RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 FREM1Q5H8C1 2179 aa8.12□□□□□ -1.11
LINC00346-201ENST00000538077 FAM236DA0A1B0GTK5 79 aa8.12□□□□□ -1.11
LINC00346-201ENST00000538077 UQCRQO14949 82 aa8.12□□□□□ -1.11
LINC00346-201ENST00000538077 FAM236CP0DP71 79 aa8.12□□□□□ -1.11
LINC00346-201ENST00000538077 LINC00643Q86TS7 51 aa8.12□□□□□ -1.11
LINC00346-201ENST00000538077 FAM240AA0A1B0GVK7 77 aa8.11□□□□□ -1.11
LINC00346-201ENST00000538077 KLLNB2CW77 178 aa8.11□□□□□ -1.11
LINC00346-201ENST00000538077 PRR3P79522 188 aaKnown RBP8.11□□□□□ -1.11
LINC00346-201ENST00000538077 NDUFC2-KCTD14E9PQ53 114 aa8.11□□□□□ -1.11
LINC00346-201ENST00000538077 COX6A2Q02221 97 aa8.11□□□□□ -1.11
LINC00346-201ENST00000538077 C10orf25Q5T742 122 aa8.11□□□□□ -1.11
LINC00346-201ENST00000538077 TRBV27A0A0K0K1C4 114 aa8.11□□□□□ -1.11
LINC00346-201ENST00000538077 LINC01556Q5JQF7 62 aa8.11□□□□□ -1.11
LINC00346-201ENST00000538077 ODF3L2Q3SX64 289 aa8.1□□□□□ -1.11
LINC00346-201ENST00000538077 UNQ6190/PRO20217Q6UXQ8 127 aa8.1□□□□□ -1.11
LINC00346-201ENST00000538077 COL4A2P08572 1712 aa8.1□□□□□ -1.11
LINC00346-201ENST00000538077 ZNF73O43830 326 aaPredicted RBP8.1□□□□□ -1.11
LINC00346-201ENST00000538077 C1orf137Q5JT78 98 aa8.1□□□□□ -1.11
LINC00346-201ENST00000538077 LINC00474Q9P2X8 69 aa8.1□□□□□ -1.11
LINC00346-201ENST00000538077 A0A1W2PPR1 153 aa8.09□□□□□ -1.11
LINC00346-201ENST00000538077 MRPS12O15235 138 aaKnown RBP8.09□□□□□ -1.11
LINC00346-201ENST00000538077 PLCE1Q9P212 2302 aa8.09□□□□□ -1.12
LINC00346-201ENST00000538077 REG3GQ6UW15 175 aa8.08□□□□□ -1.12
LINC00346-201ENST00000538077 X6R8D5 127 aa8.08□□□□□ -1.12
LINC00346-201ENST00000538077 CDC42SE2Q9NRR3 84 aa8.08□□□□□ -1.12
LINC00346-201ENST00000538077 PYGO1Q9Y3Y4 419 aa8.08□□□□□ -1.12
LINC00346-201ENST00000538077 NBASA2RRP1 2371 aa8.08□□□□□ -1.12
LINC00346-201ENST00000538077 IGLV4-60A0A075B6I1 120 aa8.07□□□□□ -1.12
LINC00346-201ENST00000538077 ESRGQ1W209 222 aa8.07□□□□□ -1.12
LINC00346-201ENST00000538077 C1orf134Q5TEV5 83 aa8.07□□□□□ -1.12
LINC00346-201ENST00000538077 ADAMTS20P59510 1910 aa8.07□□□□□ -1.12
LINC00346-201ENST00000538077 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
LINC00346-201ENST00000538077 TRBV30A0A0K0K1B3 111 aa8.06□□□□□ -1.12
LINC00346-201ENST00000538077 IGHV6-1A0A0B4J1U7 121 aa8.06□□□□□ -1.12
LINC00346-201ENST00000538077 MUC6Q6W4X9 2439 aa8.06□□□□□ -1.12
LINC00346-201ENST00000538077 Q6ZVQ6 151 aa8.05□□□□□ -1.12
LINC00346-201ENST00000538077 IGLV1-51P01701 117 aa8.05□□□□□ -1.12
LINC00346-201ENST00000538077 BRCA2P51587 3418 aa8.05□□□□□ -1.12
LINC00346-201ENST00000538077 RPL28P46779 137 aaKnown RBP8.05□□□□□ -1.12
LINC00346-201ENST00000538077 FHL2Q14192 279 aa8.05□□□□□ -1.12
LINC00346-201ENST00000538077 C1orf195Q5TG92 126 aa8.05□□□□□ -1.12
LINC00346-201ENST00000538077 EML5Q05BV3 1969 aa8.05□□□□□ -1.12
LINC00346-201ENST00000538077 COX17Q14061 63 aa8.04□□□□□ -1.12
LINC00346-201ENST00000538077 DEFB116Q30KQ4 102 aa8.04□□□□□ -1.12
LINC00346-201ENST00000538077 CELA1Q9UNI1 258 aa8.04□□□□□ -1.12
LINC00346-201ENST00000538077 Q6ZSN1 163 aa8.04□□□□□ -1.12
LINC00346-201ENST00000538077 K7ERS5 55 aa8.04□□□□□ -1.12
LINC00346-201ENST00000538077 Q8IZM0 81 aa8.04□□□□□ -1.12
LINC00346-201ENST00000538077 MRPS36P82909 103 aaKnown RBP8.04□□□□□ -1.12
LINC00346-201ENST00000538077 C16orf95Q9H693 158 aa8.04□□□□□ -1.12
LINC00346-201ENST00000538077 EXPH5Q8NEV8 1989 aa8.03□□□□□ -1.12
LINC00346-201ENST00000538077 TRBV10-3A0A0K0K1G6 114 aa8.03□□□□□ -1.12
LINC00346-201ENST00000538077 PRR15LQ9BU68 103 aa8.03□□□□□ -1.12
LINC00346-201ENST00000538077 CHCHD7Q9BUK0 85 aa8.03□□□□□ -1.12
LINC00346-201ENST00000538077 POLR2KP53803 58 aaKnown RBP8.02□□□□□ -1.13
LINC00346-201ENST00000538077 CPAMD8Q8IZJ3 1885 aa8.02□□□□□ -1.13
LINC00346-201ENST00000538077 SPTAN1Q13813 2472 aaKnown RBP8.01□□□□□ -1.13
LINC00346-201ENST00000538077 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
LINC00346-201ENST00000538077 MED13LQ71F56 2210 aa8.01□□□□□ -1.13
LINC00346-201ENST00000538077 A0A087WYN8 130 aa8.01□□□□□ -1.13
LINC00346-201ENST00000538077 LINC00242Q5T6M2 205 aa8□□□□□ -1.13
LINC00346-201ENST00000538077 SHANK1Q9Y566 2161 aa8□□□□□ -1.13
LINC00346-201ENST00000538077 TIMM17BO60830 172 aa8□□□□□ -1.13
LINC00346-201ENST00000538077 ZNF580Q9UK33 172 aa8□□□□□ -1.13
LINC00346-201ENST00000538077 NOTCH3Q9UM47 2321 aa8□□□□□ -1.13
LINC00346-201ENST00000538077 ATP5EP56381 51 aaPredicted RBP8□□□□□ -1.13
LINC00346-201ENST00000538077 LYPD5Q6UWN5 251 aa8□□□□□ -1.13
LINC00346-201ENST00000538077 HIVEP2P31629 2446 aa8□□□□□ -1.13
LINC00346-201ENST00000538077 Q9BRP9 147 aa7.99□□□□□ -1.13
LINC00346-201ENST00000538077 SPINK1P00995 79 aa7.99□□□□□ -1.13
LINC00346-201ENST00000538077 PTPRQQ9UMZ3 2332 aa7.99□□□□□ -1.13
LINC00346-201ENST00000538077 TNCP24821 2201 aa7.99□□□□□ -1.13
LINC00346-201ENST00000538077 ATP5EP2Q5VTU8 51 aa7.99□□□□□ -1.13
LINC00346-201ENST00000538077 CCDC179H3BU77 68 aa7.98□□□□□ -1.13
LINC00346-201ENST00000538077 Q8N9L7 120 aa7.98□□□□□ -1.13
LINC00346-201ENST00000538077 FSHBP01225 129 aa7.98□□□□□ -1.13
LINC00346-201ENST00000538077 C2orf91Q6ZV80 131 aa7.98□□□□□ -1.13
LINC00346-201ENST00000538077 A8MTW9 85 aa7.98□□□□□ -1.13
LINC00346-201ENST00000538077 ARHGAP32A7KAX9 2087 aa7.97□□□□□ -1.13
LINC00346-201ENST00000538077 SMIM1B2RUZ4 78 aa7.97□□□□□ -1.13
LINC00346-201ENST00000538077 IGIPA6NJ69 53 aa7.97□□□□□ -1.13
LINC00346-201ENST00000538077 LST1O00453 97 aa7.97□□□□□ -1.13
LINC00346-201ENST00000538077 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.97□□□□□ -1.13
LINC00346-201ENST00000538077 PRLHP81277 87 aa7.96□□□□□ -1.13
LINC00346-201ENST00000538077 FAM19A3Q7Z5A8 133 aa7.96□□□□□ -1.14
LINC00346-201ENST00000538077 TSPEAR-AS2P59090 65 aa7.96□□□□□ -1.14
LINC00346-201ENST00000538077 MDFIQ99750 246 aa7.96□□□□□ -1.14
LINC00346-201ENST00000538077 FHL3Q13643 280 aa7.96□□□□□ -1.14
LINC00346-201ENST00000538077 HCFC1P51610 2035 aa7.96□□□□□ -1.14
LINC00346-201ENST00000538077 XGP55808 180 aa7.95□□□□□ -1.14
LINC00346-201ENST00000538077 EGFEM1PQ0D2K5 195 aa7.95□□□□□ -1.14
LINC00346-201ENST00000538077 Q8N814 137 aa7.95□□□□□ -1.14
LINC00346-201ENST00000538077 OTOGLQ3ZCN5 2332 aa7.95□□□□□ -1.14
LINC00346-201ENST00000538077 SBSPONQ8IVN8 264 aa7.95□□□□□ -1.14
LINC00346-201ENST00000538077 PCOTHQ58A44 107 aa7.95□□□□□ -1.14
LINC00346-201ENST00000538077 A6NED7 52 aa7.95□□□□□ -1.14
LINC00346-201ENST00000538077 NDUFC1O43677 76 aa7.95□□□□□ -1.14
LINC00346-201ENST00000538077 SERP2Q8N6R1 65 aa7.95□□□□□ -1.14
LINC00346-201ENST00000538077 FAM208BQ5VWN6 2430 aa7.94□□□□□ -1.14
LINC00346-201ENST00000538077 YPEL4Q96NS1 127 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms