RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 CNFNQ9BYD5 112 aa10.26□□□□□ -0.77
COLCA1-204ENST00000540738 FHL2Q14192 279 aa10.25□□□□□ -0.77
COLCA1-204ENST00000540738 TTTY13Q9BZ97 58 aa10.25□□□□□ -0.77
COLCA1-204ENST00000540738 M0R378 163 aa10.24□□□□□ -0.77
COLCA1-204ENST00000540738 FSHBP01225 129 aa10.24□□□□□ -0.77
COLCA1-204ENST00000540738 NRACQ8N912 160 aa10.24□□□□□ -0.77
COLCA1-204ENST00000540738 CENPFP49454 3210 aa10.24□□□□□ -0.77
COLCA1-204ENST00000540738 LINC01620Q4KN68 170 aa10.23□□□□□ -0.77
COLCA1-204ENST00000540738 PTH2Q96A98 100 aa10.23□□□□□ -0.77
COLCA1-204ENST00000540738 CDC42SE2Q9NRR3 84 aa10.23□□□□□ -0.77
COLCA1-204ENST00000540738 ACANP16112 2415 aa10.22□□□□□ -0.77
COLCA1-204ENST00000540738 COX17Q14061 63 aa10.22□□□□□ -0.77
COLCA1-204ENST00000540738 Q8IZM0 81 aa10.22□□□□□ -0.77
COLCA1-204ENST00000540738 SRCAPQ6ZRS2 3230 aa10.21□□□□□ -0.77
COLCA1-204ENST00000540738 DHRS4-AS1Q9P1J3 65 aa10.21□□□□□ -0.78
COLCA1-204ENST00000540738 H0Y9J4 135 aa10.2□□□□□ -0.78
COLCA1-204ENST00000540738 F8WDY8 70 aa10.2□□□□□ -0.78
COLCA1-204ENST00000540738 A0A096LNI7 61 aa10.2□□□□□ -0.78
COLCA1-204ENST00000540738 TRBV30A0A0K0K1B3 111 aa10.2□□□□□ -0.78
COLCA1-204ENST00000540738 FXYD2P54710 66 aa10.2□□□□□ -0.78
COLCA1-204ENST00000540738 EGFEM1PQ0D2K5 195 aa10.2□□□□□ -0.78
COLCA1-204ENST00000540738 IGKV2D-26A0A0A0MRZ7 120 aa10.2□□□□□ -0.78
COLCA1-204ENST00000540738 LINC00308Q8TCZ7 52 aa10.2□□□□□ -0.78
COLCA1-204ENST00000540738 K7EP13 123 aa10.2□□□□□ -0.78
COLCA1-204ENST00000540738 TRAV23DV6A0A075B6W5 121 aa10.19□□□□□ -0.78
COLCA1-204ENST00000540738 A0A0B4J2C4 111 aa10.19□□□□□ -0.78
COLCA1-204ENST00000540738 H3BT86 120 aa10.19□□□□□ -0.78
COLCA1-204ENST00000540738 TIMM17BO60830 172 aa10.19□□□□□ -0.78
COLCA1-204ENST00000540738 LINC00526Q96FQ7 95 aa10.19□□□□□ -0.78
COLCA1-204ENST00000540738 TET2Q6N021 2002 aaPredicted RBP10.19□□□□□ -0.78
COLCA1-204ENST00000540738 LYPD5Q6UWN5 251 aa10.18□□□□□ -0.78
COLCA1-204ENST00000540738 PLAC8L1A1L4L8 177 aa10.18□□□□□ -0.78
COLCA1-204ENST00000540738 RPL28P46779 137 aaKnown RBP10.18□□□□□ -0.78
COLCA1-204ENST00000540738 COX8CQ7Z4L0 72 aa10.18□□□□□ -0.78
COLCA1-204ENST00000540738 MP68P56378 58 aa10.17□□□□□ -0.78
COLCA1-204ENST00000540738 DSCAML1Q8TD84 2053 aa10.17□□□□□ -0.78
COLCA1-204ENST00000540738 CYSRT1A8MQ03 144 aa10.17□□□□□ -0.78
COLCA1-204ENST00000540738 USP17L23D6RBM5 183 aa10.17□□□□□ -0.78
COLCA1-204ENST00000540738 IGKV2-28A0A075B6P5 120 aa10.17□□□□□ -0.78
COLCA1-204ENST00000540738 IGKV2D-28P01615 120 aa10.17□□□□□ -0.78
COLCA1-204ENST00000540738 A0A1B0GX51 115 aa10.17□□□□□ -0.78
COLCA1-204ENST00000540738 SS18L2Q9UHA2 77 aa10.17□□□□□ -0.78
COLCA1-204ENST00000540738 TRBV10-2A0A0K0K1G8 114 aa10.15□□□□□ -0.78
COLCA1-204ENST00000540738 CLEC2BQ92478 149 aa10.15□□□□□ -0.78
COLCA1-204ENST00000540738 WWC2-AS2Q96NR7 200 aa10.15□□□□□ -0.78
COLCA1-204ENST00000540738 SPATA3Q8NHX4 192 aa10.15□□□□□ -0.79
COLCA1-204ENST00000540738 POM121L12Q8N7R1 296 aa10.14□□□□□ -0.79
COLCA1-204ENST00000540738 MDFIQ99750 246 aa10.14□□□□□ -0.79
COLCA1-204ENST00000540738 A0A1B0GUV1 79 aa10.14□□□□□ -0.79
COLCA1-204ENST00000540738 C6orf99Q4VX62 202 aa10.14□□□□□ -0.79
COLCA1-204ENST00000540738 WFDC9Q8NEX5 89 aa10.14□□□□□ -0.79
COLCA1-204ENST00000540738 CSDC2Q9Y534 153 aaKnown RBP10.14□□□□□ -0.79
COLCA1-204ENST00000540738 M0QXV9 152 aa10.13□□□□□ -0.79
COLCA1-204ENST00000540738 HECTD1Q9ULT8 2610 aa10.13□□□□□ -0.79
COLCA1-204ENST00000540738 WFDC10BQ8IUB3 73 aa10.12□□□□□ -0.79
COLCA1-204ENST00000540738 SBSPONQ8IVN8 264 aa10.12□□□□□ -0.79
COLCA1-204ENST00000540738 C2orf48Q96LS8 159 aa10.11□□□□□ -0.79
COLCA1-204ENST00000540738 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
COLCA1-204ENST00000540738 H3BNG1 76 aa10.1□□□□□ -0.79
COLCA1-204ENST00000540738 TEN1Q86WV5 123 aa10.1□□□□□ -0.79
COLCA1-204ENST00000540738 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
COLCA1-204ENST00000540738 PPDPFQ9H3Y8 114 aa10.09□□□□□ -0.79
COLCA1-204ENST00000540738 RPL37AP8A6NKH3 93 aa10.09□□□□□ -0.79
COLCA1-204ENST00000540738 UNQ6190/PRO20217Q6UXQ8 127 aa10.09□□□□□ -0.79
COLCA1-204ENST00000540738 TCL1BO95988 128 aa10.09□□□□□ -0.79
COLCA1-204ENST00000540738 BPY2O14599 106 aa10.08□□□□□ -0.8
COLCA1-204ENST00000540738 CELA1Q9UNI1 258 aa10.08□□□□□ -0.8
COLCA1-204ENST00000540738 IGLV4-60A0A075B6I1 120 aa10.08□□□□□ -0.8
COLCA1-204ENST00000540738 CHKB-CPT1BH3BT56 60 aa10.08□□□□□ -0.8
COLCA1-204ENST00000540738 IGIPA6NJ69 53 aa10.08□□□□□ -0.8
COLCA1-204ENST00000540738 ZNF73O43830 326 aaPredicted RBP10.08□□□□□ -0.8
COLCA1-204ENST00000540738 UPK3BQ9BT76 320 aa10.07□□□□□ -0.8
COLCA1-204ENST00000540738 A8MZ25 164 aa10.06□□□□□ -0.8
COLCA1-204ENST00000540738 LINC01556Q5JQF7 62 aa10.06□□□□□ -0.8
COLCA1-204ENST00000540738 LINC01561Q8N1V8 128 aa10.05□□□□□ -0.8
COLCA1-204ENST00000540738 PCSK5Q92824 1860 aa10.05□□□□□ -0.8
COLCA1-204ENST00000540738 FOXI1Q12951 378 aa10.05□□□□□ -0.8
COLCA1-204ENST00000540738 C11orf72Q8NBR9 251 aa10.05□□□□□ -0.8
COLCA1-204ENST00000540738 GAS8-AS1O95177 125 aa10.04□□□□□ -0.8
COLCA1-204ENST00000540738 NDUFC2-KCTD14E9PQ53 114 aa10.04□□□□□ -0.8
COLCA1-204ENST00000540738 A0A096LNT2 108 aa10.04□□□□□ -0.8
COLCA1-204ENST00000540738 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
COLCA1-204ENST00000540738 TP73-AS1Q9UF72 201 aa10.03□□□□□ -0.8
COLCA1-204ENST00000540738 COX6A2Q02221 97 aa10.03□□□□□ -0.8
COLCA1-204ENST00000540738 REG3GQ6UW15 175 aa10.03□□□□□ -0.8
COLCA1-204ENST00000540738 C14orf132Q9NPU4 83 aa10.03□□□□□ -0.8
COLCA1-204ENST00000540738 SMIM1B2RUZ4 78 aa10.03□□□□□ -0.8
COLCA1-204ENST00000540738 IGLV9-49A0A0B4J1Y8 123 aa10.02□□□□□ -0.81
COLCA1-204ENST00000540738 Q6ZQY7 126 aa10.02□□□□□ -0.81
COLCA1-204ENST00000540738 IGKV3D-7A0A0C4DH55 119 aa10.02□□□□□ -0.81
COLCA1-204ENST00000540738 CDPF1Q6NVV7 123 aa10.02□□□□□ -0.81
COLCA1-204ENST00000540738 SMIM20Q8N5G0 67 aa10.02□□□□□ -0.81
COLCA1-204ENST00000540738 X6R8D5 127 aa10.02□□□□□ -0.81
COLCA1-204ENST00000540738 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.02□□□□□ -0.81
COLCA1-204ENST00000540738 C1orf137Q5JT78 98 aa10.01□□□□□ -0.81
COLCA1-204ENST00000540738 Q6ZSN1 163 aa10.01□□□□□ -0.81
COLCA1-204ENST00000540738 SPINK6Q6UWN8 80 aa10.01□□□□□ -0.81
COLCA1-204ENST00000540738 GOLGB1Q14789 3259 aaKnown RBP10.01□□□□□ -0.81
COLCA1-204ENST00000540738 IGKV4-1P06312 121 aa10.01□□□□□ -0.81
COLCA1-204ENST00000540738 MAPKAPK5-AS1Q8N8E1 139 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms