RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SND1-IT1Q9HBX3 110 aa6.19□□□□□ -1.42
TDP1-204ENST00000545686 PKD1L2Q7Z442 2459 aa6.19□□□□□ -1.42
TDP1-204ENST00000545686 FLNCQ14315 2725 aa6.19□□□□□ -1.42
TDP1-204ENST00000545686 CFAP46Q8IYW2 2715 aa6.19□□□□□ -1.42
TDP1-204ENST00000545686 LINC00337Q8N6G1 96 aa6.19□□□□□ -1.42
TDP1-204ENST00000545686 USP9YO00507 2555 aaPredicted RBP6.18□□□□□ -1.42
TDP1-204ENST00000545686 IGKV2-28A0A075B6P5 120 aa6.18□□□□□ -1.42
TDP1-204ENST00000545686 IBA57-AS1B1ANH7 110 aa6.18□□□□□ -1.42
TDP1-204ENST00000545686 UQCRQO14949 82 aa6.18□□□□□ -1.42
TDP1-204ENST00000545686 DNAL4O96015 105 aa6.18□□□□□ -1.42
TDP1-204ENST00000545686 IGKV2D-28P01615 120 aa6.18□□□□□ -1.42
TDP1-204ENST00000545686 C3orf22Q8N5N4 141 aa6.18□□□□□ -1.42
TDP1-204ENST00000545686 AKAP9Q99996 3911 aa6.17□□□□□ -1.42
TDP1-204ENST00000545686 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
TDP1-204ENST00000545686 SMIM20Q8N5G0 67 aa6.17□□□□□ -1.42
TDP1-204ENST00000545686 OBSCN-AS1Q96MR7 158 aa6.17□□□□□ -1.42
TDP1-204ENST00000545686 NOP10Q9NPE3 64 aaKnown RBP6.17□□□□□ -1.42
TDP1-204ENST00000545686 PLAC8L1A1L4L8 177 aa6.17□□□□□ -1.42
TDP1-204ENST00000545686 HIST1H4AP62805 103 aaKnown RBP6.17□□□□□ -1.42
TDP1-204ENST00000545686 SMIM11BQ8TCY0 68 aa6.17□□□□□ -1.42
TDP1-204ENST00000545686 UTP20O75691 2785 aaKnown RBP6.16□□□□□ -1.42
TDP1-204ENST00000545686 A0A087WZ39 114 aa6.16□□□□□ -1.42
TDP1-204ENST00000545686 IGHV3OR16-9A0A0B4J2B5 98 aa6.16□□□□□ -1.42
TDP1-204ENST00000545686 LINC00526Q96FQ7 95 aa6.16□□□□□ -1.42
TDP1-204ENST00000545686 Q9HAA7 133 aa6.16□□□□□ -1.42
TDP1-204ENST00000545686 MYO9AB2RTY4 2548 aa6.16□□□□□ -1.42
TDP1-204ENST00000545686 TRGV2A0A075B6R0 118 aa6.16□□□□□ -1.42
TDP1-204ENST00000545686 CCL18P55774 89 aa6.16□□□□□ -1.42
TDP1-204ENST00000545686 LINC00158P58513 81 aa6.16□□□□□ -1.42
TDP1-204ENST00000545686 C9orf153Q5TBE3 101 aa6.16□□□□□ -1.42
TDP1-204ENST00000545686 LRRC75A-AS1Q8N1F1 130 aa6.16□□□□□ -1.42
TDP1-204ENST00000545686 A0A087WYN8 130 aa6.15□□□□□ -1.42
TDP1-204ENST00000545686 TRBV6-8A0A0A6YYG3 113 aa6.15□□□□□ -1.42
TDP1-204ENST00000545686 CCL24O00175 119 aa6.15□□□□□ -1.42
TDP1-204ENST00000545686 ATOX1O00244 68 aa6.15□□□□□ -1.42
TDP1-204ENST00000545686 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.42
TDP1-204ENST00000545686 LY6G6DO95868 133 aa6.15□□□□□ -1.43
TDP1-204ENST00000545686 GIG44P09565 113 aaPredicted RBP6.15□□□□□ -1.43
TDP1-204ENST00000545686 WNK1Q9H4A3 2382 aa6.14□□□□□ -1.43
TDP1-204ENST00000545686 Q6JHZ5 121 aa6.14□□□□□ -1.43
TDP1-204ENST00000545686 KLK5Q9Y337 293 aaPredicted RBP6.14□□□□□ -1.43
TDP1-204ENST00000545686 CHD6Q8TD26 2715 aa6.14□□□□□ -1.43
TDP1-204ENST00000545686 TRGV4A0A0C4DH28 118 aa6.14□□□□□ -1.43
TDP1-204ENST00000545686 LOC100131303A0A0U1RQF7 123 aa6.14□□□□□ -1.43
TDP1-204ENST00000545686 COX7CP15954 63 aa6.14□□□□□ -1.43
TDP1-204ENST00000545686 IGLV4-60A0A075B6I1 120 aa6.13□□□□□ -1.43
TDP1-204ENST00000545686 FBN2P35556 2912 aa6.13□□□□□ -1.43
TDP1-204ENST00000545686 DEFB113Q30KQ7 82 aa6.13□□□□□ -1.43
TDP1-204ENST00000545686 IGSF10Q6WRI0 2623 aa6.13□□□□□ -1.43
TDP1-204ENST00000545686 TEX15Q9BXT5 2789 aa6.13□□□□□ -1.43
TDP1-204ENST00000545686 CSMD2Q7Z408 3487 aa6.13□□□□□ -1.43
TDP1-204ENST00000545686 C11orf44Q8N8P7 122 aa6.13□□□□□ -1.43
TDP1-204ENST00000545686 A0A1B0GX51 115 aa6.12□□□□□ -1.43
TDP1-204ENST00000545686 CRYGAP11844 174 aa6.12□□□□□ -1.43
TDP1-204ENST00000545686 FHL2Q14192 279 aa6.12□□□□□ -1.43
TDP1-204ENST00000545686 LINC01561Q8N1V8 128 aa6.12□□□□□ -1.43
TDP1-204ENST00000545686 CSNK1G2-AS1Q8NCQ2 148 aa6.12□□□□□ -1.43
TDP1-204ENST00000545686 C14orf132Q9NPU4 83 aa6.12□□□□□ -1.43
TDP1-204ENST00000545686 DNAJC9-AS1A6NH13 148 aa6.11□□□□□ -1.43
TDP1-204ENST00000545686 LECT2O14960 151 aa6.11□□□□□ -1.43
TDP1-204ENST00000545686 C2orf48Q96LS8 159 aa6.11□□□□□ -1.43
TDP1-204ENST00000545686 LINC00167Q96N53 147 aa6.11□□□□□ -1.43
TDP1-204ENST00000545686 MYO18BQ8IUG5 2567 aa6.11□□□□□ -1.43
TDP1-204ENST00000545686 NOTCH3Q9UM47 2321 aa6.11□□□□□ -1.43
TDP1-204ENST00000545686 LINC00959A0A1B0GUT2 108 aa6.11□□□□□ -1.43
TDP1-204ENST00000545686 PAX4O43316 350 aa6.11□□□□□ -1.43
TDP1-204ENST00000545686 RPL18AQ02543 176 aaKnown RBP6.11□□□□□ -1.43
TDP1-204ENST00000545686 ORMDL1Q9P0S3 153 aa6.11□□□□□ -1.43
TDP1-204ENST00000545686 IGKV3OR2-268A0A0C4DH90 116 aa6.1□□□□□ -1.43
TDP1-204ENST00000545686 A0A1W2PRX2 142 aa6.1□□□□□ -1.43
TDP1-204ENST00000545686 Q8IZM0 81 aa6.1□□□□□ -1.43
TDP1-204ENST00000545686 C19orf73Q9NVV2 129 aa6.1□□□□□ -1.43
TDP1-204ENST00000545686 IGLV1-51P01701 117 aa6.1□□□□□ -1.43
TDP1-204ENST00000545686 PFN2P35080 140 aa6.1□□□□□ -1.43
TDP1-204ENST00000545686 C9orf129Q5T035 196 aaKnown RBP6.1□□□□□ -1.43
TDP1-204ENST00000545686 POLQO75417 2590 aa6.1□□□□□ -1.43
TDP1-204ENST00000545686 ACACBO00763 2458 aa6.1□□□□□ -1.43
TDP1-204ENST00000545686 A0A1B0GUV1 79 aa6.09□□□□□ -1.43
TDP1-204ENST00000545686 C3orf56Q8N813 242 aa6.09□□□□□ -1.43
TDP1-204ENST00000545686 LINC00846Q9NV44 126 aa6.09□□□□□ -1.43
TDP1-204ENST00000545686 CACNA1AO00555 2505 aa6.09□□□□□ -1.43
TDP1-204ENST00000545686 SS18Q15532 418 aa6.09□□□□□ -1.43
TDP1-204ENST00000545686 C6orf226Q5I0X4 101 aa6.09□□□□□ -1.43
TDP1-204ENST00000545686 S100A7L2Q5SY68 101 aa6.09□□□□□ -1.43
TDP1-204ENST00000545686 OR13C6PQ8NH95 151 aa6.09□□□□□ -1.43
TDP1-204ENST00000545686 KIR2DL5BQ8NHK3 375 aa6.09□□□□□ -1.43
TDP1-204ENST00000545686 C2CD3Q4AC94 2353 aa6.09□□□□□ -1.44
TDP1-204ENST00000545686 SETXQ7Z333 2677 aaKnown RBP6.08□□□□□ -1.44
TDP1-204ENST00000545686 JMJD7-PLA2G4BH0Y9G9 81 aa6.08□□□□□ -1.44
TDP1-204ENST00000545686 NDUFC2O95298 119 aa6.08□□□□□ -1.44
TDP1-204ENST00000545686 RPL35AP18077 110 aaKnown RBP6.08□□□□□ -1.44
TDP1-204ENST00000545686 LINC00612Q8N6U2 182 aa6.08□□□□□ -1.44
TDP1-204ENST00000545686 TLN2Q9Y4G6 2542 aa6.08□□□□□ -1.44
TDP1-204ENST00000545686 CCKP06307 115 aa6.08□□□□□ -1.44
TDP1-204ENST00000545686 ATP5EP2Q5VTU8 51 aa6.08□□□□□ -1.44
TDP1-204ENST00000545686 KRTAP1-3Q8IUG1 177 aa6.08□□□□□ -1.44
TDP1-204ENST00000545686 NCR3O14931 201 aa6.07□□□□□ -1.44
TDP1-204ENST00000545686 KRTAP10-9P60411 292 aa6.07□□□□□ -1.44
TDP1-204ENST00000545686 COX17Q14061 63 aa6.07□□□□□ -1.44
TDP1-204ENST00000545686 WFDC10AQ9H1F0 79 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms