RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 FXYD3Q14802 87 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 SPATA8Q6RVD6 105 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 ANK2Q01484 3957 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 SVEP1Q4LDE5 3571 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 ITPR3Q14573 2671 aa1.05□□□□□ -2.24
PRKDC-208ENST00000536710 FXYD1O00168 92 aa1.05□□□□□ -2.24
PRKDC-208ENST00000536710 HLA-DRB4P13762 266 aa1.05□□□□□ -2.24
PRKDC-208ENST00000536710 GLYATL3Q5SZD4 288 aa1.05□□□□□ -2.24
PRKDC-208ENST00000536710 HLA-DRB4X5D2U9 266 aa1.05□□□□□ -2.24
PRKDC-208ENST00000536710 SETD2Q9BYW2 2564 aaPredicted RBP1.05□□□□□ -2.24
PRKDC-208ENST00000536710 MXRA5Q9NR99 2828 aa1.05□□□□□ -2.24
PRKDC-208ENST00000536710 POLQO75417 2590 aa1.04□□□□□ -2.24
PRKDC-208ENST00000536710 F8P00451 2351 aa1.04□□□□□ -2.24
PRKDC-208ENST00000536710 A0A0D9SG42 100 aa1.04□□□□□ -2.24
PRKDC-208ENST00000536710 APOC4-APOC2K7ER74 178 aa1.04□□□□□ -2.24
PRKDC-208ENST00000536710 APOC2P02655 101 aa1.04□□□□□ -2.24
PRKDC-208ENST00000536710 PIRTP0C851 137 aa1.04□□□□□ -2.24
PRKDC-208ENST00000536710 ZNF56Q15929 161 aa1.04□□□□□ -2.24
PRKDC-208ENST00000536710 DEFB109BQ30KR1 87 aa1.04□□□□□ -2.24
PRKDC-208ENST00000536710 FDCSPQ8NFU4 85 aa1.04□□□□□ -2.24
PRKDC-208ENST00000536710 DNAJC15Q9Y5T4 150 aa1.04□□□□□ -2.24
PRKDC-208ENST00000536710 FLNAP21333 2647 aaKnown RBP1.04□□□□□ -2.24
PRKDC-208ENST00000536710 MYO7BQ6PIF6 2116 aa1.03□□□□□ -2.24
PRKDC-208ENST00000536710 PCNX1Q96RV3 2341 aa1.03□□□□□ -2.24
PRKDC-208ENST00000536710 NBDYA0A0U1RRE5 68 aa1.03□□□□□ -2.24
PRKDC-208ENST00000536710 RBP4P02753 201 aa1.03□□□□□ -2.24
PRKDC-208ENST00000536710 AKR1D1P51857 326 aa1.03□□□□□ -2.24
PRKDC-208ENST00000536710 TFF3Q07654 80 aa1.03□□□□□ -2.24
PRKDC-208ENST00000536710 TANC2Q9HCD6 1990 aa1.03□□□□□ -2.25
PRKDC-208ENST00000536710 ANK3Q12955 4377 aaKnown RBP1.03□□□□□ -2.25
PRKDC-208ENST00000536710 DNAJC13O75165 2243 aa1.03□□□□□ -2.25
PRKDC-208ENST00000536710 PKDREJQ9NTG1 2253 aa1.03□□□□□ -2.25
PRKDC-208ENST00000536710 C2CD3Q4AC94 2353 aa1.03□□□□□ -2.25
PRKDC-208ENST00000536710 PKD1L1Q8TDX9 2849 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 CCL22O00626 93 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 LY6G6CO95867 125 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 DCDP81605 110 aaKnown RBP1.02□□□□□ -2.25
PRKDC-208ENST00000536710 DEFB110Q30KQ9 67 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 CLLU1Q5K131 121 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 MEGF8Q7Z7M0 2845 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 C5orf56Q8N8D9 126 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 LCN9Q8WX39 176 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 LZICQ8WZA0 190 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 CREBBPQ92793 2442 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 C10orf95Q9H7T3 257 aa1.02□□□□□ -2.25
PRKDC-208ENST00000536710 MTORP42345 2549 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 ANKHD1Q8IWZ3 2542 aaKnown RBP1.01□□□□□ -2.25
PRKDC-208ENST00000536710 CCDC168Q8NDH2 2452 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 ACANP16112 2415 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 NAV3Q8IVL0 2385 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 NINQ8N4C6 2090 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 CMYA5Q8N3K9 4069 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 TRRAPQ9Y4A5 3859 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 MIF4GDA9UHW6 222 aaKnown RBP1.01□□□□□ -2.25
PRKDC-208ENST00000536710 H0YGG7 62 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 CCKP06307 115 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 C10orf99Q6UWK7 81 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 SLC25A26Q70HW3 274 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 SNX29P2Q8IUI4 249 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 PROK2Q9HC23 129 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 TAS2R8Q9NYW2 309 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 ABCA2Q9BZC7 2435 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 NBEAL1Q6ZS30 2694 aa1.01□□□□□ -2.25
PRKDC-208ENST00000536710 ABCA4P78363 2273 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 COL6A5A8TX70 2615 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 NOTCH1P46531 2555 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 MPC1LP0DKB6 136 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 BTG2P78543 158 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 SPINK13Q1W4C9 94 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 MORN2Q502X0 79 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 TSLPQ969D9 159 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 GSKIPQ9P0R6 139 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 SPG11Q96JI7 2443 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 COL7A1Q02388 2944 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 VWFP04275 2813 aa1□□□□□ -2.25
PRKDC-208ENST00000536710 PRKDCP78527 4128 aaKnown RBP0.99□□□□□ -2.25
PRKDC-208ENST00000536710 ATRQ13535 2644 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 STAB1Q9NY15 2570 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 A0A096LNT2 108 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 TRBV10-1A0A0K0K1A3 114 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 DEFB108AA8MXU0 73 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 ARPC5O15511 151 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 STATHP02808 62 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 COX6B1P14854 86 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 C1orf54Q8WWF1 131 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 SMR3AQ99954 134 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 NOP16Q9Y3C1 178 aaKnown RBP0.99□□□□□ -2.25
PRKDC-208ENST00000536710 AKAP6Q13023 2319 aa0.99□□□□□ -2.25
PRKDC-208ENST00000536710 MUC4Q99102 2169 aa0.98□□□□□ -2.25
PRKDC-208ENST00000536710 TLN2Q9Y4G6 2542 aa0.98□□□□□ -2.25
PRKDC-208ENST00000536710 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.98□□□□□ -2.252e-9■■■■■ 76.5
PRKDC-208ENST00000536710 TFF1P04155 84 aa0.98□□□□□ -2.25
PRKDC-208ENST00000536710 CKS1BP61024 79 aa0.98□□□□□ -2.25
PRKDC-208ENST00000536710 PPDPFLQ8WWR9 84 aa0.98□□□□□ -2.25
PRKDC-208ENST00000536710 VPS25Q9BRG1 176 aa0.98□□□□□ -2.25
PRKDC-208ENST00000536710 DNAH3Q8TD57 4116 aa0.98□□□□□ -2.25
PRKDC-208ENST00000536710 TGP01266 2768 aa0.98□□□□□ -2.25
PRKDC-208ENST00000536710 PLCE1Q9P212 2302 aa0.98□□□□□ -2.25
PRKDC-208ENST00000536710 SONP18583 2426 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms