RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 CHD8Q9HCK8 2581 aa-0.07□□□□□ -2.42
RPAP3-206ENST00000548296 SHANK2Q9UPX8 1470 aa-0.08□□□□□ -2.42
RPAP3-206ENST00000548296 I3L2K1 104 aa-0.08□□□□□ -2.42
RPAP3-206ENST00000548296 CORTO00230 105 aa-0.08□□□□□ -2.42
RPAP3-206ENST00000548296 SNAPC5O75971 98 aa-0.08□□□□□ -2.42
RPAP3-206ENST00000548296 SFT2D2O95562 160 aa-0.08□□□□□ -2.42
RPAP3-206ENST00000548296 GNG4P50150 75 aa-0.08□□□□□ -2.42
RPAP3-206ENST00000548296 C2orf88Q9BSF0 95 aa-0.08□□□□□ -2.42
RPAP3-206ENST00000548296 CDC42SE2Q9NRR3 84 aa-0.08□□□□□ -2.42
RPAP3-206ENST00000548296 AKAP6Q13023 2319 aa-0.08□□□□□ -2.42
RPAP3-206ENST00000548296 PPRC1Q5VV67 1664 aaKnown RBP-0.08□□□□□ -2.42
RPAP3-206ENST00000548296 ARHGEF5Q12774 1597 aa-0.09□□□□□ -2.42
RPAP3-206ENST00000548296 C10orf71Q711Q0 1435 aa-0.09□□□□□ -2.42
RPAP3-206ENST00000548296 PKDREJQ9NTG1 2253 aa-0.09□□□□□ -2.42
RPAP3-206ENST00000548296 FAM24AA6NFZ4 105 aa-0.09□□□□□ -2.42
RPAP3-206ENST00000548296 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.09□□□□□ -2.42
RPAP3-206ENST00000548296 DEFB109BQ30KR1 87 aa-0.1□□□□□ -2.43
RPAP3-206ENST00000548296 TMEM203Q969S6 136 aa-0.1□□□□□ -2.43
RPAP3-206ENST00000548296 FAM167A-AS1Q96KT0 104 aa-0.1□□□□□ -2.43
RPAP3-206ENST00000548296 USF3Q68DE3 2245 aa-0.1□□□□□ -2.43
RPAP3-206ENST00000548296 ACACBO00763 2458 aa-0.11□□□□□ -2.43
RPAP3-206ENST00000548296 PAPPAQ13219 1627 aa-0.11□□□□□ -2.43
RPAP3-206ENST00000548296 CHKB-CPT1BH3BT56 60 aa-0.11□□□□□ -2.43
RPAP3-206ENST00000548296 PPP3R1P63098 170 aa-0.11□□□□□ -2.43
RPAP3-206ENST00000548296 DCDP81605 110 aaKnown RBP-0.11□□□□□ -2.43
RPAP3-206ENST00000548296 SPRR4Q96PI1 79 aa-0.11□□□□□ -2.43
RPAP3-206ENST00000548296 TENM2Q9NT68 2774 aa-0.11□□□□□ -2.43
RPAP3-206ENST00000548296 BTAF1O14981 1849 aa-0.11□□□□□ -2.43
RPAP3-206ENST00000548296 TET3O43151 1660 aa-0.11□□□□□ -2.43
RPAP3-206ENST00000548296 MAPKBP1O60336 1514 aa-0.12□□□□□ -2.43
RPAP3-206ENST00000548296 ZANQ9Y493 2812 aa-0.12□□□□□ -2.43
RPAP3-206ENST00000548296 FAT3Q8TDW7 4589 aa-0.12□□□□□ -2.43
RPAP3-206ENST00000548296 F6UZH7 168 aa-0.12□□□□□ -2.43
RPAP3-206ENST00000548296 MGPP08493 103 aa-0.12□□□□□ -2.43
RPAP3-206ENST00000548296 UQCR10Q9UDW1 63 aa-0.12□□□□□ -2.43
RPAP3-206ENST00000548296 WDR7Q9Y4E6 1490 aa-0.12□□□□□ -2.43
RPAP3-206ENST00000548296 HMGXB3Q12766 1538 aa-0.13□□□□□ -2.43
RPAP3-206ENST00000548296 NRKQ7Z2Y5 1582 aa-0.13□□□□□ -2.43
RPAP3-206ENST00000548296 MYCBP2O75592 4640 aa-0.13□□□□□ -2.43
RPAP3-206ENST00000548296 SPRR1AP35321 89 aa-0.13□□□□□ -2.43
RPAP3-206ENST00000548296 TMEM263Q8WUH6 116 aaKnown RBP-0.13□□□□□ -2.43
RPAP3-206ENST00000548296 NXT2Q9NPJ8 142 aaKnown RBP-0.13□□□□□ -2.43
RPAP3-206ENST00000548296 ANKRD11Q6UB99 2663 aaPredicted RBP-0.13□□□□□ -2.43
RPAP3-206ENST00000548296 SCAPERQ9BY12 1400 aa-0.13□□□□□ -2.43
RPAP3-206ENST00000548296 BPTFQ12830 3046 aa-0.13□□□□□ -2.43
RPAP3-206ENST00000548296 GNG11P61952 73 aa-0.14□□□□□ -2.43
RPAP3-206ENST00000548296 WHAMMP3Q1A5X7 153 aa-0.14□□□□□ -2.43
RPAP3-206ENST00000548296 PIGYQ3MUY2 71 aa-0.14□□□□□ -2.43
RPAP3-206ENST00000548296 SVBPQ8N300 66 aa-0.14□□□□□ -2.43
RPAP3-206ENST00000548296 PDZD2O15018 2839 aa-0.14□□□□□ -2.43
RPAP3-206ENST00000548296 MGAM2Q2M2H8 2515 aa-0.15□□□□□ -2.43
RPAP3-206ENST00000548296 USP9XQ93008 2570 aaPredicted RBP-0.15□□□□□ -2.43
RPAP3-206ENST00000548296 COL12A1Q99715 3063 aa-0.15□□□□□ -2.43
RPAP3-206ENST00000548296 TRBV6-1A0A0K0K1D8 114 aa-0.15□□□□□ -2.43
RPAP3-206ENST00000548296 LINC00587B1AMM8 73 aa-0.15□□□□□ -2.43
RPAP3-206ENST00000548296 IGLC1P0CG04 106 aa-0.15□□□□□ -2.43
RPAP3-206ENST00000548296 GNG8Q9UK08 70 aa-0.15□□□□□ -2.43
RPAP3-206ENST00000548296 ZFHX3Q15911 3703 aa-0.15□□□□□ -2.43
RPAP3-206ENST00000548296 KDM5AP29375 1690 aaKnown RBP-0.15□□□□□ -2.43
RPAP3-206ENST00000548296 KMT2AQ03164 3969 aa-0.15□□□□□ -2.43
RPAP3-206ENST00000548296 HERC2O95714 4834 aa-0.16□□□□□ -2.43
RPAP3-206ENST00000548296 FLNCQ14315 2725 aa-0.16□□□□□ -2.43
RPAP3-206ENST00000548296 H3BQ15 152 aa-0.16□□□□□ -2.44
RPAP3-206ENST00000548296 MRPS10P82664 201 aaKnown RBP-0.16□□□□□ -2.44
RPAP3-206ENST00000548296 FAIMQ9NVQ4 179 aa-0.16□□□□□ -2.44
RPAP3-206ENST00000548296 NSD3Q9BZ95 1437 aa-0.16□□□□□ -2.44
RPAP3-206ENST00000548296 DIP2CQ9Y2E4 1556 aa-0.16□□□□□ -2.44
RPAP3-206ENST00000548296 SETXQ7Z333 2677 aaKnown RBP-0.16□□□□□ -2.44
RPAP3-206ENST00000548296 PZPP20742 1482 aa-0.16□□□□□ -2.44
RPAP3-206ENST00000548296 EHBP1L1Q8N3D4 1523 aa-0.17□□□□□ -2.44
RPAP3-206ENST00000548296 FAM135AQ9P2D6 1515 aa-0.17□□□□□ -2.44
RPAP3-206ENST00000548296 UBE2D3P61077 147 aa-0.17□□□□□ -2.44
RPAP3-206ENST00000548296 UBE2D2P62837 147 aa-0.17□□□□□ -2.44
RPAP3-206ENST00000548296 GOLGA4Q13439 2230 aaKnown RBP-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 EPG5Q9HCE0 2579 aa-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 S100A1P23297 94 aa-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 Q0VG73 95 aa-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 DEFB123Q8N688 67 aa-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 ARL2-SNX15V9GYD0 113 aa-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 MAP1BP46821 2468 aaKnown RBP-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 PKD1L1Q8TDX9 2849 aa-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 CHD6Q8TD26 2715 aa-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 LPAP08519 4548 aa-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 USP9YO00507 2555 aaPredicted RBP-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 MYO18BQ8IUG5 2567 aa-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 SPHKAPQ2M3C7 1700 aa-0.18□□□□□ -2.44
RPAP3-206ENST00000548296 SPTBN1Q01082 2364 aaKnown RBP-0.19□□□□□ -2.44
RPAP3-206ENST00000548296 NAP1L6A6NFF2 107 aa-0.19□□□□□ -2.44
RPAP3-206ENST00000548296 KRTAP6-1Q3LI64 71 aa-0.19□□□□□ -2.44
RPAP3-206ENST00000548296 FAM223AQ8IWN6 122 aa-0.19□□□□□ -2.44
RPAP3-206ENST00000548296 ARHGEF12Q9NZN5 1544 aa-0.19□□□□□ -2.44
RPAP3-206ENST00000548296 SRRM2Q9UQ35 2752 aaKnown RBP-0.2□□□□□ -2.44
RPAP3-206ENST00000548296 MRC2Q9UBG0 1479 aa-0.2□□□□□ -2.44
RPAP3-206ENST00000548296 LRP2P98164 4655 aa-0.2□□□□□ -2.44
RPAP3-206ENST00000548296 ATRQ13535 2644 aa-0.2□□□□□ -2.44
RPAP3-206ENST00000548296 COX6CP09669 75 aa-0.2□□□□□ -2.44
RPAP3-206ENST00000548296 C10orf113Q5VZT2 155 aa-0.2□□□□□ -2.44
RPAP3-206ENST00000548296 MANBALQ9NQG1 85 aa-0.2□□□□□ -2.44
RPAP3-206ENST00000548296 ARHGAP5Q13017 1502 aa-0.2□□□□□ -2.44
RPAP3-206ENST00000548296 TULP4Q9NRJ4 1543 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms