RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 IGHV1-58A0A0C4DH39 117 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 K7EQD1 137 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 LINC00694P0DN24 101 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 FHL2Q14192 279 aa4.91□□□□□ -1.62
HMGCS2-204ENST00000544913 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.9□□□□□ -1.62
HMGCS2-204ENST00000544913 A0A0J9YWU9 116 aa4.9□□□□□ -1.62
HMGCS2-204ENST00000544913 A0A0J9YXV3 536 aa4.9□□□□□ -1.62
HMGCS2-204ENST00000544913 TRBV6-4A0A1B0GX49 114 aa4.9□□□□□ -1.62
HMGCS2-204ENST00000544913 J3QR89 54 aa4.9□□□□□ -1.62
HMGCS2-204ENST00000544913 IGHV3-30P01768 117 aa4.9□□□□□ -1.62
HMGCS2-204ENST00000544913 IGHV3-30-5P0DP03 117 aa4.9□□□□□ -1.62
HMGCS2-204ENST00000544913 DEFB130BP0DP73 79 aa4.9□□□□□ -1.62
HMGCS2-204ENST00000544913 DEFB130AP0DP74 79 aa4.9□□□□□ -1.62
HMGCS2-204ENST00000544913 FAM19A3Q7Z5A8 133 aa4.9□□□□□ -1.62
HMGCS2-204ENST00000544913 CSMD3Q7Z407 3707 aa4.9□□□□□ -1.63
HMGCS2-204ENST00000544913 TRBV20-1A0A075B6N2 111 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 HERVK_113P63121 156 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 GAGE5Q13069 117 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 GAGE6Q13070 117 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 COPS9Q8WXC6 57 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 OPRPNQ99935 248 aaPredicted RBP4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 SS18L2Q9UHA2 77 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 TRGV2A0A075B6R0 118 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 IGLV5-45A0A087WSX0 123 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 LOC100131303A0A0U1RQF7 123 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 LCE2BO14633 110 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 TIMM17BO60830 172 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 SPART-AS1P0CW21 52 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 IGHV3-30-3P0DP02 117 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 UBE2D3P61077 147 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 UBE2D2P62837 147 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 VSIG2Q96IQ7 327 aa4.89□□□□□ -1.63
HMGCS2-204ENST00000544913 A0A0B4J2C4 111 aa4.88□□□□□ -1.63
HMGCS2-204ENST00000544913 A0A0J9YXY3 114 aa4.88□□□□□ -1.63
HMGCS2-204ENST00000544913 K7ERJ3 54 aa4.88□□□□□ -1.63
HMGCS2-204ENST00000544913 DEFB104AQ8WTQ1 72 aa4.88□□□□□ -1.63
HMGCS2-204ENST00000544913 FAM104AQ969W3 186 aa4.88□□□□□ -1.63
HMGCS2-204ENST00000544913 PRO1854Q9UHT4 67 aa4.88□□□□□ -1.63
HMGCS2-204ENST00000544913 J3QL48 77 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 IFITM1P13164 125 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 TSPEAR-AS2P59090 65 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 CIRBPQ14011 172 aaKnown RBP4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 Q6ZTC4 211 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 C10orf126Q8N4M7 172 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 TMEM101Q96IK0 257 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 SPANXDQ9BXN6 97 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 SPANXCQ9NY87 97 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 STARD9Q9P2P6 4700 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 PLECQ15149 4684 aaKnown RBP4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 IGKV2-29A2NJV5 120 aaPredicted RBP4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 UBE2L6O14933 153 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 NANOS2P60321 138 aaKnown RBP4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 DAD1P61803 113 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 GAGE13Q4V321 117 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 ZFAND6Q6FIF0 208 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 SMIM20Q8N5G0 67 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 NAA38Q9BRA0 125 aaKnown RBP4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 NDUFA12Q9UI09 145 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 TENM2Q9NT68 2774 aa4.87□□□□□ -1.63
HMGCS2-204ENST00000544913 TRGV4A0A0C4DH28 118 aa4.86□□□□□ -1.63
HMGCS2-204ENST00000544913 M0QXV9 152 aa4.86□□□□□ -1.63
HMGCS2-204ENST00000544913 ATP5G1P05496 136 aa4.86□□□□□ -1.63
HMGCS2-204ENST00000544913 CFC1BP0CG36 223 aa4.86□□□□□ -1.63
HMGCS2-204ENST00000544913 CFC1P0CG37 223 aa4.86□□□□□ -1.63
HMGCS2-204ENST00000544913 Q6ZUT4 128 aa4.86□□□□□ -1.63
HMGCS2-204ENST00000544913 TMEM243Q9BU79 118 aa4.86□□□□□ -1.63
HMGCS2-204ENST00000544913 PPDPFQ9H3Y8 114 aa4.86□□□□□ -1.63
HMGCS2-204ENST00000544913 IGHV3-38A0A0C4DH36 116 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 TEX48A0A1B0GUV7 120 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 APOMO95445 188 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 CEMP1Q6PRD7 247 aaPredicted RBP4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 ERG28Q9UKR5 140 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 NDUFA1O15239 70 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 NTM-AS1Q6ZSK4 140 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 MUSTN1Q8IVN3 82 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 ATP6V0E2Q8NHE4 81 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 C11orf45Q8TAV5 145 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 PRO0255Q9UI72 69 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 DNAH1Q9P2D7 4330 aa4.85□□□□□ -1.63
HMGCS2-204ENST00000544913 LOC107984156A0A0G2JMH3 177 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 IGLV5-39A0A0G2JS06 123 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 GAGE12JA6NER3 117 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 H3BMG7 143 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 GAGE4Q13068 117 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 MIAQ16674 131 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 LINC00242Q5T6M2 205 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 SFTA2Q6UW10 78 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 ARL17AQ8IVW1 177 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 CDKN2A-AS1Q9UH64 79 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 VPS13DQ5THJ4 4388 aa4.84□□□□□ -1.63
HMGCS2-204ENST00000544913 GAGE12HA6NDE8 117 aa4.84□□□□□ -1.64
HMGCS2-204ENST00000544913 COX6CP09669 75 aa4.84□□□□□ -1.64
HMGCS2-204ENST00000544913 NHLRC4P0CG21 123 aaPredicted RBP4.84□□□□□ -1.64
HMGCS2-204ENST00000544913 SCGB1C2P0DMR2 95 aa4.84□□□□□ -1.64
HMGCS2-204ENST00000544913 IGHV3-64A0A075B6Q5 118 aa4.83□□□□□ -1.64
HMGCS2-204ENST00000544913 A0A096LPF7 62 aa4.83□□□□□ -1.64
HMGCS2-204ENST00000544913 TRBV6-8A0A0A6YYG3 113 aa4.83□□□□□ -1.64
HMGCS2-204ENST00000544913 TRAV8-3A0A0A6YYJ7 113 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms