RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 DNAJC30Q96LL9 226 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 IGHV3-30P01768 117 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 IGHV3-30-5P0DP03 117 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 FHL2Q14192 279 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 C9orf66Q5T8R8 295 aa9□□□□□ -0.97
SCAF11-209ENST00000547018 XCL1P47992 114 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 MRPS36P82909 103 aaKnown RBP8.99□□□□□ -0.97
SCAF11-209ENST00000547018 DAZ2Q13117 558 aaKnown RBP8.99□□□□□ -0.97
SCAF11-209ENST00000547018 LINC00242Q5T6M2 205 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 PRIMA1Q86XR5 153 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 RETNQ9HD89 108 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 IGHV1-58A0A0C4DH39 117 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 A0A1B0GWB2 263 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 G3V4G9 280 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 TSPAN13O95857 204 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 VSIG2Q96IQ7 327 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 PYGO1Q9Y3Y4 419 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 UBE2D1P51668 147 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 TAL2Q16559 108 aa8.99□□□□□ -0.97
SCAF11-209ENST00000547018 DAZ4Q86SG3 579 aaKnown RBP8.98□□□□□ -0.97
SCAF11-209ENST00000547018 DAZ3Q9NR90 486 aaKnown RBP8.98□□□□□ -0.97
SCAF11-209ENST00000547018 TEX48A0A1B0GUV7 120 aa8.98□□□□□ -0.97
SCAF11-209ENST00000547018 PAX4O43316 350 aa8.97□□□□□ -0.97
SCAF11-209ENST00000547018 DAD1P61803 113 aa8.97□□□□□ -0.97
SCAF11-209ENST00000547018 C3orf56Q8N813 242 aa8.97□□□□□ -0.97
SCAF11-209ENST00000547018 IGHV4-28A0A0C4DH34 117 aa8.97□□□□□ -0.97
SCAF11-209ENST00000547018 CELA1Q9UNI1 258 aa8.97□□□□□ -0.97
SCAF11-209ENST00000547018 TRBV10-1A0A0K0K1A3 114 aa8.96□□□□□ -0.97
SCAF11-209ENST00000547018 PFN2P35080 140 aa8.96□□□□□ -0.97
SCAF11-209ENST00000547018 PRO1854Q9UHT4 67 aa8.96□□□□□ -0.97
SCAF11-209ENST00000547018 TINCRA0A1B0GVN0 87 aa8.96□□□□□ -0.98
SCAF11-209ENST00000547018 ATP6V0E2Q8NHE4 81 aa8.96□□□□□ -0.98
SCAF11-209ENST00000547018 X6R8D5 127 aa8.96□□□□□ -0.98
SCAF11-209ENST00000547018 CDC42SE2Q9NRR3 84 aa8.95□□□□□ -0.98
SCAF11-209ENST00000547018 IL17DQ8TAD2 202 aa8.95□□□□□ -0.98
SCAF11-209ENST00000547018 IGHV4-30-4P0DP06 118 aa8.95□□□□□ -0.98
SCAF11-209ENST00000547018 ERG28Q9UKR5 140 aa8.95□□□□□ -0.98
SCAF11-209ENST00000547018 TRBV6-8A0A0A6YYG3 113 aa8.94□□□□□ -0.98
SCAF11-209ENST00000547018 INSL3P51460 131 aa8.94□□□□□ -0.98
SCAF11-209ENST00000547018 SIGMAR1Q99720 223 aa8.94□□□□□ -0.98
SCAF11-209ENST00000547018 PIK3CD-AS1Q5SR53 167 aa8.94□□□□□ -0.98
SCAF11-209ENST00000547018 TRBV6-4A0A1B0GX49 114 aa8.93□□□□□ -0.98
SCAF11-209ENST00000547018 HERVK_113P63121 156 aa8.93□□□□□ -0.98
SCAF11-209ENST00000547018 LINC00526Q96FQ7 95 aa8.93□□□□□ -0.98
SCAF11-209ENST00000547018 TCL1BO95988 128 aa8.92□□□□□ -0.98
SCAF11-209ENST00000547018 MRAPQ8TCY5 172 aa8.92□□□□□ -0.98
SCAF11-209ENST00000547018 ANGP03950 147 aaKnown RBP8.92□□□□□ -0.98
SCAF11-209ENST00000547018 LINC00158P58513 81 aa8.92□□□□□ -0.98
SCAF11-209ENST00000547018 OVOL2Q9BRP0 275 aa8.92□□□□□ -0.98
SCAF11-209ENST00000547018 SMIM20Q8N5G0 67 aa8.91□□□□□ -0.98
SCAF11-209ENST00000547018 STAB2Q8WWQ8 2551 aa8.91□□□□□ -0.98
SCAF11-209ENST00000547018 CYSRT1A8MQ03 144 aa8.91□□□□□ -0.98
SCAF11-209ENST00000547018 SMIM1B2RUZ4 78 aa8.91□□□□□ -0.98
SCAF11-209ENST00000547018 C9JAW5 83 aa8.91□□□□□ -0.98
SCAF11-209ENST00000547018 CIRBPQ14011 172 aaKnown RBP8.91□□□□□ -0.98
SCAF11-209ENST00000547018 KRTAP24-1Q3LI83 254 aa8.91□□□□□ -0.98
SCAF11-209ENST00000547018 PRO0255Q9UI72 69 aa8.91□□□□□ -0.98
SCAF11-209ENST00000547018 APOC4P55056 127 aa8.9□□□□□ -0.98
SCAF11-209ENST00000547018 LINC00269Q8N2A0 174 aa8.9□□□□□ -0.98
SCAF11-209ENST00000547018 EDA2RQ9HAV5 297 aa8.9□□□□□ -0.98
SCAF11-209ENST00000547018 CLEC2BQ92478 149 aa8.9□□□□□ -0.99
SCAF11-209ENST00000547018 C2orf82Q6UX34 121 aa8.89□□□□□ -0.99
SCAF11-209ENST00000547018 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
SCAF11-209ENST00000547018 IGHV3-33P01772 117 aa8.88□□□□□ -0.99
SCAF11-209ENST00000547018 RPL13AP40429 203 aaKnown RBP8.88□□□□□ -0.99
SCAF11-209ENST00000547018 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
SCAF11-209ENST00000547018 SPANXB1Q9NS25 103 aaPredicted RBP8.88□□□□□ -0.99
SCAF11-209ENST00000547018 TENM2Q9NT68 2774 aa8.88□□□□□ -0.99
SCAF11-209ENST00000547018 SCGB1A1P11684 91 aa8.87□□□□□ -0.99
SCAF11-209ENST00000547018 LITAFQ99732 161 aa8.87□□□□□ -0.99
SCAF11-209ENST00000547018 TIRAPP58753 221 aa8.86□□□□□ -0.99
SCAF11-209ENST00000547018 DEFB121Q5J5C9 76 aa8.86□□□□□ -0.99
SCAF11-209ENST00000547018 SBSPONQ8IVN8 264 aa8.86□□□□□ -0.99
SCAF11-209ENST00000547018 MIAQ16674 131 aa8.86□□□□□ -0.99
SCAF11-209ENST00000547018 OR13C6PQ8NH95 151 aa8.86□□□□□ -0.99
SCAF11-209ENST00000547018 ATP5G1P05496 136 aa8.86□□□□□ -0.99
SCAF11-209ENST00000547018 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
SCAF11-209ENST00000547018 TRIAP1O43715 76 aa8.85□□□□□ -0.99
SCAF11-209ENST00000547018 KLK12Q9UKR0 248 aa8.85□□□□□ -0.99
SCAF11-209ENST00000547018 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.85□□□□□ -0.99
SCAF11-209ENST00000547018 KRTAP10-11P60412 298 aa8.85□□□□□ -0.99
SCAF11-209ENST00000547018 COX7B2Q8TF08 81 aa8.85□□□□□ -0.99
SCAF11-209ENST00000547018 LINC00959A0A1B0GUT2 108 aa8.84□□□□□ -0.99
SCAF11-209ENST00000547018 SPART-AS1P0CW21 52 aa8.84□□□□□ -0.99
SCAF11-209ENST00000547018 SOSTDC1Q6X4U4 206 aa8.84□□□□□ -0.99
SCAF11-209ENST00000547018 KIR2DL5BQ8NHK3 375 aa8.84□□□□□ -0.99
SCAF11-209ENST00000547018 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
SCAF11-209ENST00000547018 B5MCH6 92 aa8.84□□□□□ -0.99
SCAF11-209ENST00000547018 GAGE12HA6NDE8 117 aa8.83□□□□□ -1
SCAF11-209ENST00000547018 F8W1H4 67 aa8.83□□□□□ -1
SCAF11-209ENST00000547018 NDUFA1O15239 70 aa8.83□□□□□ -1
SCAF11-209ENST00000547018 MALP21145 153 aa8.83□□□□□ -1
SCAF11-209ENST00000547018 SMCPP49901 116 aaPredicted RBP8.83□□□□□ -1
SCAF11-209ENST00000547018 C9orf116Q5BN46 136 aaPredicted RBP8.83□□□□□ -1
SCAF11-209ENST00000547018 SS18Q15532 418 aa8.83□□□□□ -1
SCAF11-209ENST00000547018 LYRM7Q5U5X0 104 aa8.82□□□□□ -1
SCAF11-209ENST00000547018 RNF183Q96D59 192 aa8.82□□□□□ -1
SCAF11-209ENST00000547018 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
SCAF11-209ENST00000547018 Q8NAQ8 132 aa8.81□□□□□ -1
SCAF11-209ENST00000547018 UBE2WQ96B02 151 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms