RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 IGHV1-58A0A0C4DH39 117 aa9.8□□□□□ -0.84
CD9-210ENST00000543916 HBDP02042 147 aa9.8□□□□□ -0.84
CD9-210ENST00000543916 SLPIP03973 132 aa9.8□□□□□ -0.84
CD9-210ENST00000543916 S100A1P23297 94 aa9.8□□□□□ -0.84
CD9-210ENST00000543916 PAPPA-AS1Q5QFB9 102 aa9.8□□□□□ -0.84
CD9-210ENST00000543916 CHCHD1Q96BP2 118 aaKnown RBP9.8□□□□□ -0.84
CD9-210ENST00000543916 COX6A2Q02221 97 aa9.79□□□□□ -0.84
CD9-210ENST00000543916 PDZD11Q5EBL8 140 aa9.79□□□□□ -0.84
CD9-210ENST00000543916 BAGE3Q86Y29 109 aa9.79□□□□□ -0.84
CD9-210ENST00000543916 MALP21145 153 aa9.78□□□□□ -0.84
CD9-210ENST00000543916 LINC00310P59036 64 aa9.78□□□□□ -0.84
CD9-210ENST00000543916 CNBPP62633 177 aaKnown RBP9.78□□□□□ -0.84
CD9-210ENST00000543916 FAM19A3Q7Z5A8 133 aa9.78□□□□□ -0.84
CD9-210ENST00000543916 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.77□□□□□ -0.85
CD9-210ENST00000543916 LINC00526Q96FQ7 95 aa9.77□□□□□ -0.85
CD9-210ENST00000543916 SERF1AO75920 110 aa9.76□□□□□ -0.85
CD9-210ENST00000543916 CDK2AP2O75956 126 aa9.76□□□□□ -0.85
CD9-210ENST00000543916 C9orf163Q8N9P6 203 aa9.76□□□□□ -0.85
CD9-210ENST00000543916 APOBP04114 4563 aaKnown RBP9.75□□□□□ -0.85
CD9-210ENST00000543916 RYR1P21817 5038 aa9.75□□□□□ -0.85
CD9-210ENST00000543916 A0A0J9YXV3 536 aa9.75□□□□□ -0.85
CD9-210ENST00000543916 PMVKQ15126 192 aa9.75□□□□□ -0.85
CD9-210ENST00000543916 CST9LQ9H4G1 147 aa9.75□□□□□ -0.85
CD9-210ENST00000543916 FAM30AQ9NZY2 134 aa9.75□□□□□ -0.85
CD9-210ENST00000543916 IGHV3-64A0A075B6Q5 118 aa9.74□□□□□ -0.85
CD9-210ENST00000543916 A0A087WZ39 114 aa9.74□□□□□ -0.85
CD9-210ENST00000543916 HSBP1O75506 76 aa9.74□□□□□ -0.85
CD9-210ENST00000543916 APOMO95445 188 aa9.74□□□□□ -0.85
CD9-210ENST00000543916 FAM19A2Q8N3H0 131 aa9.74□□□□□ -0.85
CD9-210ENST00000543916 IGLV4-69A0A075B6H9 119 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.73□□□□□ -0.85
CD9-210ENST00000543916 ZNF561-AS1K7EIQ3 104 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 NUPR1O60356 82 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST1H2BKO60814 126 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 ATP5LO75964 103 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST1H2BJP06899 126 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST1H2BOP23527 126 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST1H2BBP33778 126 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 XGP55808 180 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST1H2BDP58876 126 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST1H2BCP62807 126 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HAMPP81172 84 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST2H2BEQ16778 126 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.73□□□□□ -0.85
CD9-210ENST00000543916 Q6ZSA8 131 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 OR10D4PQ8NGN7 298 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 ORAOV1Q8WV07 137 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST1H2BHQ93079 126 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST1H2BNQ99877 126 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HIST1H2BMQ99879 126 aa9.73□□□□□ -0.85
CD9-210ENST00000543916 HERVK_113P63121 156 aa9.72□□□□□ -0.85
CD9-210ENST00000543916 SEC11AP67812 179 aa9.72□□□□□ -0.85
CD9-210ENST00000543916 SPAG11BQ08648 103 aa9.72□□□□□ -0.85
CD9-210ENST00000543916 CDKN2A-AS1Q9UH64 79 aa9.72□□□□□ -0.85
CD9-210ENST00000543916 HERC2O95714 4834 aa9.72□□□□□ -0.85
CD9-210ENST00000543916 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.86
CD9-210ENST00000543916 NDUFA6P56556 154 aa9.71□□□□□ -0.86
CD9-210ENST00000543916 SDIM1Q6ZPB5 146 aa9.71□□□□□ -0.86
CD9-210ENST00000543916 GEMIN7Q9H840 131 aaKnown RBP9.71□□□□□ -0.86
CD9-210ENST00000543916 DNAH8Q96JB1 4490 aa9.71□□□□□ -0.86
CD9-210ENST00000543916 SYCNQ0VAF6 134 aa9.7□□□□□ -0.86
CD9-210ENST00000543916 LINC01561Q8N1V8 128 aa9.7□□□□□ -0.86
CD9-210ENST00000543916 CARD19Q96LW7 228 aa9.7□□□□□ -0.86
CD9-210ENST00000543916 IGLV5-45A0A087WSX0 123 aa9.69□□□□□ -0.86
CD9-210ENST00000543916 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
CD9-210ENST00000543916 Q6ZRU5 148 aa9.69□□□□□ -0.86
CD9-210ENST00000543916 LINC00469Q8N7U9 141 aa9.69□□□□□ -0.86
CD9-210ENST00000543916 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
CD9-210ENST00000543916 C2orf48Q96LS8 159 aa9.69□□□□□ -0.86
CD9-210ENST00000543916 KRTAP17-1Q9BYP8 105 aa9.69□□□□□ -0.86
CD9-210ENST00000543916 PANO1I0J062 215 aa9.68□□□□□ -0.86
CD9-210ENST00000543916 IGLC3P0DOY3 106 aa9.68□□□□□ -0.86
CD9-210ENST00000543916 CAMK2N2Q96S95 79 aa9.68□□□□□ -0.86
CD9-210ENST00000543916 HSPG2P98160 4391 aa9.67□□□□□ -0.86
CD9-210ENST00000543916 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
CD9-210ENST00000543916 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.67□□□□□ -0.86
CD9-210ENST00000543916 SMIM1B2RUZ4 78 aa9.66□□□□□ -0.86
CD9-210ENST00000543916 LEPROTL1O95214 131 aa9.66□□□□□ -0.86
CD9-210ENST00000543916 TRAV12-1A0A0B4J245 112 aa9.65□□□□□ -0.86
CD9-210ENST00000543916 CHTF8P0CG12 524 aa9.65□□□□□ -0.86
CD9-210ENST00000543916 C10orf25Q5T742 122 aa9.65□□□□□ -0.86
CD9-210ENST00000543916 SCXQ7RTU7 201 aa9.65□□□□□ -0.86
CD9-210ENST00000543916 PACRGQ96M98 296 aaPredicted RBP9.65□□□□□ -0.86
CD9-210ENST00000543916 CHTOPQ9Y3Y2 248 aaKnown RBP9.65□□□□□ -0.86
CD9-210ENST00000543916 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
CD9-210ENST00000543916 F8WDY8 70 aa9.64□□□□□ -0.87
CD9-210ENST00000543916 NDUFA1O15239 70 aa9.64□□□□□ -0.87
CD9-210ENST00000543916 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
CD9-210ENST00000543916 FABP4P15090 132 aa9.64□□□□□ -0.87
CD9-210ENST00000543916 ZNF22P17026 224 aaPredicted RBP9.64□□□□□ -0.87
CD9-210ENST00000543916 C2orf82Q6UX34 121 aa9.64□□□□□ -0.87
CD9-210ENST00000543916 UNQ6190/PRO20217Q6UXQ8 127 aa9.64□□□□□ -0.87
CD9-210ENST00000543916 TOMM7Q9P0U1 55 aa9.64□□□□□ -0.87
CD9-210ENST00000543916 A0A096LNI7 61 aa9.63□□□□□ -0.87
CD9-210ENST00000543916 CIRBPQ14011 172 aaKnown RBP9.63□□□□□ -0.87
CD9-210ENST00000543916 Q8IZM0 81 aa9.63□□□□□ -0.87
CD9-210ENST00000543916 CIRBP-AS1Q8TBR5 109 aa9.63□□□□□ -0.87
CD9-210ENST00000543916 MRPL35Q9NZE8 188 aaKnown RBP9.63□□□□□ -0.87
CD9-210ENST00000543916 H0Y8G0 127 aa9.62□□□□□ -0.87
CD9-210ENST00000543916 SMR3BP02814 79 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms