RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 COPS9Q8WXC6 57 aa11.85□□□□□ -0.51
KDM2B-216ENST00000543025 CITED2Q99967 270 aaPredicted RBP11.85□□□□□ -0.51
KDM2B-216ENST00000543025 TRAV13-1A0A0B4J241 112 aa11.84□□□□□ -0.51
KDM2B-216ENST00000543025 TRAV4A0A0B4J268 109 aa11.84□□□□□ -0.51
KDM2B-216ENST00000543025 NDUFA7O95182 113 aa11.84□□□□□ -0.51
KDM2B-216ENST00000543025 Q6ZTI0 123 aa11.84□□□□□ -0.51
KDM2B-216ENST00000543025 ZNF625Q96I27 306 aaPredicted RBP11.84□□□□□ -0.51
KDM2B-216ENST00000543025 MAST4O15021 2626 aa11.84□□□□□ -0.51
KDM2B-216ENST00000543025 TRAV26-1A0A087WT03 109 aa11.83□□□□□ -0.52
KDM2B-216ENST00000543025 HILS1P60008 231 aa11.83□□□□□ -0.52
KDM2B-216ENST00000543025 CDC42SE2Q9NRR3 84 aa11.82□□□□□ -0.52
KDM2B-216ENST00000543025 A0A0U1RRA0 63 aa11.82□□□□□ -0.52
KDM2B-216ENST00000543025 A0A1W2PRX2 142 aa11.82□□□□□ -0.52
KDM2B-216ENST00000543025 CCL24O00175 119 aa11.82□□□□□ -0.52
KDM2B-216ENST00000543025 GAGE2BQ13066 116 aa11.82□□□□□ -0.52
KDM2B-216ENST00000543025 GAGE2EQ4V326 116 aa11.82□□□□□ -0.52
KDM2B-216ENST00000543025 C11orf44Q8N8P7 122 aa11.82□□□□□ -0.52
KDM2B-216ENST00000543025 ANAPC13Q9BS18 74 aa11.82□□□□□ -0.52
KDM2B-216ENST00000543025 GAGE2DQ9UEU5 116 aa11.82□□□□□ -0.52
KDM2B-216ENST00000543025 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
KDM2B-216ENST00000543025 GAGE4Q13068 117 aa11.81□□□□□ -0.52
KDM2B-216ENST00000543025 GAGE5Q13069 117 aa11.81□□□□□ -0.52
KDM2B-216ENST00000543025 PRIMA1Q86XR5 153 aa11.81□□□□□ -0.52
KDM2B-216ENST00000543025 MEIG1Q5JSS6 88 aa11.81□□□□□ -0.52
KDM2B-216ENST00000543025 F5H768 121 aa11.8□□□□□ -0.52
KDM2B-216ENST00000543025 RNASE1P07998 156 aaKnown RBP11.8□□□□□ -0.52
KDM2B-216ENST00000543025 NOP10Q9NPE3 64 aaKnown RBP11.8□□□□□ -0.52
KDM2B-216ENST00000543025 UBE2L6O14933 153 aa11.79□□□□□ -0.52
KDM2B-216ENST00000543025 HERV-K104P63124 156 aa11.79□□□□□ -0.52
KDM2B-216ENST00000543025 SOSTDC1Q6X4U4 206 aa11.79□□□□□ -0.52
KDM2B-216ENST00000543025 COX7A2LO14548 114 aa11.79□□□□□ -0.52
KDM2B-216ENST00000543025 DEFB121Q5J5C9 76 aa11.79□□□□□ -0.52
KDM2B-216ENST00000543025 Q6Q795 121 aa11.78□□□□□ -0.52
KDM2B-216ENST00000543025 FAM240AA0A1B0GVK7 77 aa11.78□□□□□ -0.52
KDM2B-216ENST00000543025 C15orf53Q8NAA6 179 aa11.78□□□□□ -0.52
KDM2B-216ENST00000543025 TMEM243Q9BU79 118 aa11.78□□□□□ -0.52
KDM2B-216ENST00000543025 SHISA2Q6UWI4 295 aa11.77□□□□□ -0.53
KDM2B-216ENST00000543025 C16orf74Q96GX8 76 aa11.76□□□□□ -0.53
KDM2B-216ENST00000543025 TEP1Q99973 2627 aaKnown RBP11.76□□□□□ -0.53
KDM2B-216ENST00000543025 CMC4P56277 68 aaPredicted RBP11.76□□□□□ -0.53
KDM2B-216ENST00000543025 PPDPFQ9H3Y8 114 aa11.76□□□□□ -0.53
KDM2B-216ENST00000543025 NF1P21359 2839 aa11.75□□□□□ -0.53
KDM2B-216ENST00000543025 MRPL23Q16540 153 aaKnown RBP11.75□□□□□ -0.53
KDM2B-216ENST00000543025 TRGV2A0A075B6R0 118 aa11.75□□□□□ -0.53
KDM2B-216ENST00000543025 GIG44P09565 113 aaPredicted RBP11.75□□□□□ -0.53
KDM2B-216ENST00000543025 PLAC8L1A1L4L8 177 aa11.74□□□□□ -0.53
KDM2B-216ENST00000543025 NDUFV3P56181 108 aaKnown RBP11.74□□□□□ -0.53
KDM2B-216ENST00000543025 GAGE7O76087 117 aa11.74□□□□□ -0.53
KDM2B-216ENST00000543025 GAGE12FP0CL80 117 aa11.74□□□□□ -0.53
KDM2B-216ENST00000543025 GAGE12GP0CL81 117 aa11.74□□□□□ -0.53
KDM2B-216ENST00000543025 GAGE12IP0CL82 117 aa11.74□□□□□ -0.53
KDM2B-216ENST00000543025 TTC32Q5I0X7 151 aa11.74□□□□□ -0.53
KDM2B-216ENST00000543025 TRBV6-4A0A1B0GX49 114 aa11.73□□□□□ -0.53
KDM2B-216ENST00000543025 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
KDM2B-216ENST00000543025 LOC100131303A0A0U1RQF7 123 aa11.71□□□□□ -0.53
KDM2B-216ENST00000543025 NIPBLQ6KC79 2804 aaeCLIP11.71□□□□□ -0.53
KDM2B-216ENST00000543025 TRACP01848 142 aa11.7□□□□□ -0.54
KDM2B-216ENST00000543025 WFDC10AQ9H1F0 79 aa11.7□□□□□ -0.54
KDM2B-216ENST00000543025 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
KDM2B-216ENST00000543025 FAM110AQ9BQ89 295 aa11.7□□□□□ -0.54
KDM2B-216ENST00000543025 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
KDM2B-216ENST00000543025 PF4P02776 101 aa11.69□□□□□ -0.54
KDM2B-216ENST00000543025 RPL35AP18077 110 aaKnown RBP11.69□□□□□ -0.54
KDM2B-216ENST00000543025 OVOL2Q9BRP0 275 aa11.69□□□□□ -0.54
KDM2B-216ENST00000543025 WNK1Q9H4A3 2382 aa11.69□□□□□ -0.54
KDM2B-216ENST00000543025 C16orf95Q9H693 158 aa11.69□□□□□ -0.54
KDM2B-216ENST00000543025 TRAV13-2A0A0B4J235 113 aa11.68□□□□□ -0.54
KDM2B-216ENST00000543025 GAGE6Q13070 117 aa11.68□□□□□ -0.54
KDM2B-216ENST00000543025 ACYP1P07311 99 aa11.68□□□□□ -0.54
KDM2B-216ENST00000543025 LINC01006Q8NI28 216 aa11.68□□□□□ -0.54
KDM2B-216ENST00000543025 IGLV1-51P01701 117 aa11.67□□□□□ -0.54
KDM2B-216ENST00000543025 FAM222AQ5U5X8 452 aa11.67□□□□□ -0.54
KDM2B-216ENST00000543025 CSNK1G2-AS1Q8NCQ2 148 aa11.67□□□□□ -0.54
KDM2B-216ENST00000543025 C19orf73Q9NVV2 129 aa11.67□□□□□ -0.54
KDM2B-216ENST00000543025 MIR7-3HGQ8N6C7 128 aa11.67□□□□□ -0.54
KDM2B-216ENST00000543025 CRPP02741 224 aa11.66□□□□□ -0.54
KDM2B-216ENST00000543025 TOMM7Q9P0U1 55 aa11.66□□□□□ -0.54
KDM2B-216ENST00000543025 TRBV6-8A0A0A6YYG3 113 aa11.66□□□□□ -0.54
KDM2B-216ENST00000543025 IGKV3OR2-268A0A0C4DH90 116 aa11.66□□□□□ -0.54
KDM2B-216ENST00000543025 RPL28P46779 137 aaKnown RBP11.65□□□□□ -0.54
KDM2B-216ENST00000543025 C2CD3Q4AC94 2353 aa11.65□□□□□ -0.54
KDM2B-216ENST00000543025 IGLV4-60A0A075B6I1 120 aa11.65□□□□□ -0.54
KDM2B-216ENST00000543025 FAM218AQ96MZ4 157 aa11.65□□□□□ -0.54
KDM2B-216ENST00000543025 BAALC-AS2P0C853 105 aa11.64□□□□□ -0.55
KDM2B-216ENST00000543025 FHL2Q14192 279 aa11.64□□□□□ -0.55
KDM2B-216ENST00000543025 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
KDM2B-216ENST00000543025 CHCHD5Q9BSY4 110 aa11.64□□□□□ -0.55
KDM2B-216ENST00000543025 IGHV3OR16-9A0A0B4J2B5 98 aa11.63□□□□□ -0.55
KDM2B-216ENST00000543025 TRBV7-7A0A0K0K1E9 115 aa11.63□□□□□ -0.55
KDM2B-216ENST00000543025 LINC00337Q8N6G1 96 aa11.63□□□□□ -0.55
KDM2B-216ENST00000543025 JMJD1CQ15652 2540 aa11.62□□□□□ -0.55
KDM2B-216ENST00000543025 IGKV2-28A0A075B6P5 120 aa11.62□□□□□ -0.55
KDM2B-216ENST00000543025 IGKV2D-28P01615 120 aa11.62□□□□□ -0.55
KDM2B-216ENST00000543025 LINC00158P58513 81 aa11.62□□□□□ -0.55
KDM2B-216ENST00000543025 B5MCH6 92 aa11.61□□□□□ -0.55
KDM2B-216ENST00000543025 A0A087WZ39 114 aa11.61□□□□□ -0.55
KDM2B-216ENST00000543025 IBA57-AS1B1ANH7 110 aa11.6□□□□□ -0.55
KDM2B-216ENST00000543025 NOTCH3Q9UM47 2321 aa11.6□□□□□ -0.55
KDM2B-216ENST00000543025 C22orf24Q9Y442 160 aa11.6□□□□□ -0.55
KDM2B-216ENST00000543025 CCDC179H3BU77 68 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms