RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 RPL13AP40429 203 aaKnown RBP6.19□□□□□ -1.42
UBE3B-208ENST00000538070 NBEAL1Q6ZS30 2694 aa6.19□□□□□ -1.42
UBE3B-208ENST00000538070 A8MTW9 85 aa6.19□□□□□ -1.42
UBE3B-208ENST00000538070 XCL1P47992 114 aa6.19□□□□□ -1.42
UBE3B-208ENST00000538070 IGLV4-60A0A075B6I1 120 aa6.19□□□□□ -1.42
UBE3B-208ENST00000538070 IGLV10-54A0A075B6I4 117 aa6.19□□□□□ -1.42
UBE3B-208ENST00000538070 SMCPP49901 116 aaPredicted RBP6.19□□□□□ -1.42
UBE3B-208ENST00000538070 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 UBE2D3P61077 147 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 UBE2D2P62837 147 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 KRTAP21-3Q3LHN1 58 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 PIK3CD-AS1Q5SR53 167 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.18□□□□□ -1.42
UBE3B-208ENST00000538070 A0A1B0GV72 72 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 LINC00158P58513 81 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 HERVK_113P63121 156 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 DAZ2Q13117 558 aaKnown RBP6.18□□□□□ -1.42
UBE3B-208ENST00000538070 DAZ4Q86SG3 579 aaKnown RBP6.18□□□□□ -1.42
UBE3B-208ENST00000538070 DAZ3Q9NR90 486 aaKnown RBP6.18□□□□□ -1.42
UBE3B-208ENST00000538070 ANK3Q12955 4377 aaKnown RBP6.18□□□□□ -1.42
UBE3B-208ENST00000538070 COL6A5A8TX70 2615 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 TRIAP1O43715 76 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 SLC25A20O43772 301 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 HERV-K104P63124 156 aa6.18□□□□□ -1.42
UBE3B-208ENST00000538070 ANKRD29Q8N6D5 301 aa6.17□□□□□ -1.42
UBE3B-208ENST00000538070 MGAM2Q2M2H8 2515 aa6.17□□□□□ -1.42
UBE3B-208ENST00000538070 NTN5Q8WTR8 489 aaPredicted RBP6.17□□□□□ -1.42
UBE3B-208ENST00000538070 C19orf73Q9NVV2 129 aa6.17□□□□□ -1.42
UBE3B-208ENST00000538070 FAM222AQ5U5X8 452 aa6.17□□□□□ -1.42
UBE3B-208ENST00000538070 CDC42SE2Q9NRR3 84 aa6.17□□□□□ -1.42
UBE3B-208ENST00000538070 PRO0461Q9UI25 63 aa6.17□□□□□ -1.42
UBE3B-208ENST00000538070 MIAQ16674 131 aa6.16□□□□□ -1.42
UBE3B-208ENST00000538070 SIGMAR1Q99720 223 aa6.16□□□□□ -1.42
UBE3B-208ENST00000538070 FBN1P35555 2871 aaKnown RBP6.16□□□□□ -1.42
UBE3B-208ENST00000538070 PLAC8L1A1L4L8 177 aa6.16□□□□□ -1.42
UBE3B-208ENST00000538070 COX6CP09669 75 aa6.16□□□□□ -1.42
UBE3B-208ENST00000538070 CMC4P56277 68 aaPredicted RBP6.16□□□□□ -1.42
UBE3B-208ENST00000538070 FOXI1Q12951 378 aa6.16□□□□□ -1.42
UBE3B-208ENST00000538070 C16orf95Q9H693 158 aa6.16□□□□□ -1.42
UBE3B-208ENST00000538070 TRBV10-1A0A0K0K1A3 114 aa6.15□□□□□ -1.42
UBE3B-208ENST00000538070 F5H768 121 aa6.15□□□□□ -1.42
UBE3B-208ENST00000538070 ZFAND6Q6FIF0 208 aa6.15□□□□□ -1.42
UBE3B-208ENST00000538070 OR13C6PQ8NH95 151 aa6.15□□□□□ -1.42
UBE3B-208ENST00000538070 SMIM1B2RUZ4 78 aa6.15□□□□□ -1.42
UBE3B-208ENST00000538070 FHL2Q14192 279 aa6.15□□□□□ -1.42
UBE3B-208ENST00000538070 Q8N3U1 123 aa6.15□□□□□ -1.42
UBE3B-208ENST00000538070 ICOSQ9Y6W8 199 aa6.15□□□□□ -1.42
UBE3B-208ENST00000538070 LITAFQ99732 161 aa6.15□□□□□ -1.43
UBE3B-208ENST00000538070 TRBV20-1A0A075B6N2 111 aa6.14□□□□□ -1.43
UBE3B-208ENST00000538070 PAX4O43316 350 aa6.14□□□□□ -1.43
UBE3B-208ENST00000538070 ATP6V0E2Q8NHE4 81 aa6.14□□□□□ -1.43
UBE3B-208ENST00000538070 C6orf226Q5I0X4 101 aa6.14□□□□□ -1.43
UBE3B-208ENST00000538070 C2orf82Q6UX34 121 aa6.14□□□□□ -1.43
UBE3B-208ENST00000538070 TRBV6-8A0A0A6YYG3 113 aa6.14□□□□□ -1.43
UBE3B-208ENST00000538070 TEX49A0A1B0GTD5 131 aa6.14□□□□□ -1.43
UBE3B-208ENST00000538070 ATXN8Q156A1 80 aa6.14□□□□□ -1.43
UBE3B-208ENST00000538070 LINC01620Q4KN68 170 aa6.13□□□□□ -1.43
UBE3B-208ENST00000538070 CSNK1G2-AS1Q8NCQ2 148 aa6.13□□□□□ -1.43
UBE3B-208ENST00000538070 LINC00308Q8TCZ7 52 aa6.13□□□□□ -1.43
UBE3B-208ENST00000538070 TIRAPP58753 221 aa6.13□□□□□ -1.43
UBE3B-208ENST00000538070 DAD1P61803 113 aa6.13□□□□□ -1.43
UBE3B-208ENST00000538070 MIR7-3HGQ8N6C7 128 aa6.13□□□□□ -1.43
UBE3B-208ENST00000538070 A0A0B4J2C4 111 aa6.13□□□□□ -1.43
UBE3B-208ENST00000538070 LINC00526Q96FQ7 95 aa6.13□□□□□ -1.43
UBE3B-208ENST00000538070 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
UBE3B-208ENST00000538070 EDA2RQ9HAV5 297 aa6.13□□□□□ -1.43
UBE3B-208ENST00000538070 PKD1L1Q8TDX9 2849 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 TRBV6-4A0A1B0GX49 114 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 NDUFA1O15239 70 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 ANGP03950 147 aaKnown RBP6.12□□□□□ -1.43
UBE3B-208ENST00000538070 TEN1Q86WV5 123 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 PPDPFLQ8WWR9 84 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 CRYBA4P53673 196 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 COX7B2Q8TF08 81 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 FAM110AQ9BQ89 295 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 TRAV26-1A0A087WT03 109 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 SOSTDC1Q6X4U4 206 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 IL17DQ8TAD2 202 aa6.12□□□□□ -1.43
UBE3B-208ENST00000538070 OXLD1Q5BKU9 147 aa6.11□□□□□ -1.43
UBE3B-208ENST00000538070 LINC00269Q8N2A0 174 aa6.11□□□□□ -1.43
UBE3B-208ENST00000538070 MT-ATP8P03928 68 aa6.11□□□□□ -1.43
UBE3B-208ENST00000538070 IGHV4-28A0A0C4DH34 117 aa6.1□□□□□ -1.43
UBE3B-208ENST00000538070 C9orf66Q5T8R8 295 aa6.1□□□□□ -1.43
UBE3B-208ENST00000538070 SPANXDQ9BXN6 97 aa6.1□□□□□ -1.43
UBE3B-208ENST00000538070 Q9HAA7 133 aa6.1□□□□□ -1.43
UBE3B-208ENST00000538070 SPANXCQ9NY87 97 aa6.1□□□□□ -1.43
UBE3B-208ENST00000538070 RETNQ9HD89 108 aa6.1□□□□□ -1.43
UBE3B-208ENST00000538070 CELA1Q9UNI1 258 aa6.1□□□□□ -1.43
UBE3B-208ENST00000538070 PRO0255Q9UI72 69 aa6.09□□□□□ -1.43
UBE3B-208ENST00000538070 X6R8D5 127 aa6.09□□□□□ -1.43
UBE3B-208ENST00000538070 MALP21145 153 aa6.09□□□□□ -1.43
UBE3B-208ENST00000538070 SBSPONQ8IVN8 264 aa6.09□□□□□ -1.43
UBE3B-208ENST00000538070 OVOL2Q9BRP0 275 aa6.09□□□□□ -1.43
UBE3B-208ENST00000538070 SND1-IT1Q9HBX3 110 aa6.09□□□□□ -1.43
UBE3B-208ENST00000538070 CRPP02741 224 aa6.09□□□□□ -1.44
UBE3B-208ENST00000538070 SS18Q15532 418 aa6.09□□□□□ -1.44
UBE3B-208ENST00000538070 ATP5G1P05496 136 aa6.08□□□□□ -1.44
UBE3B-208ENST00000538070 PRR3P79522 188 aaKnown RBP6.08□□□□□ -1.44
UBE3B-208ENST00000538070 IGLV5-39A0A0G2JS06 123 aa6.08□□□□□ -1.44
UBE3B-208ENST00000538070 LINC00959A0A1B0GUT2 108 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms