3Q9NR90 486 aaKnown RBP9.7□□□□□ -0.86
PRPF40B-209ENST00000548825 CDC42SE2Q9NRR3 84 aa9.7□□□□□ -0.86
PRPF40B-209ENST00000548825 PAX4O43316 350 aa9.7□□□□□ -0.86
PRPF40B-209ENST00000548825 SNCGO76070 127 aa9.7□□□□□ -0.86
PRPF40B-209ENST00000548825 SPATA25Q9BR10 227 aa9.69□□□□□ -0.86
PRPF40B-209ENST00000548825 FBN1P35555 2871 aaKnown RBP9.69□□□□□ -0.86
PRPF40B-209ENST00000548825 C6orf226Q5I0X4 101 aa9.69□□□□□ -0.86
PRPF40B-209ENST00000548825 SOSTDC1Q6X4U4 206 aa9.69□□□□□ -0.86
PRPF40B-209ENST00000548825 Q8N3U1 123 aa9.68□□□□□ -0.86
PRPF40B-209ENST00000548825 C16orf74Q96GX8 76 aa9.68□□□□□ -0.86
PRPF40B-209ENST00000548825 H7C423 109 aa9.68□□□□□ -0.86
PRPF40B-209ENST00000548825 J3QKU1 62 aa9.68□□□□□ -0.86
PRPF40B-209ENST00000548825 LINC00526Q96FQ7 95 aa9.68□□□□□ -0.86
PRPF40B-209ENST00000548825 INAFM1C9JVW0 142 aa9.67□□□□□ -0.86
PRPF40B-209ENST00000548825 TRAV25A0A0B4J276 109 aa9.67□□□□□ -0.86
PRPF40B-209ENST00000548825 NDUFA1O15239 70 aa9.67□□□□□ -0.86
PRPF40B-209ENST00000548825 ATP5G1P05496 136 aa9.67□□□□□ -0.86
PRPF40B-209ENST00000548825 PKD1L1Q8TDX9 2849 aa9.67□□□□□ -0.86
PRPF40B-209ENST00000548825 CRYBA4P53673 196 aa9.66□□□□□ -0.86
PRPF40B-209ENST00000548825 TEX29Q8N6K0 151 aa9.66□□□□□ -0.86
PRPF40B-209ENST00000548825 TRBV10-2A0A0K0K1G8 114 aa9.66□□□□□ -0.86
PRPF40B-209ENST00000548825 IGLV1-51P01701 117 aa9.66□□□□□ -0.86
PRPF40B-209ENST00000548825 TRBV10-1A0A0K0K1A3 114 aa9.65□□□□□ -0.86
PRPF40B-209ENST00000548825 TMEM86BQ8N661 226 aa9.65□□□□□ -0.86
PRPF40B-209ENST00000548825 ANAPC13Q9BS18 74 aa9.65□□□□□ -0.86
PRPF40B-209ENST00000548825 TRAV26-1A0A087WT03 109 aa9.65□□□□□ -0.86
PRPF40B-209ENST00000548825 TIRAPP58753 221 aa9.65□□□□□ -0.86
PRPF40B-209ENST00000548825 C15orf53Q8NAA6 179 aa9.65□□□□□ -0.86
PRPF40B-209ENST00000548825 TRBV30A0A0K0K1B3 111 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 CRPP02741 224 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 COX7B2Q8TF08 81 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 SPANXDQ9BXN6 97 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 SND1-IT1Q9HBX3 110 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 SPANXCQ9NY87 97 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 GAGE2BQ13066 116 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 GAGE2EQ4V326 116 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 FAM222AQ5U5X8 452 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 GAGE2DQ9UEU5 116 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 COL6A5A8TX70 2615 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 A8MTW9 85 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 PRR3P79522 188 aaKnown RBP9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 ATP6V0E2Q8NHE4 81 aa9.64□□□□□ -0.87
PRPF40B-209ENST00000548825 TRBV6-8A0A0A6YYG3 113 aa9.63□□□□□ -0.87
PRPF40B-209ENST00000548825 C3orf56Q8N813 242 aa9.63□□□□□ -0.87
PRPF40B-209ENST00000548825 F5H768 121 aa9.63□□□□□ -0.87
PRPF40B-209ENST00000548825 ANGP03950 147 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-209ENST00000548825 PLAC8L1A1L4L8 177 aa9.62□□□□□ -0.87
PRPF40B-209ENST00000548825 KRTAP1-1Q07627 177 aa9.62□□□□□ -0.87
PRPF40B-209ENST00000548825 FHL2Q14192 279 aa9.62□□□□□ -0.87
PRPF40B-209ENST00000548825 MGAM2Q2M2H8 2515 aa9.62□□□□□ -0.87
PRPF40B-209ENST00000548825 SLPIP03973 132 aa9.62□□□□□ -0.87
PRPF40B-209ENST00000548825 LY6G6DO95868 133 aa9.61□□□□□ -0.87
PRPF40B-209ENST00000548825 KRTAP10-3P60369 221 aa9.61□□□□□ -0.87
PRPF40B-209ENST00000548825 RNF183Q96D59 192 aa9.61□□□□□ -0.87
PRPF40B-209ENST00000548825 DNAL4O96015 105 aa9.61□□□□□ -0.87
PRPF40B-209ENST00000548825 LINC00269Q8N2A0 174 aa9.61□□□□□ -0.87
PRPF40B-209ENST00000548825 BAALC-AS2P0C853 105 aa9.6□□□□□ -0.87
PRPF40B-209ENST00000548825 IFITM1P13164 125 aa9.6□□□□□ -0.87
PRPF40B-209ENST00000548825 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
PRPF40B-209ENST00000548825 C19orf73Q9NVV2 129 aa9.6□□□□□ -0.87
PRPF40B-209ENST00000548825 LST1O00453 97 aa9.59□□□□□ -0.87
PRPF40B-209ENST00000548825 HILS1P60008 231 aa9.59□□□□□ -0.87
PRPF40B-209ENST00000548825 GAGE2AQ6NT46 116 aa9.59□□□□□ -0.87
PRPF40B-209ENST00000548825 MALP21145 153 aa9.59□□□□□ -0.87
PRPF40B-209ENST00000548825 EDA2RQ9HAV5 297 aa9.59□□□□□ -0.87
PRPF40B-209ENST00000548825 FAM218AQ96MZ4 157 aa9.59□□□□□ -0.87
PRPF40B-209ENST00000548825 IGLV5-39A0A0G2JS06 123 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 526.3 ms