RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ESM1Q9NQ30 184 aa4.16□□□□□ -1.74
VPS50-220ENST00000544910 SNURFQ9Y675 71 aa4.16□□□□□ -1.74
VPS50-220ENST00000544910 COL6A6A6NMZ7 2263 aa4.16□□□□□ -1.74
VPS50-220ENST00000544910 WDR87Q6ZQQ6 2873 aa4.16□□□□□ -1.74
VPS50-220ENST00000544910 CCKP06307 115 aa4.16□□□□□ -1.74
VPS50-220ENST00000544910 C11orf72Q8NBR9 251 aa4.16□□□□□ -1.74
VPS50-220ENST00000544910 CDIP1Q9H305 208 aa4.16□□□□□ -1.74
VPS50-220ENST00000544910 XIRP2A4UGR9 3374 aa4.16□□□□□ -1.74
VPS50-220ENST00000544910 LINC00242Q5T6M2 205 aa4.16□□□□□ -1.74
VPS50-220ENST00000544910 REG3AQ06141 175 aa4.15□□□□□ -1.74
VPS50-220ENST00000544910 SHISA2Q6UWI4 295 aa4.15□□□□□ -1.74
VPS50-220ENST00000544910 LINC00269Q8N2A0 174 aa4.15□□□□□ -1.74
VPS50-220ENST00000544910 IGKV2D-24A0A075B6R9 120 aa4.15□□□□□ -1.74
VPS50-220ENST00000544910 A6NED7 52 aa4.15□□□□□ -1.74
VPS50-220ENST00000544910 ADAMTSL4-AS1Q5T5F5 129 aa4.15□□□□□ -1.74
VPS50-220ENST00000544910 SMIM1B2RUZ4 78 aa4.15□□□□□ -1.75
VPS50-220ENST00000544910 IGLV1-51P01701 117 aa4.15□□□□□ -1.75
VPS50-220ENST00000544910 LY6G6DO95868 133 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 SLPIP03973 132 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 MUC7Q8TAX7 377 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 CHCHD10Q8WYQ3 142 aaPredicted RBP4.14□□□□□ -1.75
VPS50-220ENST00000544910 PLA2G2AP14555 144 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 PPDPFQ9H3Y8 114 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 LAMA3Q16787 3333 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 WNK2Q9Y3S1 2297 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 FSHBP01225 129 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 LOC107984640A0A0U1RRK4 108 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 LINC00959A0A1B0GUT2 108 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 PMAIP1Q13794 54 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 BBC3Q96PG8 261 aaPredicted RBP4.14□□□□□ -1.75
VPS50-220ENST00000544910 ABCA4P78363 2273 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 LINC00482Q8N8I6 264 aa4.14□□□□□ -1.75
VPS50-220ENST00000544910 CRYGAP11844 174 aa4.13□□□□□ -1.75
VPS50-220ENST00000544910 ANKHD1Q8IWZ3 2542 aaKnown RBP4.13□□□□□ -1.75
VPS50-220ENST00000544910 DEFB121Q5J5C9 76 aa4.13□□□□□ -1.75
VPS50-220ENST00000544910 SPTA1P02549 2419 aa4.13□□□□□ -1.75
VPS50-220ENST00000544910 INAFM1C9JVW0 142 aa4.13□□□□□ -1.75
VPS50-220ENST00000544910 FHL2Q14192 279 aa4.13□□□□□ -1.75
VPS50-220ENST00000544910 RPL28P46779 137 aaKnown RBP4.13□□□□□ -1.75
VPS50-220ENST00000544910 SCXQ7RTU7 201 aa4.13□□□□□ -1.75
VPS50-220ENST00000544910 SMIM11BQ8TCY0 68 aa4.13□□□□□ -1.75
VPS50-220ENST00000544910 KLK12Q9UKR0 248 aa4.12□□□□□ -1.75
VPS50-220ENST00000544910 SZT2Q5T011 3432 aa4.12□□□□□ -1.75
VPS50-220ENST00000544910 H0Y9J4 135 aa4.12□□□□□ -1.75
VPS50-220ENST00000544910 ZNF575Q86XF7 245 aa4.12□□□□□ -1.75
VPS50-220ENST00000544910 RIF1Q5UIP0 2472 aaKnown RBP4.12□□□□□ -1.75
VPS50-220ENST00000544910 BCE1O60756 84 aa4.12□□□□□ -1.75
VPS50-220ENST00000544910 COX17Q14061 63 aa4.12□□□□□ -1.75
VPS50-220ENST00000544910 C6orf99Q4VX62 202 aa4.12□□□□□ -1.75
VPS50-220ENST00000544910 UNC80Q8N2C7 3258 aa4.12□□□□□ -1.75
VPS50-220ENST00000544910 TRBV10-3A0A0K0K1G6 114 aa4.12□□□□□ -1.75
VPS50-220ENST00000544910 KIR2DL5BQ8NHK3 375 aa4.12□□□□□ -1.75
VPS50-220ENST00000544910 NACAE9PAV3 2078 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 CUL9Q8IWT3 2517 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 K7ERS5 55 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 FHL3Q13643 280 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 CD164L2Q6UWJ8 174 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.11□□□□□ -1.75
VPS50-220ENST00000544910 Q8IZM0 81 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 PRO0461Q9UI25 63 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 PTPRQQ9UMZ3 2332 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 A0A096LNT2 108 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 PRYO14603 147 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 IGKV4-1P06312 121 aa4.11□□□□□ -1.75
VPS50-220ENST00000544910 KLK5Q9Y337 293 aaPredicted RBP4.11□□□□□ -1.75
VPS50-220ENST00000544910 RANBP2P49792 3224 aaKnown RBP4.11□□□□□ -1.75
VPS50-220ENST00000544910 IGLV4-60A0A075B6I1 120 aa4.1□□□□□ -1.75
VPS50-220ENST00000544910 IGLV5-45A0A087WSX0 123 aa4.1□□□□□ -1.75
VPS50-220ENST00000544910 IGLV5-39A0A0G2JS06 123 aa4.1□□□□□ -1.75
VPS50-220ENST00000544910 RETNQ9HD89 108 aa4.1□□□□□ -1.75
VPS50-220ENST00000544910 NTM-AS1Q6ZSK4 140 aa4.1□□□□□ -1.75
VPS50-220ENST00000544910 A0A087WZ39 114 aa4.1□□□□□ -1.75
VPS50-220ENST00000544910 LAMA2P24043 3122 aaKnown RBP4.1□□□□□ -1.75
VPS50-220ENST00000544910 SMCPP49901 116 aaPredicted RBP4.1□□□□□ -1.75
VPS50-220ENST00000544910 CCL18P55774 89 aa4.1□□□□□ -1.75
VPS50-220ENST00000544910 A8MTW9 85 aa4.09□□□□□ -1.75
VPS50-220ENST00000544910 LELP1Q5T871 98 aa4.09□□□□□ -1.75
VPS50-220ENST00000544910 Q6ZQY7 126 aa4.09□□□□□ -1.75
VPS50-220ENST00000544910 SMR3AQ99954 134 aa4.09□□□□□ -1.75
VPS50-220ENST00000544910 DHRS4-AS1Q9P1J3 65 aa4.09□□□□□ -1.75
VPS50-220ENST00000544910 ABCA1O95477 2261 aa4.09□□□□□ -1.75
VPS50-220ENST00000544910 A0A087WVE0 104 aa4.09□□□□□ -1.75
VPS50-220ENST00000544910 TRBV7-6A0A0J9YX20 115 aa4.09□□□□□ -1.75
VPS50-220ENST00000544910 B9D2Q9BPU9 175 aa4.09□□□□□ -1.76
VPS50-220ENST00000544910 SOSTDC1Q6X4U4 206 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 SPTBN2O15020 2390 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 GVINP1Q7Z2Y8 2422 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 AKAP6Q13023 2319 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 Q8N814 137 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 MUC6Q6W4X9 2439 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 M0R378 163 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 SBSPONQ8IVN8 264 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 LINC01561Q8N1V8 128 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 REV3LO60673 3130 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 A0A087WYN8 130 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 Q9UF83 564 aa4.08□□□□□ -1.76
VPS50-220ENST00000544910 ESRGQ1W209 222 aa4.07□□□□□ -1.76
VPS50-220ENST00000544910 WFDC10BQ8IUB3 73 aa4.07□□□□□ -1.76
VPS50-220ENST00000544910 Q8N9L7 120 aa4.07□□□□□ -1.76
VPS50-220ENST00000544910 LITAFQ99732 161 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms