RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ATOX1O00244 68 aa12.92□□□□□ -0.34
RAB40C-203ENST00000535977 CMC4P56277 68 aaPredicted RBP12.92□□□□□ -0.34
RAB40C-203ENST00000535977 C4orf26Q17RF5 130 aa12.92□□□□□ -0.34
RAB40C-203ENST00000535977 PROK1P58294 105 aa12.92□□□□□ -0.34
RAB40C-203ENST00000535977 DAND5Q8N907 189 aa12.92□□□□□ -0.34
RAB40C-203ENST00000535977 PDZD2O15018 2839 aa12.92□□□□□ -0.34
RAB40C-203ENST00000535977 DNAJC9-AS1A6NH13 148 aa12.91□□□□□ -0.34
RAB40C-203ENST00000535977 STHQ8IWL8 128 aa12.91□□□□□ -0.34
RAB40C-203ENST00000535977 CREBBPQ92793 2442 aa12.91□□□□□ -0.34
RAB40C-203ENST00000535977 ZNF469Q96JG9 3925 aaPredicted RBP12.91□□□□□ -0.34
RAB40C-203ENST00000535977 F5H768 121 aa12.9□□□□□ -0.34
RAB40C-203ENST00000535977 CITED2Q99967 270 aaPredicted RBP12.9□□□□□ -0.34
RAB40C-203ENST00000535977 IGHV1-58A0A0C4DH39 117 aa12.9□□□□□ -0.34
RAB40C-203ENST00000535977 DSCR8Q96T75 97 aa12.9□□□□□ -0.34
RAB40C-203ENST00000535977 CCL24O00175 119 aa12.9□□□□□ -0.35
RAB40C-203ENST00000535977 CHCHD7Q9BUK0 85 aa12.9□□□□□ -0.35
RAB40C-203ENST00000535977 TINCRA0A1B0GVN0 87 aa12.89□□□□□ -0.35
RAB40C-203ENST00000535977 TIRAPP58753 221 aa12.89□□□□□ -0.35
RAB40C-203ENST00000535977 TMEM258P61165 79 aa12.89□□□□□ -0.35
RAB40C-203ENST00000535977 HRCT1Q6UXD1 115 aa12.89□□□□□ -0.35
RAB40C-203ENST00000535977 Q6ZSN1 163 aa12.89□□□□□ -0.35
RAB40C-203ENST00000535977 ZANQ9Y493 2812 aa12.88□□□□□ -0.35
RAB40C-203ENST00000535977 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
RAB40C-203ENST00000535977 UBE2D4Q9Y2X8 147 aa12.88□□□□□ -0.35
RAB40C-203ENST00000535977 TRAV13-1A0A0B4J241 112 aa12.88□□□□□ -0.35
RAB40C-203ENST00000535977 COX7A2LO14548 114 aa12.88□□□□□ -0.35
RAB40C-203ENST00000535977 FAM104AQ969W3 186 aa12.88□□□□□ -0.35
RAB40C-203ENST00000535977 PRM2P04554 102 aa12.87□□□□□ -0.35
RAB40C-203ENST00000535977 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
RAB40C-203ENST00000535977 BAALC-AS2P0C853 105 aa12.86□□□□□ -0.35
RAB40C-203ENST00000535977 VSIG2Q96IQ7 327 aa12.86□□□□□ -0.35
RAB40C-203ENST00000535977 ITPR3Q14573 2671 aa12.86□□□□□ -0.35
RAB40C-203ENST00000535977 ACANP16112 2415 aa12.86□□□□□ -0.35
RAB40C-203ENST00000535977 RPL18AQ02543 176 aaKnown RBP12.86□□□□□ -0.35
RAB40C-203ENST00000535977 RNASE13Q5GAN3 156 aaKnown RBP12.86□□□□□ -0.35
RAB40C-203ENST00000535977 Q5XG85 94 aa12.86□□□□□ -0.35
RAB40C-203ENST00000535977 WFDC11Q8NEX6 87 aa12.86□□□□□ -0.35
RAB40C-203ENST00000535977 XCL2Q9UBD3 114 aa12.86□□□□□ -0.35
RAB40C-203ENST00000535977 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
RAB40C-203ENST00000535977 IL17DQ8TAD2 202 aa12.85□□□□□ -0.35
RAB40C-203ENST00000535977 C16orf95Q9H693 158 aa12.85□□□□□ -0.35
RAB40C-203ENST00000535977 MAST4O15021 2626 aa12.85□□□□□ -0.35
RAB40C-203ENST00000535977 AKAP9Q99996 3911 aa12.85□□□□□ -0.35
RAB40C-203ENST00000535977 TLN2Q9Y4G6 2542 aa12.85□□□□□ -0.35
RAB40C-203ENST00000535977 UPK3BQ9BT76 320 aa12.84□□□□□ -0.35
RAB40C-203ENST00000535977 MXRA5Q9NR99 2828 aa12.84□□□□□ -0.35
RAB40C-203ENST00000535977 C1orf158Q8N1D5 194 aa12.84□□□□□ -0.35
RAB40C-203ENST00000535977 TRBV10-1A0A0K0K1A3 114 aa12.83□□□□□ -0.36
RAB40C-203ENST00000535977 CYSRT1A8MQ03 144 aa12.82□□□□□ -0.36
RAB40C-203ENST00000535977 ESM1Q9NQ30 184 aa12.82□□□□□ -0.36
RAB40C-203ENST00000535977 A0A1W2PRX2 142 aa12.82□□□□□ -0.36
RAB40C-203ENST00000535977 SERP2Q8N6R1 65 aa12.82□□□□□ -0.36
RAB40C-203ENST00000535977 Q9UF83 564 aa12.82□□□□□ -0.36
RAB40C-203ENST00000535977 OTOGQ6ZRI0 2925 aa12.81□□□□□ -0.36
RAB40C-203ENST00000535977 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.81□□□□□ -0.36
RAB40C-203ENST00000535977 IGKV2-29A2NJV5 120 aaPredicted RBP12.81□□□□□ -0.36
RAB40C-203ENST00000535977 TIMM17BO60830 172 aa12.81□□□□□ -0.36
RAB40C-203ENST00000535977 FLNAP21333 2647 aaKnown RBP12.81□□□□□ -0.36
RAB40C-203ENST00000535977 RNASE1P07998 156 aaKnown RBP12.8□□□□□ -0.36
RAB40C-203ENST00000535977 RPL36AP83881 106 aaKnown RBP12.8□□□□□ -0.36
RAB40C-203ENST00000535977 DGAT2L7PQ6IED9 249 aa12.8□□□□□ -0.36
RAB40C-203ENST00000535977 RPL36ALQ969Q0 106 aaKnown RBP12.8□□□□□ -0.36
RAB40C-203ENST00000535977 TRGV1A0A0A0MS02 117 aa12.8□□□□□ -0.36
RAB40C-203ENST00000535977 IGKV3D-7A0A0C4DH55 119 aa12.8□□□□□ -0.36
RAB40C-203ENST00000535977 INAFM2P0DMQ5 153 aa12.8□□□□□ -0.36
RAB40C-203ENST00000535977 FAM218AQ96MZ4 157 aa12.79□□□□□ -0.36
RAB40C-203ENST00000535977 LINC00308Q8TCZ7 52 aa12.79□□□□□ -0.36
RAB40C-203ENST00000535977 IGHV3OR16-12A0A075B7B8 117 aa12.78□□□□□ -0.36
RAB40C-203ENST00000535977 IGLV5-45A0A087WSX0 123 aa12.78□□□□□ -0.36
RAB40C-203ENST00000535977 A0A087WVE0 104 aa12.78□□□□□ -0.36
RAB40C-203ENST00000535977 IGHV3-38A0A0C4DH36 116 aa12.78□□□□□ -0.36
RAB40C-203ENST00000535977 LINC01006Q8NI28 216 aa12.78□□□□□ -0.36
RAB40C-203ENST00000535977 C11orf44Q8N8P7 122 aa12.78□□□□□ -0.36
RAB40C-203ENST00000535977 A0A0U1RRA0 63 aa12.77□□□□□ -0.37
RAB40C-203ENST00000535977 K7EQD1 137 aa12.77□□□□□ -0.37
RAB40C-203ENST00000535977 FAM222AQ5U5X8 452 aa12.77□□□□□ -0.37
RAB40C-203ENST00000535977 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
RAB40C-203ENST00000535977 FAM19A3Q7Z5A8 133 aa12.76□□□□□ -0.37
RAB40C-203ENST00000535977 Q9HAA7 133 aa12.76□□□□□ -0.37
RAB40C-203ENST00000535977 C16orf74Q96GX8 76 aa12.75□□□□□ -0.37
RAB40C-203ENST00000535977 NDUFA1O15239 70 aa12.74□□□□□ -0.37
RAB40C-203ENST00000535977 MRAPQ8TCY5 172 aa12.74□□□□□ -0.37
RAB40C-203ENST00000535977 ZNF625Q96I27 306 aaPredicted RBP12.74□□□□□ -0.37
RAB40C-203ENST00000535977 MALP21145 153 aa12.74□□□□□ -0.37
RAB40C-203ENST00000535977 KRTAP1-1Q07627 177 aa12.74□□□□□ -0.37
RAB40C-203ENST00000535977 CIRBPQ14011 172 aaKnown RBP12.74□□□□□ -0.37
RAB40C-203ENST00000535977 SOSTDC1Q6X4U4 206 aa12.74□□□□□ -0.37
RAB40C-203ENST00000535977 LINC01561Q8N1V8 128 aa12.74□□□□□ -0.37
RAB40C-203ENST00000535977 USP17L23D6RBM5 183 aa12.73□□□□□ -0.37
RAB40C-203ENST00000535977 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
RAB40C-203ENST00000535977 PRIMA1Q86XR5 153 aa12.73□□□□□ -0.37
RAB40C-203ENST00000535977 DNAL4O96015 105 aa12.73□□□□□ -0.37
RAB40C-203ENST00000535977 Q6ZTI0 123 aa12.73□□□□□ -0.37
RAB40C-203ENST00000535977 Q6JHZ5 121 aa12.72□□□□□ -0.37
RAB40C-203ENST00000535977 CDKN2A-AS1Q9UH64 79 aa12.72□□□□□ -0.37
RAB40C-203ENST00000535977 SONP18583 2426 aaKnown RBP12.72□□□□□ -0.37
RAB40C-203ENST00000535977 TEP1Q99973 2627 aaKnown RBP12.72□□□□□ -0.37
RAB40C-203ENST00000535977 MTORP42345 2549 aa12.71□□□□□ -0.37
RAB40C-203ENST00000535977 C9orf129Q5T035 196 aaKnown RBP12.71□□□□□ -0.37
RAB40C-203ENST00000535977 LINC00846Q9NV44 126 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms