RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PPDPFQ9H3Y8 114 aa5.03□□□□□ -1.61
SORT1-209ENST00000538502 TANC2Q9HCD6 1990 aa5.02□□□□□ -1.61
SORT1-209ENST00000538502 MALRD1Q5VYJ5 2156 aa5.02□□□□□ -1.61
SORT1-209ENST00000538502 VPREB1P12018 145 aa5.02□□□□□ -1.61
SORT1-209ENST00000538502 NCOR1O75376 2440 aa5.02□□□□□ -1.61
SORT1-209ENST00000538502 TRAV10A0A0B4J240 114 aa5.02□□□□□ -1.61
SORT1-209ENST00000538502 PLAC8L1A1L4L8 177 aa5.02□□□□□ -1.61
SORT1-209ENST00000538502 SPTAN1Q13813 2472 aaKnown RBP5.02□□□□□ -1.61
SORT1-209ENST00000538502 Q6ZVQ6 151 aa5.02□□□□□ -1.61
SORT1-209ENST00000538502 ZNF580Q9UK33 172 aa5.02□□□□□ -1.61
SORT1-209ENST00000538502 LINC01547P58512 204 aaPredicted RBP5.02□□□□□ -1.61
SORT1-209ENST00000538502 C2orf16Q68DN1 1984 aa5.02□□□□□ -1.61
SORT1-209ENST00000538502 PRR4Q16378 134 aa5.02□□□□□ -1.61
SORT1-209ENST00000538502 IGKV2-28A0A075B6P5 120 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 A0A0J9YWU9 116 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 H0Y9P7 68 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 IGKV2D-28P01615 120 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 MED13Q9UHV7 2174 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 NOTCH3Q9UM47 2321 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 H3BPC8 53 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 SBSPONQ8IVN8 264 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 BBC3Q96PG8 261 aaPredicted RBP5.01□□□□□ -1.61
SORT1-209ENST00000538502 HCG22E2RYF7 251 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 IGHV4-31P0DP07 118 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 LINC00575Q6W349 94 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 ADAMTSL4-AS1Q5T5F5 129 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 EML5Q05BV3 1969 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 ZNF843Q8N446 348 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 NOTCH4Q99466 2003 aa5.01□□□□□ -1.61
SORT1-209ENST00000538502 CYSRT1A8MQ03 144 aa5□□□□□ -1.61
SORT1-209ENST00000538502 LINC00846Q9NV44 126 aa5□□□□□ -1.61
SORT1-209ENST00000538502 MUC22E2RYF6 1773 aaPredicted RBP5□□□□□ -1.61
SORT1-209ENST00000538502 REG3GQ6UW15 175 aa5□□□□□ -1.61
SORT1-209ENST00000538502 KIAA1549Q9HCM3 1950 aa5□□□□□ -1.61
SORT1-209ENST00000538502 ZNF702PQ9H963 129 aa5□□□□□ -1.61
SORT1-209ENST00000538502 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5□□□□□ -1.61
SORT1-209ENST00000538502 PCNX2A6NKB5 2137 aa5□□□□□ -1.61
SORT1-209ENST00000538502 PSPHP1O15172 72 aa5□□□□□ -1.61
SORT1-209ENST00000538502 COX6A2Q02221 97 aa5□□□□□ -1.61
SORT1-209ENST00000538502 BEAN1Q3B7T3 259 aa4.99□□□□□ -1.61
SORT1-209ENST00000538502 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.99□□□□□ -1.612e-8■■■□□ 15.5
SORT1-209ENST00000538502 Q8NA96 180 aa4.99□□□□□ -1.61
SORT1-209ENST00000538502 C2orf48Q96LS8 159 aa4.99□□□□□ -1.61
SORT1-209ENST00000538502 PCNX1Q96RV3 2341 aa4.99□□□□□ -1.61
SORT1-209ENST00000538502 A0A1B0GUV1 79 aa4.99□□□□□ -1.61
SORT1-209ENST00000538502 GVINP1Q7Z2Y8 2422 aa4.98□□□□□ -1.61
SORT1-209ENST00000538502 A0A1W2PNU3 283 aaPredicted RBP4.98□□□□□ -1.61
SORT1-209ENST00000538502 PRO0461Q9UI25 63 aa4.98□□□□□ -1.61
SORT1-209ENST00000538502 SHISA2Q6UWI4 295 aa4.98□□□□□ -1.61
SORT1-209ENST00000538502 A0A096LNI7 61 aa4.98□□□□□ -1.61
SORT1-209ENST00000538502 TP53AIP1Q9HCN2 124 aa4.98□□□□□ -1.61
SORT1-209ENST00000538502 COL5A1P20908 1838 aaPredicted RBP4.97□□□□□ -1.61
SORT1-209ENST00000538502 DSCAML1Q8TD84 2053 aa4.97□□□□□ -1.61
SORT1-209ENST00000538502 LRCOL1A6NCL2 159 aa4.97□□□□□ -1.61
SORT1-209ENST00000538502 KPRPQ5T749 579 aaPredicted RBP4.97□□□□□ -1.61
SORT1-209ENST00000538502 LOC100131303A0A0U1RQF7 123 aa4.97□□□□□ -1.61
SORT1-209ENST00000538502 Q6ZSV7 163 aa4.97□□□□□ -1.61
SORT1-209ENST00000538502 HCFC1P51610 2035 aa4.96□□□□□ -1.61
SORT1-209ENST00000538502 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.62
SORT1-209ENST00000538502 LOC110117498A0A087WWA1 95 aa4.96□□□□□ -1.62
SORT1-209ENST00000538502 RPL37AP8A6NKH3 93 aa4.96□□□□□ -1.62
SORT1-209ENST00000538502 ERC2-IT1O76042 136 aa4.96□□□□□ -1.62
SORT1-209ENST00000538502 SMCPP49901 116 aaPredicted RBP4.95□□□□□ -1.62
SORT1-209ENST00000538502 UNQ6190/PRO20217Q6UXQ8 127 aa4.95□□□□□ -1.62
SORT1-209ENST00000538502 NCOA6Q14686 2063 aaPredicted RBP4.95□□□□□ -1.62
SORT1-209ENST00000538502 TNCP24821 2201 aa4.95□□□□□ -1.62
SORT1-209ENST00000538502 CACNA1GO43497 2377 aa4.95□□□□□ -1.62
SORT1-209ENST00000538502 PLCE1Q9P212 2302 aa4.94□□□□□ -1.62
SORT1-209ENST00000538502 C4orf26Q17RF5 130 aa4.94□□□□□ -1.62
SORT1-209ENST00000538502 IGLV9-49A0A0B4J1Y8 123 aa4.94□□□□□ -1.62
SORT1-209ENST00000538502 SPINK6Q6UWN8 80 aa4.94□□□□□ -1.62
SORT1-209ENST00000538502 CPAMD8Q8IZJ3 1885 aa4.94□□□□□ -1.62
SORT1-209ENST00000538502 C1orf64Q8NEQ6 169 aa4.94□□□□□ -1.62
SORT1-209ENST00000538502 Q9BRP9 147 aa4.94□□□□□ -1.62
SORT1-209ENST00000538502 FHL2Q14192 279 aa4.93□□□□□ -1.62
SORT1-209ENST00000538502 SERTAD4-AS1Q5TG53 156 aa4.93□□□□□ -1.62
SORT1-209ENST00000538502 PCNX3Q9H6A9 2034 aa4.93□□□□□ -1.62
SORT1-209ENST00000538502 LINC00482Q8N8I6 264 aa4.93□□□□□ -1.62
SORT1-209ENST00000538502 IGLV5-45A0A087WSX0 123 aa4.93□□□□□ -1.62
SORT1-209ENST00000538502 SPAG11AQ6PDA7 123 aa4.93□□□□□ -1.62
SORT1-209ENST00000538502 ACYP2P14621 99 aa4.93□□□□□ -1.62
SORT1-209ENST00000538502 LINC00337Q8N6G1 96 aa4.93□□□□□ -1.62
SORT1-209ENST00000538502 NANOS2P60321 138 aaKnown RBP4.92□□□□□ -1.62
SORT1-209ENST00000538502 CYP4F30PQ9H0H9 118 aa4.92□□□□□ -1.62
SORT1-209ENST00000538502 KIF25-AS1Q9Y6Z4 181 aa4.92□□□□□ -1.62
SORT1-209ENST00000538502 IGLV4-60A0A075B6I1 120 aa4.92□□□□□ -1.62
SORT1-209ENST00000538502 IGHV6-1A0A0B4J1U7 121 aa4.92□□□□□ -1.62
SORT1-209ENST00000538502 IGHV4-30-4P0DP06 118 aa4.92□□□□□ -1.62
SORT1-209ENST00000538502 C11orf72Q8NBR9 251 aa4.92□□□□□ -1.62
SORT1-209ENST00000538502 SPATA3Q8NHX4 192 aa4.92□□□□□ -1.62
SORT1-209ENST00000538502 CACNA1HO95180 2353 aa4.91□□□□□ -1.62
SORT1-209ENST00000538502 LRP4O75096 1905 aa4.91□□□□□ -1.62
SORT1-209ENST00000538502 PCDH15Q96QU1 1955 aa4.91□□□□□ -1.62
SORT1-209ENST00000538502 MED12LQ86YW9 2145 aa4.91□□□□□ -1.62
SORT1-209ENST00000538502 A0A1B0GU69 56 aa4.91□□□□□ -1.62
SORT1-209ENST00000538502 Q6ZTC4 211 aa4.91□□□□□ -1.62
SORT1-209ENST00000538502 SMIM29Q86T20 159 aa4.91□□□□□ -1.62
SORT1-209ENST00000538502 PCOTHQ58A44 107 aa4.91□□□□□ -1.62
SORT1-209ENST00000538502 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.91□□□□□ -1.62
SORT1-209ENST00000538502 C8orf87E5RJ46 101 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms