RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 KLK12Q9UKR0 248 aa6.46□□□□□ -1.38
YBX3-215ENST00000544504 UBR4Q5T4S7 5183 aa6.45□□□□□ -1.38
YBX3-215ENST00000544504 TRAV8-3A0A0A6YYJ7 113 aa6.45□□□□□ -1.38
YBX3-215ENST00000544504 TINCRA0A1B0GVN0 87 aa6.45□□□□□ -1.38
YBX3-215ENST00000544504 SMIM6P0DI80 62 aa6.45□□□□□ -1.38
YBX3-215ENST00000544504 UBE2D1P51668 147 aa6.45□□□□□ -1.38
YBX3-215ENST00000544504 HERVK_113P63121 156 aa6.45□□□□□ -1.38
YBX3-215ENST00000544504 NFE4Q86UQ8 179 aa6.45□□□□□ -1.38
YBX3-215ENST00000544504 LINC00269Q8N2A0 174 aa6.45□□□□□ -1.38
YBX3-215ENST00000544504 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
YBX3-215ENST00000544504 RMI2Q96E14 147 aa6.45□□□□□ -1.38
YBX3-215ENST00000544504 MRPL35Q9NZE8 188 aaKnown RBP6.45□□□□□ -1.38
YBX3-215ENST00000544504 TRAV13-1A0A0B4J241 112 aa6.44□□□□□ -1.38
YBX3-215ENST00000544504 LINC00959A0A1B0GUT2 108 aa6.44□□□□□ -1.38
YBX3-215ENST00000544504 HSBP1L1C9JCN9 74 aa6.44□□□□□ -1.38
YBX3-215ENST00000544504 IGKCP01834 107 aa6.44□□□□□ -1.38
YBX3-215ENST00000544504 IGLC3P0DOY3 106 aa6.44□□□□□ -1.38
YBX3-215ENST00000544504 RNASE13Q5GAN3 156 aaKnown RBP6.44□□□□□ -1.38
YBX3-215ENST00000544504 LRP1BQ9NZR2 4599 aa6.44□□□□□ -1.38
YBX3-215ENST00000544504 IGKV3OR2-268A0A0C4DH90 116 aa6.43□□□□□ -1.38
YBX3-215ENST00000544504 IBA57-AS1B1ANH7 110 aa6.43□□□□□ -1.38
YBX3-215ENST00000544504 H3BRM9 83 aa6.43□□□□□ -1.38
YBX3-215ENST00000544504 HERVK_113P61574 105 aa6.43□□□□□ -1.38
YBX3-215ENST00000544504 UBE2WQ96B02 151 aa6.43□□□□□ -1.38
YBX3-215ENST00000544504 CHAC1Q9BUX1 264 aa6.43□□□□□ -1.38
YBX3-215ENST00000544504 COX11Q9Y6N1 276 aa6.43□□□□□ -1.38
YBX3-215ENST00000544504 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
YBX3-215ENST00000544504 IGLV4-69A0A075B6H9 119 aa6.42□□□□□ -1.38
YBX3-215ENST00000544504 A0A0J9YXV3 536 aa6.42□□□□□ -1.38
YBX3-215ENST00000544504 C11orf86A6NJI1 115 aa6.42□□□□□ -1.38
YBX3-215ENST00000544504 S100A12P80511 92 aa6.42□□□□□ -1.38
YBX3-215ENST00000544504 PYY3Q5JQD4 70 aa6.42□□□□□ -1.38
YBX3-215ENST00000544504 LINC00242Q5T6M2 205 aa6.42□□□□□ -1.38
YBX3-215ENST00000544504 ZC2HC1BQ5TFG8 222 aa6.42□□□□□ -1.38
YBX3-215ENST00000544504 CD164L2Q6UWJ8 174 aa6.42□□□□□ -1.38
YBX3-215ENST00000544504 LINC01561Q8N1V8 128 aa6.42□□□□□ -1.38
YBX3-215ENST00000544504 C1orf43Q9BWL3 253 aa6.42□□□□□ -1.38
YBX3-215ENST00000544504 IGLV5-45A0A087WSX0 123 aa6.41□□□□□ -1.38
YBX3-215ENST00000544504 TMEM170BQ5T4T1 132 aa6.41□□□□□ -1.38
YBX3-215ENST00000544504 CLPSL2Q6UWE3 100 aa6.41□□□□□ -1.38
YBX3-215ENST00000544504 ENHOQ6UWT2 76 aa6.41□□□□□ -1.38
YBX3-215ENST00000544504 Q8N3U1 123 aa6.41□□□□□ -1.38
YBX3-215ENST00000544504 LINC00469Q8N7U9 141 aa6.41□□□□□ -1.38
YBX3-215ENST00000544504 CHCHD10Q8WYQ3 142 aaPredicted RBP6.41□□□□□ -1.38
YBX3-215ENST00000544504 PMCHL2Q9BQD1 86 aa6.41□□□□□ -1.38
YBX3-215ENST00000544504 TM2D2Q9BX73 214 aa6.41□□□□□ -1.38
YBX3-215ENST00000544504 DNAH5Q8TE73 4624 aa6.4□□□□□ -1.38
YBX3-215ENST00000544504 NBDYA0A0U1RRE5 68 aa6.4□□□□□ -1.38
YBX3-215ENST00000544504 VAMP8Q9BV40 100 aa6.4□□□□□ -1.38
YBX3-215ENST00000544504 A0A087WZ39 114 aa6.39□□□□□ -1.39
YBX3-215ENST00000544504 IGHV3OR16-9A0A0B4J2B5 98 aa6.39□□□□□ -1.39
YBX3-215ENST00000544504 COX7A2LO14548 114 aa6.39□□□□□ -1.39
YBX3-215ENST00000544504 APOMO95445 188 aa6.39□□□□□ -1.39
YBX3-215ENST00000544504 ZNF22P17026 224 aaPredicted RBP6.39□□□□□ -1.39
YBX3-215ENST00000544504 XCL1P47992 114 aa6.39□□□□□ -1.39
YBX3-215ENST00000544504 IGLV10-54A0A075B6I4 117 aa6.38□□□□□ -1.39
YBX3-215ENST00000544504 IGKV2D-24A0A075B6R9 120 aa6.38□□□□□ -1.39
YBX3-215ENST00000544504 MALP21145 153 aa6.38□□□□□ -1.39
YBX3-215ENST00000544504 CFAP161Q6P656 301 aa6.38□□□□□ -1.39
YBX3-215ENST00000544504 ATOH7Q8N100 152 aa6.38□□□□□ -1.39
YBX3-215ENST00000544504 CDKN2A-AS1Q9UH64 79 aa6.38□□□□□ -1.39
YBX3-215ENST00000544504 TMEM223A0PJW6 202 aa6.37□□□□□ -1.39
YBX3-215ENST00000544504 GAGE12HA6NDE8 117 aa6.37□□□□□ -1.39
YBX3-215ENST00000544504 COX6A2Q02221 97 aa6.37□□□□□ -1.39
YBX3-215ENST00000544504 MAPKAPK5-AS1Q8N8E1 139 aa6.37□□□□□ -1.39
YBX3-215ENST00000544504 PLEKHB2Q96CS7 222 aa6.37□□□□□ -1.39
YBX3-215ENST00000544504 Q9HAA7 133 aa6.37□□□□□ -1.39
YBX3-215ENST00000544504 E9PLD3 99 aa6.36□□□□□ -1.39
YBX3-215ENST00000544504 RTL8CO15255 209 aa6.36□□□□□ -1.39
YBX3-215ENST00000544504 FOXI1Q12951 378 aa6.36□□□□□ -1.39
YBX3-215ENST00000544504 SFTA2Q6UW10 78 aa6.36□□□□□ -1.39
YBX3-215ENST00000544504 C12orf57Q99622 126 aa6.36□□□□□ -1.39
YBX3-215ENST00000544504 IGHV1-58A0A0C4DH39 117 aa6.35□□□□□ -1.39
YBX3-215ENST00000544504 IGLV5-39A0A0G2JS06 123 aa6.35□□□□□ -1.39
YBX3-215ENST00000544504 hDV102S1A0JD36 115 aa6.35□□□□□ -1.39
YBX3-215ENST00000544504 LEPROTO15243 131 aa6.35□□□□□ -1.39
YBX3-215ENST00000544504 PSCAO43653 123 aa6.35□□□□□ -1.39
YBX3-215ENST00000544504 CDK2AP2O75956 126 aa6.35□□□□□ -1.39
YBX3-215ENST00000544504 SPATA45Q537H7 98 aa6.35□□□□□ -1.39
YBX3-215ENST00000544504 C5orf38Q86SI9 138 aa6.35□□□□□ -1.39
YBX3-215ENST00000544504 STPG4Q8N801 248 aa6.35□□□□□ -1.39
YBX3-215ENST00000544504 PAM16Q9Y3D7 125 aa6.35□□□□□ -1.39
YBX3-215ENST00000544504 IGHV3-64A0A075B6Q5 118 aa6.34□□□□□ -1.39
YBX3-215ENST00000544504 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.39
YBX3-215ENST00000544504 F8WDY8 70 aa6.34□□□□□ -1.39
YBX3-215ENST00000544504 PRSS2P07478 247 aa6.34□□□□□ -1.39
YBX3-215ENST00000544504 SPINK8P0C7L1 97 aa6.34□□□□□ -1.39
YBX3-215ENST00000544504 LGALS3P17931 250 aaKnown RBP6.34□□□□□ -1.39
YBX3-215ENST00000544504 NMUP48645 174 aa6.34□□□□□ -1.39
YBX3-215ENST00000544504 KRTAP26-1Q6PEX3 210 aa6.34□□□□□ -1.39
YBX3-215ENST00000544504 Q6ZR54 194 aa6.34□□□□□ -1.39
YBX3-215ENST00000544504 LINC00518Q8N0U6 118 aa6.34□□□□□ -1.39
YBX3-215ENST00000544504 J3QQQ9 107 aa6.33□□□□□ -1.4
YBX3-215ENST00000544504 CXCL5P42830 114 aa6.33□□□□□ -1.4
YBX3-215ENST00000544504 C14orf177Q52M58 125 aa6.33□□□□□ -1.4
YBX3-215ENST00000544504 Q8IZM0 81 aa6.33□□□□□ -1.4
YBX3-215ENST00000544504 C6orf223Q8N319 242 aa6.33□□□□□ -1.4
YBX3-215ENST00000544504 COX7B2Q8TF08 81 aa6.33□□□□□ -1.4
YBX3-215ENST00000544504 ORAOV1Q8WV07 137 aa6.33□□□□□ -1.4
YBX3-215ENST00000544504 KRTAP1-5Q9BYS1 174 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms