RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 FAM104AQ969W3 186 aa3.83□□□□□ -1.8
NPIPB3-208ENST00000537983 OPRPNQ99935 248 aaPredicted RBP3.83□□□□□ -1.8
NPIPB3-208ENST00000537983 TP73-AS1Q9UF72 201 aa3.83□□□□□ -1.8
NPIPB3-208ENST00000537983 CELA1Q9UNI1 258 aa3.83□□□□□ -1.8
NPIPB3-208ENST00000537983 IGLV5-45A0A087WSX0 123 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 TRBV6-8A0A0A6YYG3 113 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 TRAV8-6A0A0B4J262 113 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 MYMXA0A1B0GTQ4 84 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 TMEM223A0PJW6 202 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 UBE2D1P51668 147 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 TCTAP57738 103 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 SEC11AP67812 179 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 BATFQ16520 125 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 KPRPQ5T749 579 aaPredicted RBP3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 AMMECR1LQ6DCA0 310 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 SH2D6Q7Z4S9 175 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 OR5A1Q8NGJ0 315 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 ATP6V0E2Q8NHE4 81 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 PLEKHB2Q96CS7 222 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 TMEM101Q96IK0 257 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 ATRQ13535 2644 aa3.82□□□□□ -1.8
NPIPB3-208ENST00000537983 A0A0J9YXV3 536 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 ZNF815PA8K554 130 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 H3BRM9 83 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 LEPROTO15243 131 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 DEFB4AO15263 64 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 HINT1P49773 126 aaPredicted RBP3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 HERVK_113P63121 156 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 TAL2Q16559 108 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 MPV17L2Q567V2 206 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 BVES-AS1Q5T3Y7 98 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 CEMP1Q6PRD7 247 aaPredicted RBP3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 GEMIN7Q9H840 131 aaKnown RBP3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 CDC42SE2Q9NRR3 84 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 NOTCH3Q9UM47 2321 aa3.81□□□□□ -1.8
NPIPB3-208ENST00000537983 A6NDN8 102 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 F5H768 121 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 H3BNG1 76 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 J3QQQ9 107 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 LGALS3P17931 250 aaKnown RBP3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 MRPL23Q16540 153 aaKnown RBP3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 RNASE13Q5GAN3 156 aaKnown RBP3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 LINC00469Q8N7U9 141 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 ORAOV1Q8WV07 137 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 VSIG2Q96IQ7 327 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 TTTY13Q9BZ97 58 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 RETNQ9HD89 108 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 ICOSQ9Y6W8 199 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 TENM1Q9UKZ4 2725 aa3.8□□□□□ -1.8
NPIPB3-208ENST00000537983 IGHV1-58A0A0C4DH39 117 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 TSPEAR-AS2P59090 65 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 GAGE2BQ13066 116 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 GAGE6Q13070 117 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 UBE2V1Q13404 147 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 C12orf74Q32Q52 190 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 GAGE2EQ4V326 116 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 GAGE2AQ6NT46 116 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 SCGB1D4Q6XE38 83 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 MAPKAPK5-AS1Q8N8E1 139 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 TM2D3Q9BRN9 247 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 SPANXB1Q9NS25 103 aaPredicted RBP3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 GAGE2DQ9UEU5 116 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 VWFP04275 2813 aa3.79□□□□□ -1.8
NPIPB3-208ENST00000537983 TRAV13-1A0A0B4J241 112 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 A0A0J9YY99 117 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 A0A1B0GV90 55 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 K7EIL1 84 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 IGHV3-30-3P0DP02 117 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 HTN3P15516 51 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 LINC00242Q5T6M2 205 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 LELP1Q5T871 98 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 CEND1Q8N111 149 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 HIST1H4GQ99525 98 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 CDKN2A-AS1Q9UH64 79 aa3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 FBN1P35555 2871 aaKnown RBP3.78□□□□□ -1.8
NPIPB3-208ENST00000537983 IGLV4-60A0A075B6I1 120 aa3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 A0A096LPF7 62 aa3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 A0A0J9YWU9 116 aa3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 SMIM1B2RUZ4 78 aa3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 TMEM238C9JI98 176 aa3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 CCL25O15444 150 aa3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 SPINK8P0C7L1 97 aa3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 RBX1P62877 108 aa3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 ZFAND6Q6FIF0 208 aa3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 Q6ZTC4 211 aa3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 NIPBLQ6KC79 2804 aaeCLIP3.77□□□□□ -1.81
NPIPB3-208ENST00000537983 IGHV3-64A0A075B6Q5 118 aa3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 TRAV8-3A0A0A6YYJ7 113 aa3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 TAX1BP3O14907 124 aa3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 NDUFA1O15239 70 aa3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 TIMM17BO60830 172 aa3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 FXYD2P54710 66 aa3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 RPL24P83731 157 aaKnown RBP3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 COX6A2Q02221 97 aa3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 LINC01561Q8N1V8 128 aa3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 C11orf45Q8TAV5 145 aa3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 NDUFA12Q9UI09 145 aa3.76□□□□□ -1.81
NPIPB3-208ENST00000537983 A0A087WZ39 114 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 TRAV10A0A0B4J240 114 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms