RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 FAM222AQ5U5X8 452 aa9.15□□□□□ -0.94
DDX11-223ENST00000542838 LOC100131303A0A0U1RQF7 123 aa9.15□□□□□ -0.95
DDX11-223ENST00000542838 LINC00337Q8N6G1 96 aa9.15□□□□□ -0.95
DDX11-223ENST00000542838 MALP21145 153 aa9.14□□□□□ -0.95
DDX11-223ENST00000542838 GAGE2AQ6NT46 116 aa9.14□□□□□ -0.95
DDX11-223ENST00000542838 SMIM20Q8N5G0 67 aa9.14□□□□□ -0.95
DDX11-223ENST00000542838 C3orf56Q8N813 242 aa9.14□□□□□ -0.95
DDX11-223ENST00000542838 SND1-IT1Q9HBX3 110 aa9.14□□□□□ -0.95
DDX11-223ENST00000542838 INAFM2P0DMQ5 153 aa9.14□□□□□ -0.95
DDX11-223ENST00000542838 NOTCH3Q9UM47 2321 aa9.14□□□□□ -0.95
DDX11-223ENST00000542838 C2CD3Q4AC94 2353 aa9.14□□□□□ -0.95
DDX11-223ENST00000542838 TRGV2A0A075B6R0 118 aa9.13□□□□□ -0.95
DDX11-223ENST00000542838 LINC00158P58513 81 aa9.13□□□□□ -0.95
DDX11-223ENST00000542838 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
DDX11-223ENST00000542838 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
DDX11-223ENST00000542838 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
DDX11-223ENST00000542838 DNAL4O96015 105 aa9.11□□□□□ -0.95
DDX11-223ENST00000542838 SMIM11BQ8TCY0 68 aa9.11□□□□□ -0.95
DDX11-223ENST00000542838 CHD6Q8TD26 2715 aa9.11□□□□□ -0.95
DDX11-223ENST00000542838 ACACBO00763 2458 aa9.11□□□□□ -0.95
DDX11-223ENST00000542838 A0A087WYN8 130 aa9.11□□□□□ -0.95
DDX11-223ENST00000542838 CCL24O00175 119 aa9.11□□□□□ -0.95
DDX11-223ENST00000542838 OVOL2Q9BRP0 275 aa9.11□□□□□ -0.95
DDX11-223ENST00000542838 MYO18BQ8IUG5 2567 aa9.11□□□□□ -0.95
DDX11-223ENST00000542838 TEX15Q9BXT5 2789 aa9.1□□□□□ -0.95
DDX11-223ENST00000542838 IGLV4-60A0A075B6I1 120 aa9.1□□□□□ -0.95
DDX11-223ENST00000542838 TRGV4A0A0C4DH28 118 aa9.1□□□□□ -0.95
DDX11-223ENST00000542838 C16orf74Q96GX8 76 aa9.1□□□□□ -0.95
DDX11-223ENST00000542838 FBN2P35556 2912 aa9.1□□□□□ -0.95
DDX11-223ENST00000542838 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
DDX11-223ENST00000542838 CCL18P55774 89 aa9.1□□□□□ -0.95
DDX11-223ENST00000542838 KRTAP10-9P60411 292 aa9.1□□□□□ -0.95
DDX11-223ENST00000542838 PLAC8L1A1L4L8 177 aa9.09□□□□□ -0.95
DDX11-223ENST00000542838 GIG44P09565 113 aaPredicted RBP9.09□□□□□ -0.95
DDX11-223ENST00000542838 FAM208BQ5VWN6 2430 aa9.09□□□□□ -0.95
DDX11-223ENST00000542838 FAM110AQ9BQ89 295 aa9.09□□□□□ -0.95
DDX11-223ENST00000542838 TMEM126AQ9H061 195 aa9.09□□□□□ -0.95
DDX11-223ENST00000542838 IGSF10Q6WRI0 2623 aa9.08□□□□□ -0.96
DDX11-223ENST00000542838 RPL35AP18077 110 aaKnown RBP9.08□□□□□ -0.96
DDX11-223ENST00000542838 PFN2P35080 140 aa9.08□□□□□ -0.96
DDX11-223ENST00000542838 CXCL5P42830 114 aa9.08□□□□□ -0.96
DDX11-223ENST00000542838 WFDC10AQ9H1F0 79 aa9.08□□□□□ -0.96
DDX11-223ENST00000542838 C5orf38Q86SI9 138 aa9.08□□□□□ -0.96
DDX11-223ENST00000542838 IGHV3OR16-9A0A0B4J2B5 98 aa9.08□□□□□ -0.96
DDX11-223ENST00000542838 ATP5G1P05496 136 aa9.08□□□□□ -0.96
DDX11-223ENST00000542838 C9orf153Q5TBE3 101 aa9.08□□□□□ -0.96
DDX11-223ENST00000542838 C3orf22Q8N5N4 141 aa9.08□□□□□ -0.96
DDX11-223ENST00000542838 H0YGX0 51 aa9.07□□□□□ -0.96
DDX11-223ENST00000542838 PLA2G2AP14555 144 aa9.07□□□□□ -0.96
DDX11-223ENST00000542838 C9orf129Q5T035 196 aaKnown RBP9.07□□□□□ -0.96
DDX11-223ENST00000542838 CENPEQ02224 2701 aa9.07□□□□□ -0.96
DDX11-223ENST00000542838 TRBV6-8A0A0A6YYG3 113 aa9.07□□□□□ -0.96
DDX11-223ENST00000542838 IBA57-AS1B1ANH7 110 aa9.07□□□□□ -0.96
DDX11-223ENST00000542838 DEFB113Q30KQ7 82 aa9.07□□□□□ -0.96
DDX11-223ENST00000542838 C14orf132Q9NPU4 83 aa9.07□□□□□ -0.96
DDX11-223ENST00000542838 PAX4O43316 350 aa9.06□□□□□ -0.96
DDX11-223ENST00000542838 OR13C6PQ8NH95 151 aa9.06□□□□□ -0.96
DDX11-223ENST00000542838 LECT2O14960 151 aa9.06□□□□□ -0.96
DDX11-223ENST00000542838 TMEM86BQ8N661 226 aa9.06□□□□□ -0.96
DDX11-223ENST00000542838 PTPN13Q12923 2485 aa9.05□□□□□ -0.96
DDX11-223ENST00000542838 A0A087WZ39 114 aa9.05□□□□□ -0.96
DDX11-223ENST00000542838 UQCRQO14949 82 aa9.05□□□□□ -0.96
DDX11-223ENST00000542838 AKAP9Q99996 3911 aa9.05□□□□□ -0.96
DDX11-223ENST00000542838 DNAJC9-AS1A6NH13 148 aa9.05□□□□□ -0.96
DDX11-223ENST00000542838 LRRC75A-AS1Q8N1F1 130 aa9.05□□□□□ -0.96
DDX11-223ENST00000542838 C11orf68Q9H3H3 251 aaKnown RBP9.05□□□□□ -0.96
DDX11-223ENST00000542838 CMC4P56277 68 aaPredicted RBP9.04□□□□□ -0.96
DDX11-223ENST00000542838 FHL2Q14192 279 aa9.04□□□□□ -0.96
DDX11-223ENST00000542838 TLN2Q9Y4G6 2542 aa9.04□□□□□ -0.96
DDX11-223ENST00000542838 NAV2Q8IVL1 2488 aa9.04□□□□□ -0.96
DDX11-223ENST00000542838 PRB1P04280 392 aa9.04□□□□□ -0.96
DDX11-223ENST00000542838 CACNA1AO00555 2505 aa9.04□□□□□ -0.96
DDX11-223ENST00000542838 PIEZO1Q92508 2521 aa9.04□□□□□ -0.96
DDX11-223ENST00000542838 EPG5Q9HCE0 2579 aa9.04□□□□□ -0.96
DDX11-223ENST00000542838 C6orf226Q5I0X4 101 aa9.03□□□□□ -0.96
DDX11-223ENST00000542838 CUBNO60494 3623 aa9.03□□□□□ -0.96
DDX11-223ENST00000542838 JMJD1CQ15652 2540 aa9.03□□□□□ -0.96
DDX11-223ENST00000542838 SLPIP03973 132 aa9.03□□□□□ -0.96
DDX11-223ENST00000542838 LINC00526Q96FQ7 95 aa9.03□□□□□ -0.96
DDX11-223ENST00000542838 LINC00959A0A1B0GUT2 108 aa9.02□□□□□ -0.97
DDX11-223ENST00000542838 KLK5Q9Y337 293 aaPredicted RBP9.02□□□□□ -0.97
DDX11-223ENST00000542838 ABCA12Q86UK0 2595 aa9.02□□□□□ -0.97
DDX11-223ENST00000542838 CSNK1G2-AS1Q8NCQ2 148 aa9.02□□□□□ -0.97
DDX11-223ENST00000542838 LRRK2Q5S007 2527 aa9.02□□□□□ -0.97
DDX11-223ENST00000542838 SONP18583 2426 aaKnown RBP9.01□□□□□ -0.97
DDX11-223ENST00000542838 NCR3O14931 201 aa9.01□□□□□ -0.97
DDX11-223ENST00000542838 OBSCN-AS1Q96MR7 158 aa9.01□□□□□ -0.97
DDX11-223ENST00000542838 IGKV3D-7A0A0C4DH55 119 aa9.01□□□□□ -0.97
DDX11-223ENST00000542838 COX7CP15954 63 aa9.01□□□□□ -0.97
DDX11-223ENST00000542838 ESM1Q9NQ30 184 aa9.01□□□□□ -0.97
DDX11-223ENST00000542838 LINC00846Q9NV44 126 aa9.01□□□□□ -0.97
DDX11-223ENST00000542838 C19orf73Q9NVV2 129 aa9.01□□□□□ -0.97
DDX11-223ENST00000542838 XCL1P47992 114 aa9□□□□□ -0.97
DDX11-223ENST00000542838 ATOX1O00244 68 aa9□□□□□ -0.97
DDX11-223ENST00000542838 HIST1H4AP62805 103 aaKnown RBP9□□□□□ -0.97
DDX11-223ENST00000542838 DEFB130BP0DP73 79 aa8.99□□□□□ -0.97
DDX11-223ENST00000542838 DEFB130AP0DP74 79 aa8.99□□□□□ -0.97
DDX11-223ENST00000542838 C2orf48Q96LS8 159 aa8.99□□□□□ -0.97
DDX11-223ENST00000542838 ORMDL1Q9P0S3 153 aa8.99□□□□□ -0.97
DDX11-223ENST00000542838 SETXQ7Z333 2677 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms