RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 NDFIP1Q9BT67 221 aa3.1□□□□□ -1.91
CLIP1-207ENST00000536634 GTSF1LQ9H1H1 148 aa3.1□□□□□ -1.91
CLIP1-207ENST00000536634 MTFP1Q9UDX5 166 aa3.1□□□□□ -1.91
CLIP1-207ENST00000536634 PXMP4Q9Y6I8 212 aa3.1□□□□□ -1.91
CLIP1-207ENST00000536634 IGKV2-40A0A087WW87 121 aaPredicted RBP3.09□□□□□ -1.91
CLIP1-207ENST00000536634 TAAR5O14804 337 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 IGKV2D-40P01614 121 aaPredicted RBP3.09□□□□□ -1.91
CLIP1-207ENST00000536634 GPX1P07203 203 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 PFN1P07737 140 aaKnown RBP3.09□□□□□ -1.91
CLIP1-207ENST00000536634 FAUP35544 74 aaKnown RBP3.09□□□□□ -1.91
CLIP1-207ENST00000536634 AMMECR1LQ6DCA0 310 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 GTF2H5Q6ZYL4 71 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 BPIFA4PQ86YQ2 179 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 SLC25A29Q8N8R3 303 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 TMEM229BQ8NBD8 167 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 INO80EQ8NBZ0 244 aaPredicted RBP3.09□□□□□ -1.91
CLIP1-207ENST00000536634 Q8TAT8 98 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 TVP23CQ96ET8 276 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 DERL1Q9BUN8 251 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 MAP1LC3CQ9BXW4 147 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 DPH3P1Q9H4G8 78 aa3.09□□□□□ -1.91
CLIP1-207ENST00000536634 IGHV3-73A0A0B4J1V6 119 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 GGTLC3B5MD39 225 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.08□□□□□ -1.92
CLIP1-207ENST00000536634 J3QR89 54 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 K7EP34 96 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 SYNGR2O43760 224 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 LINC00694P0DN24 101 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 HIST1H1EP10412 219 aaKnown RBP3.08□□□□□ -1.92
CLIP1-207ENST00000536634 HINT1P49773 126 aaPredicted RBP3.08□□□□□ -1.92
CLIP1-207ENST00000536634 SEC61GP60059 68 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 MEF2BQ02080 365 aaPredicted RBP3.08□□□□□ -1.92
CLIP1-207ENST00000536634 MRPL54Q6P161 138 aaKnown RBP3.08□□□□□ -1.92
CLIP1-207ENST00000536634 DPPA3Q6W0C5 159 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 Q6ZN92 141 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 EXOC3-AS1Q8N2X6 119 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 OR5A1Q8NGJ0 315 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 AQP10Q96PS8 301 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 TMEM126AQ9H061 195 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 NAT8BQ9UHF3 227 aa3.08□□□□□ -1.92
CLIP1-207ENST00000536634 TRBV19A0A075B6N1 114 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 TRAV8-1A0A0A6YYK1 113 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 A0A0U1RQV1 116 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 A0A1B0GWB2 263 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 A0A1W2PRE2 83 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 ZNF727A8MUV8 499 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 M0R2P5 195 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 COX7A2P2O60397 106 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 CHTF8P0CG12 524 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 UBE2MP61081 183 aaKnown RBP3.07□□□□□ -1.92
CLIP1-207ENST00000536634 CIRBPQ14011 172 aaKnown RBP3.07□□□□□ -1.92
CLIP1-207ENST00000536634 RHOHQ15669 191 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 SPATA45Q537H7 98 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 FAM162BQ5T6X4 162 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 RNASEKQ6P5S7 137 aaKnown RBP3.07□□□□□ -1.92
CLIP1-207ENST00000536634 SDIM1Q6ZPB5 146 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 C9orf163Q8N9P6 203 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 UBE2WQ96B02 151 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 BTF3L4Q96K17 158 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 MGST2Q99735 147 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 WDR61Q9GZS3 305 aaKnown RBP3.07□□□□□ -1.92
CLIP1-207ENST00000536634 NPVFQ9HCQ7 196 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 ZNF492Q9P255 531 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 CRCT1Q9UGL9 99 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 CYSLTR1Q9Y271 337 aa3.07□□□□□ -1.92
CLIP1-207ENST00000536634 BORCS7-ASMTA0A0B4J1R7 106 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 TRBV6-4A0A1B0GX49 114 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 MAP1LC3B2A6NCE7 125 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 FABP5P3A8MUU1 101 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 GNRH2O43555 120 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 SFT2D2O95562 160 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 SRP19P09132 144 aaKnown RBP3.06□□□□□ -1.92
CLIP1-207ENST00000536634 SEC11BP0C7V7 166 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 PYYP10082 97 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 SLC25A6P12236 298 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 PRR3P79522 188 aaKnown RBP3.06□□□□□ -1.92
CLIP1-207ENST00000536634 SSBP1Q04837 148 aaKnown RBP3.06□□□□□ -1.92
CLIP1-207ENST00000536634 CFAP126Q5VTH2 177 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 C10orf113Q5VZT2 155 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 OR10G9Q8NGN4 311 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 PPP1R1CQ8WVI7 109 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 RMI2Q96E14 147 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 ZC2HC1AQ96GY0 325 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 ANAPC13Q9BS18 74 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 PRADC1Q9BSG0 188 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 NMES1Q9C002 83 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 MAP1LC3BQ9GZQ8 125 aa3.06□□□□□ -1.92
CLIP1-207ENST00000536634 EIF5A2Q9GZV4 153 aaKnown RBP3.06□□□□□ -1.92
CLIP1-207ENST00000536634 A0A1B0GX51 115 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 DUXBA0A1W2PPF3 345 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 HMGB3O15347 200 aaKnown RBP3.05□□□□□ -1.92
CLIP1-207ENST00000536634 SSSCA1O60232 199 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 AKAIN1P0CW23 69 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 ZNF138P52744 262 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 PMCHL1Q16048 86 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 BVES-AS1Q5T3Y7 98 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 MIC13Q5XKP0 118 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 Q6AWC8 147 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 TMEM14EPQ6UXP3 125 aa3.05□□□□□ -1.92
CLIP1-207ENST00000536634 SPACA4Q8TDM5 124 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms