RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 SCGB1D4Q6XE38 83 aa4.57□□□□□ -1.68
VEGFB-203ENST00000541681 HIST1H4GQ99525 98 aa4.57□□□□□ -1.68
VEGFB-203ENST00000541681 TRAV26-1A0A087WT03 109 aa4.56□□□□□ -1.68
VEGFB-203ENST00000541681 A0A0J9YWU9 116 aa4.56□□□□□ -1.68
VEGFB-203ENST00000541681 A0A1B0GUV1 79 aa4.56□□□□□ -1.68
VEGFB-203ENST00000541681 C9orf118A6NHY6 69 aa4.56□□□□□ -1.68
VEGFB-203ENST00000541681 GYPEP15421 78 aa4.56□□□□□ -1.68
VEGFB-203ENST00000541681 PTTG1IPP53801 180 aa4.56□□□□□ -1.68
VEGFB-203ENST00000541681 FXYD2P54710 66 aa4.56□□□□□ -1.68
VEGFB-203ENST00000541681 TSPEAR-AS2P59090 65 aa4.56□□□□□ -1.68
VEGFB-203ENST00000541681 RNASE13Q5GAN3 156 aaKnown RBP4.56□□□□□ -1.68
VEGFB-203ENST00000541681 LINC00242Q5T6M2 205 aa4.56□□□□□ -1.68
VEGFB-203ENST00000541681 STARD9Q9P2P6 4700 aa4.56□□□□□ -1.68
VEGFB-203ENST00000541681 IGLV5-39A0A0G2JS06 123 aa4.55□□□□□ -1.68
VEGFB-203ENST00000541681 TMEM238LA0A1B0GVL6 79 aa4.55□□□□□ -1.68
VEGFB-203ENST00000541681 A0A1B0GWB2 263 aa4.55□□□□□ -1.68
VEGFB-203ENST00000541681 CCL25O15444 150 aa4.55□□□□□ -1.68
VEGFB-203ENST00000541681 SRSF9Q13242 221 aaKnown RBP eCLIP4.55□□□□□ -1.68
VEGFB-203ENST00000541681 UBE2V1Q13404 147 aa4.55□□□□□ -1.68
VEGFB-203ENST00000541681 MRPL23Q16540 153 aaKnown RBP4.55□□□□□ -1.68
VEGFB-203ENST00000541681 SH2D6Q7Z4S9 175 aa4.55□□□□□ -1.68
VEGFB-203ENST00000541681 LINC00469Q8N7U9 141 aa4.55□□□□□ -1.68
VEGFB-203ENST00000541681 VSIG2Q96IQ7 327 aa4.55□□□□□ -1.68
VEGFB-203ENST00000541681 CDKN2A-AS1Q9UH64 79 aa4.55□□□□□ -1.68
VEGFB-203ENST00000541681 ALMS1Q8TCU4 4167 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 EPPK1P58107 5090 aaKnown RBP4.54□□□□□ -1.68
VEGFB-203ENST00000541681 TRAV8-3A0A0A6YYJ7 113 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 NUPR2A6NF83 97 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 TMEM238C9JI98 176 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 DEFB4AO15263 64 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 COX6A2Q02221 97 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 GAGE6Q13070 117 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 C12orf74Q32Q52 190 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 Q6ZVH6 145 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 CHCHD5Q9BSY4 110 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 NHP2Q9NX24 153 aaKnown RBP4.54□□□□□ -1.68
VEGFB-203ENST00000541681 CELA1Q9UNI1 258 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 CSMD3Q7Z407 3707 aa4.54□□□□□ -1.68
VEGFB-203ENST00000541681 A0A0J9YXY3 114 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 F5H768 121 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 H3BNG1 76 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 TIMM17BO60830 172 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 IGHV3-30P01768 117 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 SPINK8P0C7L1 97 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 IGHV3-30-5P0DP03 117 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 VAMP3Q15836 100 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 C11orf68Q9H3H3 251 aaKnown RBP4.53□□□□□ -1.68
VEGFB-203ENST00000541681 NDUFA12Q9UI09 145 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 ICOSQ9Y6W8 199 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 LYSTQ99698 3801 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 SACSQ9NZJ4 4579 aa4.53□□□□□ -1.68
VEGFB-203ENST00000541681 IGLV4-60A0A075B6I1 120 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 IGHV3-64A0A075B6Q5 118 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 TRAV13-1A0A0B4J241 112 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 H3BUT2 72 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 K7EP13 123 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 NDUFA1O15239 70 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 LINC01561Q8N1V8 128 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 RAB37Q96AX2 223 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 SPANXDQ9BXN6 97 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 SPANXCQ9NY87 97 aa4.52□□□□□ -1.69
VEGFB-203ENST00000541681 KLK5Q9Y337 293 aaPredicted RBP4.52□□□□□ -1.69
VEGFB-203ENST00000541681 BIRC6Q9NR09 4857 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 HYDINQ4G0P3 5121 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 IGHV3OR16-9A0A0B4J2B5 98 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 LINC00959A0A1B0GUT2 108 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 A0A1W2PPM0 123 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 GAGE10A6NGK3 116 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 SMIM1B2RUZ4 78 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 IGLL5B9A064 214 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 TMEM262E9PQX1 116 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 RBX1P62877 108 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 HERV-K104P63124 156 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 RPL24P83731 157 aaKnown RBP4.51□□□□□ -1.69
VEGFB-203ENST00000541681 CIRBPQ14011 172 aaKnown RBP4.51□□□□□ -1.69
VEGFB-203ENST00000541681 SS18Q15532 418 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 LELP1Q5T871 98 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 GTF2H5Q6ZYL4 71 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 LITAFQ99732 161 aa4.51□□□□□ -1.69
VEGFB-203ENST00000541681 A0A087WZ39 114 aa4.5□□□□□ -1.69
VEGFB-203ENST00000541681 A0A096LPF7 62 aa4.5□□□□□ -1.69
VEGFB-203ENST00000541681 FABP2P12104 132 aa4.5□□□□□ -1.69
VEGFB-203ENST00000541681 IFITM1P13164 125 aa4.5□□□□□ -1.69
VEGFB-203ENST00000541681 NANOS2P60321 138 aaKnown RBP4.5□□□□□ -1.69
VEGFB-203ENST00000541681 MUSTN1Q8IVN3 82 aa4.5□□□□□ -1.69
VEGFB-203ENST00000541681 PPDPFQ9H3Y8 114 aa4.5□□□□□ -1.69
VEGFB-203ENST00000541681 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.49□□□□□ -1.69
VEGFB-203ENST00000541681 A0A0B4J2C4 111 aa4.49□□□□□ -1.69
VEGFB-203ENST00000541681 K7EP34 96 aa4.49□□□□□ -1.69
VEGFB-203ENST00000541681 CFC1BP0CG36 223 aa4.49□□□□□ -1.69
VEGFB-203ENST00000541681 CFC1P0CG37 223 aa4.49□□□□□ -1.69
VEGFB-203ENST00000541681 HTN3P15516 51 aa4.49□□□□□ -1.69
VEGFB-203ENST00000541681 MIAQ16674 131 aa4.49□□□□□ -1.69
VEGFB-203ENST00000541681 SFTA2Q6UW10 78 aa4.49□□□□□ -1.69
VEGFB-203ENST00000541681 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
VEGFB-203ENST00000541681 C11orf45Q8TAV5 145 aa4.49□□□□□ -1.69
VEGFB-203ENST00000541681 COPS9Q8WXC6 57 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms