RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TSHBP01222 138 aa4.97□□□□□ -1.61
MSH6-209ENST00000538136 C3orf79P0CE67 100 aa4.97□□□□□ -1.61
MSH6-209ENST00000538136 PSMB2P49721 201 aa4.97□□□□□ -1.61
MSH6-209ENST00000538136 CIRBPQ14011 172 aaKnown RBP4.97□□□□□ -1.61
MSH6-209ENST00000538136 CSMD3Q7Z407 3707 aa4.96□□□□□ -1.61
MSH6-209ENST00000538136 NDUFS6O75380 124 aaKnown RBP4.96□□□□□ -1.62
MSH6-209ENST00000538136 TMEM97Q5BJF2 176 aa4.96□□□□□ -1.62
MSH6-209ENST00000538136 NKAPP1Q8N9T2 125 aa4.96□□□□□ -1.62
MSH6-209ENST00000538136 IGKCP01834 107 aa4.96□□□□□ -1.62
MSH6-209ENST00000538136 NAA38Q9BRA0 125 aaKnown RBP4.96□□□□□ -1.62
MSH6-209ENST00000538136 CST9LQ9H4G1 147 aa4.96□□□□□ -1.62
MSH6-209ENST00000538136 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.62
MSH6-209ENST00000538136 IGLV4-69A0A075B6H9 119 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 IGKV2-28A0A075B6P5 120 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 IGKV2D-28P01615 120 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 KLK9Q2XQG4 91 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 ZNF575Q86XF7 245 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 RPL37AP8A6NKH3 93 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 TIRAPP58753 221 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 TIMM17AQ99595 171 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 TP73-AS1Q9UF72 201 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 NDUFA12Q9UI09 145 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 APLNQ9ULZ1 77 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 LINC00959A0A1B0GUT2 108 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 NRACQ8N912 160 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 FAM19A4Q96LR4 140 aa4.95□□□□□ -1.62
MSH6-209ENST00000538136 C11orf86A6NJI1 115 aa4.94□□□□□ -1.62
MSH6-209ENST00000538136 MED14OSP0DP75 135 aa4.94□□□□□ -1.62
MSH6-209ENST00000538136 SYCNQ0VAF6 134 aa4.94□□□□□ -1.62
MSH6-209ENST00000538136 SPATA45Q537H7 98 aa4.94□□□□□ -1.62
MSH6-209ENST00000538136 DEFB105AQ8NG35 78 aa4.94□□□□□ -1.62
MSH6-209ENST00000538136 HIGD2AQ9BW72 106 aa4.94□□□□□ -1.62
MSH6-209ENST00000538136 IGLV4-3A0A075B6K6 122 aa4.93□□□□□ -1.62
MSH6-209ENST00000538136 LOC107984156A0A0G2JMH3 177 aa4.93□□□□□ -1.62
MSH6-209ENST00000538136 DNLZQ5SXM8 178 aa4.93□□□□□ -1.62
MSH6-209ENST00000538136 ARL17AQ8IVW1 177 aa4.93□□□□□ -1.62
MSH6-209ENST00000538136 A0A1B0GXF2 115 aa4.93□□□□□ -1.62
MSH6-209ENST00000538136 NDUFA1O15239 70 aa4.93□□□□□ -1.62
MSH6-209ENST00000538136 Q0VG73 95 aa4.93□□□□□ -1.62
MSH6-209ENST00000538136 MIAQ16674 131 aa4.93□□□□□ -1.62
MSH6-209ENST00000538136 POLR2KP53803 58 aaKnown RBP4.93□□□□□ -1.62
MSH6-209ENST00000538136 TRAV9-1A0A075B6T8 112 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 SYS1-DBNDD2H3BUS1 97 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 NCR3O14931 201 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 SEC11AP67812 179 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 SCRT2Q9NQ03 307 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 HINT1P49773 126 aaPredicted RBP4.92□□□□□ -1.62
MSH6-209ENST00000538136 XGP55808 180 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 HIST1H2BLQ99880 126 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 SMIM13P0DJ93 91 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 CARD19Q96LW7 228 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 PPDPFQ9H3Y8 114 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 SPANXA1Q9NS26 97 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 KIF25-AS1Q9Y6Z4 181 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 SMIM6P0DI80 62 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 HERVK_113P63121 156 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 NFE4Q86UQ8 179 aa4.92□□□□□ -1.62
MSH6-209ENST00000538136 PRR3P79522 188 aaKnown RBP4.91□□□□□ -1.62
MSH6-209ENST00000538136 CDC42SE2Q9NRR3 84 aa4.91□□□□□ -1.62
MSH6-209ENST00000538136 TRBV27A0A0K0K1C4 114 aa4.91□□□□□ -1.62
MSH6-209ENST00000538136 CHCHD1Q96BP2 118 aaKnown RBP4.91□□□□□ -1.62
MSH6-209ENST00000538136 PRSS47A8MTI9 375 aa4.91□□□□□ -1.62
MSH6-209ENST00000538136 CHCHD7Q9BUK0 85 aa4.91□□□□□ -1.62
MSH6-209ENST00000538136 LAMTOR2Q9Y2Q5 125 aa4.91□□□□□ -1.62
MSH6-209ENST00000538136 UBE2D4Q9Y2X8 147 aa4.91□□□□□ -1.62
MSH6-209ENST00000538136 MRPS16Q9Y3D3 137 aaKnown RBP4.91□□□□□ -1.62
MSH6-209ENST00000538136 C5orf52A6NGY3 159 aa4.9□□□□□ -1.62
MSH6-209ENST00000538136 F8VRH5 84 aa4.9□□□□□ -1.62
MSH6-209ENST00000538136 PKIAP61925 76 aa4.9□□□□□ -1.62
MSH6-209ENST00000538136 WFDC2Q14508 124 aa4.9□□□□□ -1.62
MSH6-209ENST00000538136 LGALS9CQ6DKI2 356 aa4.9□□□□□ -1.62
MSH6-209ENST00000538136 PCP2Q8IVA1 136 aa4.9□□□□□ -1.62
MSH6-209ENST00000538136 VPS25Q9BRG1 176 aa4.9□□□□□ -1.62
MSH6-209ENST00000538136 KRTAP1-5Q9BYS1 174 aa4.9□□□□□ -1.62
MSH6-209ENST00000538136 RPL32P62910 135 aaKnown RBP4.9□□□□□ -1.63
MSH6-209ENST00000538136 COX7B2Q8TF08 81 aa4.9□□□□□ -1.63
MSH6-209ENST00000538136 TSTD3H0UI37 97 aa4.89□□□□□ -1.63
MSH6-209ENST00000538136 ESDP10768 282 aa4.89□□□□□ -1.63
MSH6-209ENST00000538136 PIK3CD-AS1Q5SR53 167 aa4.89□□□□□ -1.63
MSH6-209ENST00000538136 MIR7-3HGQ8N6C7 128 aa4.89□□□□□ -1.63
MSH6-209ENST00000538136 J3QQQ9 107 aa4.89□□□□□ -1.63
MSH6-209ENST00000538136 ENHOQ6UWT2 76 aa4.89□□□□□ -1.63
MSH6-209ENST00000538136 PGPEP1Q9NXJ5 209 aa4.89□□□□□ -1.63
MSH6-209ENST00000538136 COX11Q9Y6N1 276 aa4.89□□□□□ -1.63
MSH6-209ENST00000538136 MYMXA0A1B0GTQ4 84 aa4.88□□□□□ -1.63
MSH6-209ENST00000538136 A0A1B0GV90 55 aa4.88□□□□□ -1.63
MSH6-209ENST00000538136 RTL8CO15255 209 aa4.88□□□□□ -1.63
MSH6-209ENST00000538136 UBE2AP49459 152 aa4.88□□□□□ -1.63
MSH6-209ENST00000538136 CD164L2Q6UWJ8 174 aa4.88□□□□□ -1.63
MSH6-209ENST00000538136 Q6ZRU5 148 aa4.88□□□□□ -1.63
MSH6-209ENST00000538136 LINC01556Q5JQF7 62 aa4.88□□□□□ -1.63
MSH6-209ENST00000538136 LINC00242Q5T6M2 205 aa4.88□□□□□ -1.63
MSH6-209ENST00000538136 HIST3H2BBQ8N257 126 aa4.87□□□□□ -1.63
MSH6-209ENST00000538136 NHP2Q9NX24 153 aaKnown RBP4.87□□□□□ -1.63
MSH6-209ENST00000538136 C10orf25Q5T742 122 aa4.87□□□□□ -1.63
MSH6-209ENST00000538136 SLC25A34Q6PIV7 304 aa4.87□□□□□ -1.63
MSH6-209ENST00000538136 IGHV1-58A0A0C4DH39 117 aa4.87□□□□□ -1.63
MSH6-209ENST00000538136 TOMM6Q96B49 74 aa4.87□□□□□ -1.63
MSH6-209ENST00000538136 LCE6AA0A183 80 aa4.87□□□□□ -1.63
MSH6-209ENST00000538136 PLNP26678 52 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms