RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 UBE2D1P51668 147 aa11.56□□□□□ -0.56
TSFM-208ENST00000543727 HIGD2BQ4VC39 106 aa11.56□□□□□ -0.56
TSFM-208ENST00000543727 LINC00173Q6ZV60 143 aa11.56□□□□□ -0.56
TSFM-208ENST00000543727 OR10D4PQ8NGN7 298 aa11.56□□□□□ -0.56
TSFM-208ENST00000543727 LINC01620Q4KN68 170 aa11.55□□□□□ -0.56
TSFM-208ENST00000543727 LINC00242Q5T6M2 205 aa11.55□□□□□ -0.56
TSFM-208ENST00000543727 Q8N1X5 172 aa11.55□□□□□ -0.56
TSFM-208ENST00000543727 F8WDY8 70 aa11.54□□□□□ -0.56
TSFM-208ENST00000543727 SLPIP03973 132 aa11.54□□□□□ -0.56
TSFM-208ENST00000543727 LINC01561Q8N1V8 128 aa11.54□□□□□ -0.56
TSFM-208ENST00000543727 FAM30AQ9NZY2 134 aa11.54□□□□□ -0.56
TSFM-208ENST00000543727 A0A087WZ39 114 aa11.53□□□□□ -0.56
TSFM-208ENST00000543727 SDIM1Q6ZPB5 146 aa11.53□□□□□ -0.56
TSFM-208ENST00000543727 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
TSFM-208ENST00000543727 C2orf48Q96LS8 159 aa11.53□□□□□ -0.56
TSFM-208ENST00000543727 CHAC1Q9BUX1 264 aa11.53□□□□□ -0.56
TSFM-208ENST00000543727 HBDP02042 147 aa11.52□□□□□ -0.57
TSFM-208ENST00000543727 HERVK_113P63121 156 aa11.52□□□□□ -0.57
TSFM-208ENST00000543727 CHCHD1Q96BP2 118 aaKnown RBP11.52□□□□□ -0.57
TSFM-208ENST00000543727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.51□□□□□ -0.57
TSFM-208ENST00000543727 URB1-AS1Q96HZ7 61 aa11.51□□□□□ -0.57
TSFM-208ENST00000543727 CARD19Q96LW7 228 aa11.51□□□□□ -0.57
TSFM-208ENST00000543727 SYCNQ0VAF6 134 aa11.5□□□□□ -0.57
TSFM-208ENST00000543727 IGLV4-69A0A075B6H9 119 aa11.49□□□□□ -0.57
TSFM-208ENST00000543727 A0A096LNJ9 63 aa11.49□□□□□ -0.57
TSFM-208ENST00000543727 COLCA2A8K830 154 aa11.49□□□□□ -0.57
TSFM-208ENST00000543727 SPAG11BQ08648 103 aa11.49□□□□□ -0.57
TSFM-208ENST00000543727 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
TSFM-208ENST00000543727 PMVKQ15126 192 aa11.49□□□□□ -0.57
TSFM-208ENST00000543727 SCXQ7RTU7 201 aa11.49□□□□□ -0.57
TSFM-208ENST00000543727 ORAOV1Q8WV07 137 aa11.49□□□□□ -0.57
TSFM-208ENST00000543727 ATP5LO75964 103 aa11.48□□□□□ -0.57
TSFM-208ENST00000543727 TRGC2P03986 189 aa11.48□□□□□ -0.57
TSFM-208ENST00000543727 COX6A2Q02221 97 aa11.48□□□□□ -0.57
TSFM-208ENST00000543727 GEMIN7Q9H840 131 aaKnown RBP11.48□□□□□ -0.57
TSFM-208ENST00000543727 LINC00474Q9P2X8 69 aa11.48□□□□□ -0.57
TSFM-208ENST00000543727 HERC2O95714 4834 aa11.47□□□□□ -0.57
TSFM-208ENST00000543727 APOBP04114 4563 aaKnown RBP11.47□□□□□ -0.57
TSFM-208ENST00000543727 CAMK2N2Q96S95 79 aa11.47□□□□□ -0.57
TSFM-208ENST00000543727 CST9LQ9H4G1 147 aa11.47□□□□□ -0.57
TSFM-208ENST00000543727 HSPG2P98160 4391 aa11.47□□□□□ -0.57
TSFM-208ENST00000543727 RYR1P21817 5038 aa11.46□□□□□ -0.57
TSFM-208ENST00000543727 TINCRA0A1B0GVN0 87 aa11.46□□□□□ -0.57
TSFM-208ENST00000543727 RNF151Q2KHN1 245 aa11.46□□□□□ -0.57
TSFM-208ENST00000543727 PDZD11Q5EBL8 140 aa11.46□□□□□ -0.57
TSFM-208ENST00000543727 ZC2HC1BQ5TFG8 222 aa11.46□□□□□ -0.57
TSFM-208ENST00000543727 CIRBP-AS1Q8TBR5 109 aa11.46□□□□□ -0.57
TSFM-208ENST00000543727 EPM2AB3EWF7 344 aa11.45□□□□□ -0.58
TSFM-208ENST00000543727 FAM229AH3BQW9 127 aa11.45□□□□□ -0.58
TSFM-208ENST00000543727 BAGE3Q86Y29 109 aa11.45□□□□□ -0.58
TSFM-208ENST00000543727 LINC00526Q96FQ7 95 aa11.45□□□□□ -0.58
TSFM-208ENST00000543727 MRPL35Q9NZE8 188 aaKnown RBP11.45□□□□□ -0.58
TSFM-208ENST00000543727 IGLV5-45A0A087WSX0 123 aa11.44□□□□□ -0.58
TSFM-208ENST00000543727 NDUFA1O15239 70 aa11.44□□□□□ -0.58
TSFM-208ENST00000543727 SPACA4Q8TDM5 124 aa11.44□□□□□ -0.58
TSFM-208ENST00000543727 HAMPP81172 84 aa11.43□□□□□ -0.58
TSFM-208ENST00000543727 Q6ZRU5 148 aa11.43□□□□□ -0.58
TSFM-208ENST00000543727 PACRGQ96M98 296 aaPredicted RBP11.43□□□□□ -0.58
TSFM-208ENST00000543727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.43□□□□□ -0.58
TSFM-208ENST00000543727 A0A0J9YXV3 536 aa11.42□□□□□ -0.58
TSFM-208ENST00000543727 LOC107984640A0A0U1RRK4 108 aa11.42□□□□□ -0.58
TSFM-208ENST00000543727 HSBP1O75506 76 aa11.42□□□□□ -0.58
TSFM-208ENST00000543727 PMCHL1Q16048 86 aa11.42□□□□□ -0.58
TSFM-208ENST00000543727 CDKN2A-AS1Q9UH64 79 aa11.42□□□□□ -0.58
TSFM-208ENST00000543727 KIAA0087Q14695 138 aa11.41□□□□□ -0.58
TSFM-208ENST00000543727 Q5VSD8 79 aa11.41□□□□□ -0.58
TSFM-208ENST00000543727 Q8IZM0 81 aa11.41□□□□□ -0.58
TSFM-208ENST00000543727 LINC00469Q8N7U9 141 aa11.41□□□□□ -0.58
TSFM-208ENST00000543727 SMR3BP02814 79 aaPredicted RBP11.4□□□□□ -0.58
TSFM-208ENST00000543727 PRSS2P07478 247 aa11.4□□□□□ -0.58
TSFM-208ENST00000543727 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
TSFM-208ENST00000543727 TRBV30A0A0K0K1B3 111 aa11.39□□□□□ -0.59
TSFM-208ENST00000543727 H3BRM9 83 aa11.39□□□□□ -0.59
TSFM-208ENST00000543727 PANO1I0J062 215 aa11.39□□□□□ -0.59
TSFM-208ENST00000543727 PLA2G1BP04054 148 aaKnown RBP11.39□□□□□ -0.59
TSFM-208ENST00000543727 LINC00528Q8N1L1 170 aa11.39□□□□□ -0.59
TSFM-208ENST00000543727 KRTAP17-1Q9BYP8 105 aa11.39□□□□□ -0.59
TSFM-208ENST00000543727 PLAC8Q9NZF1 115 aa11.39□□□□□ -0.59
TSFM-208ENST00000543727 A0A096LNI7 61 aa11.38□□□□□ -0.59
TSFM-208ENST00000543727 SCO1O75880 301 aa11.38□□□□□ -0.59
TSFM-208ENST00000543727 TLX1NBP0CAT3 122 aa11.38□□□□□ -0.59
TSFM-208ENST00000543727 S100A1P23297 94 aa11.38□□□□□ -0.59
TSFM-208ENST00000543727 CXCL5P42830 114 aa11.38□□□□□ -0.59
TSFM-208ENST00000543727 TRAV12-1A0A0B4J245 112 aa11.37□□□□□ -0.59
TSFM-208ENST00000543727 IGKV2-24A0A0C4DH68 120 aa11.37□□□□□ -0.59
TSFM-208ENST00000543727 CHTF8P0CG12 524 aa11.37□□□□□ -0.59
TSFM-208ENST00000543727 PTTG1IPP53801 180 aa11.37□□□□□ -0.59
TSFM-208ENST00000543727 NDUFA6P56556 154 aa11.37□□□□□ -0.59
TSFM-208ENST00000543727 IFI27L1Q96BM0 104 aa11.37□□□□□ -0.59
TSFM-208ENST00000543727 DPH3Q96FX2 82 aa11.37□□□□□ -0.59
TSFM-208ENST00000543727 A0A087WYN8 130 aa11.36□□□□□ -0.59
TSFM-208ENST00000543727 SMIM1B2RUZ4 78 aa11.36□□□□□ -0.59
TSFM-208ENST00000543727 SERF1AO75920 110 aa11.36□□□□□ -0.59
TSFM-208ENST00000543727 CKS1BP61024 79 aa11.36□□□□□ -0.59
TSFM-208ENST00000543727 MAJINQ3KP22 176 aa11.36□□□□□ -0.59
TSFM-208ENST00000543727 C6orf226Q5I0X4 101 aa11.36□□□□□ -0.59
TSFM-208ENST00000543727 KRTAP4-5Q9BYR2 181 aa11.36□□□□□ -0.59
TSFM-208ENST00000543727 UNQ6190/PRO20217Q6UXQ8 127 aa11.35□□□□□ -0.59
TSFM-208ENST00000543727 TOMM7Q9P0U1 55 aa11.35□□□□□ -0.59
TSFM-208ENST00000543727 C6orf48Q9UBA6 75 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms