RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 PLAC8L1A1L4L8 177 aa13.26□□□□□ -0.29
CHPF-203ENST00000535926 PLA2G2AP14555 144 aa13.26□□□□□ -0.29
CHPF-203ENST00000535926 NHLRC4P0CG21 123 aaPredicted RBP13.25□□□□□ -0.29
CHPF-203ENST00000535926 MEIG1Q5JSS6 88 aa13.25□□□□□ -0.29
CHPF-203ENST00000535926 ZNF843Q8N446 348 aa13.25□□□□□ -0.29
CHPF-203ENST00000535926 C15orf53Q8NAA6 179 aa13.25□□□□□ -0.29
CHPF-203ENST00000535926 SHISA2Q6UWI4 295 aa13.24□□□□□ -0.29
CHPF-203ENST00000535926 DEFB121Q5J5C9 76 aa13.24□□□□□ -0.29
CHPF-203ENST00000535926 GAGE7O76087 117 aa13.23□□□□□ -0.29
CHPF-203ENST00000535926 GAGE12FP0CL80 117 aa13.23□□□□□ -0.29
CHPF-203ENST00000535926 GAGE12GP0CL81 117 aa13.23□□□□□ -0.29
CHPF-203ENST00000535926 GAGE12IP0CL82 117 aa13.23□□□□□ -0.29
CHPF-203ENST00000535926 WFDC11Q8NEX6 87 aa13.23□□□□□ -0.29
CHPF-203ENST00000535926 COX7A2LO14548 114 aa13.22□□□□□ -0.29
CHPF-203ENST00000535926 TMEM243Q9BU79 118 aa13.22□□□□□ -0.29
CHPF-203ENST00000535926 FLNAP21333 2647 aaKnown RBP13.21□□□□□ -0.29
CHPF-203ENST00000535926 TRGV2A0A075B6R0 118 aa13.21□□□□□ -0.3
CHPF-203ENST00000535926 UBE2L6O14933 153 aa13.21□□□□□ -0.3
CHPF-203ENST00000535926 RPL35AP18077 110 aaKnown RBP13.21□□□□□ -0.3
CHPF-203ENST00000535926 TTC32Q5I0X7 151 aa13.21□□□□□ -0.3
CHPF-203ENST00000535926 NDUFV3P56181 108 aaKnown RBP13.2□□□□□ -0.3
CHPF-203ENST00000535926 HERV-K104P63124 156 aa13.18□□□□□ -0.3
CHPF-203ENST00000535926 C19orf73Q9NVV2 129 aa13.18□□□□□ -0.3
CHPF-203ENST00000535926 IGKV3OR2-268A0A0C4DH90 116 aa13.17□□□□□ -0.3
CHPF-203ENST00000535926 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
CHPF-203ENST00000535926 C16orf74Q96GX8 76 aa13.17□□□□□ -0.3
CHPF-203ENST00000535926 FAM218AQ96MZ4 157 aa13.17□□□□□ -0.3
CHPF-203ENST00000535926 GAGE6Q13070 117 aa13.17□□□□□ -0.3
CHPF-203ENST00000535926 Q6Q795 121 aa13.17□□□□□ -0.3
CHPF-203ENST00000535926 CSNK1G2-AS1Q8NCQ2 148 aa13.17□□□□□ -0.3
CHPF-203ENST00000535926 IGLV4-60A0A075B6I1 120 aa13.16□□□□□ -0.3
CHPF-203ENST00000535926 LINC01006Q8NI28 216 aa13.16□□□□□ -0.3
CHPF-203ENST00000535926 FAM240AA0A1B0GVK7 77 aa13.16□□□□□ -0.3
CHPF-203ENST00000535926 TRBV6-4A0A1B0GX49 114 aa13.15□□□□□ -0.3
CHPF-203ENST00000535926 ANK3Q12955 4377 aaKnown RBP13.15□□□□□ -0.3
CHPF-203ENST00000535926 ACANP16112 2415 aa13.15□□□□□ -0.3
CHPF-203ENST00000535926 MTORP42345 2549 aa13.14□□□□□ -0.31
CHPF-203ENST00000535926 TRGV4A0A0C4DH28 118 aa13.14□□□□□ -0.31
CHPF-203ENST00000535926 MIR7-3HGQ8N6C7 128 aa13.14□□□□□ -0.31
CHPF-203ENST00000535926 COX7B2Q8TF08 81 aa13.14□□□□□ -0.31
CHPF-203ENST00000535926 OVOL2Q9BRP0 275 aa13.14□□□□□ -0.31
CHPF-203ENST00000535926 TOMM7Q9P0U1 55 aa13.14□□□□□ -0.31
CHPF-203ENST00000535926 C22orf24Q9Y442 160 aa13.14□□□□□ -0.31
CHPF-203ENST00000535926 IGLV1-51P01701 117 aa13.13□□□□□ -0.31
CHPF-203ENST00000535926 FHL2Q14192 279 aa13.13□□□□□ -0.31
CHPF-203ENST00000535926 LINC00337Q8N6G1 96 aa13.12□□□□□ -0.31
CHPF-203ENST00000535926 IGKV2-28A0A075B6P5 120 aa13.12□□□□□ -0.31
CHPF-203ENST00000535926 IGKV2D-28P01615 120 aa13.12□□□□□ -0.31
CHPF-203ENST00000535926 BAALC-AS2P0C853 105 aa13.11□□□□□ -0.31
CHPF-203ENST00000535926 HIST2H2BCQ6DN03 193 aa13.11□□□□□ -0.31
CHPF-203ENST00000535926 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
CHPF-203ENST00000535926 TRACP01848 142 aa13.11□□□□□ -0.31
CHPF-203ENST00000535926 MRPL23Q16540 153 aaKnown RBP13.11□□□□□ -0.31
CHPF-203ENST00000535926 IGHV3OR16-9A0A0B4J2B5 98 aa13.1□□□□□ -0.31
CHPF-203ENST00000535926 CMC4P56277 68 aaPredicted RBP13.1□□□□□ -0.31
CHPF-203ENST00000535926 B5MCH6 92 aa13.09□□□□□ -0.31
CHPF-203ENST00000535926 CCDC179H3BU77 68 aa13.09□□□□□ -0.31
CHPF-203ENST00000535926 PPDPFQ9H3Y8 114 aa13.09□□□□□ -0.31
CHPF-203ENST00000535926 CHCHD5Q9BSY4 110 aa13.09□□□□□ -0.31
CHPF-203ENST00000535926 Q9HAA7 133 aa13.09□□□□□ -0.31
CHPF-203ENST00000535926 SND1-IT1Q9HBX3 110 aa13.09□□□□□ -0.31
CHPF-203ENST00000535926 RPL28P46779 137 aaKnown RBP13.08□□□□□ -0.32
CHPF-203ENST00000535926 TRAV13-2A0A0B4J235 113 aa13.08□□□□□ -0.32
CHPF-203ENST00000535926 KRTAP1-1Q07627 177 aa13.08□□□□□ -0.32
CHPF-203ENST00000535926 FAM110AQ9BQ89 295 aa13.08□□□□□ -0.32
CHPF-203ENST00000535926 LINC00158P58513 81 aa13.07□□□□□ -0.32
CHPF-203ENST00000535926 C5orf38Q86SI9 138 aa13.07□□□□□ -0.32
CHPF-203ENST00000535926 SMCR5Q8TEV8 140 aa13.07□□□□□ -0.32
CHPF-203ENST00000535926 CRPP02741 224 aa13.06□□□□□ -0.32
CHPF-203ENST00000535926 CCL18P55774 89 aa13.06□□□□□ -0.32
CHPF-203ENST00000535926 C16orf95Q9H693 158 aa13.06□□□□□ -0.32
CHPF-203ENST00000535926 SS18L2Q9UHA2 77 aa13.06□□□□□ -0.32
CHPF-203ENST00000535926 FN1P02751 2386 aaKnown RBP13.06□□□□□ -0.32
CHPF-203ENST00000535926 PF4P02776 101 aa13.06□□□□□ -0.32
CHPF-203ENST00000535926 A0A087WZ39 114 aa13.05□□□□□ -0.32
CHPF-203ENST00000535926 RNASE1P07998 156 aaKnown RBP13.05□□□□□ -0.32
CHPF-203ENST00000535926 DEFB130BP0DP73 79 aa13.05□□□□□ -0.32
CHPF-203ENST00000535926 DEFB130AP0DP74 79 aa13.05□□□□□ -0.32
CHPF-203ENST00000535926 PDZD2O15018 2839 aa13.05□□□□□ -0.32
CHPF-203ENST00000535926 TENM4Q6N022 2769 aa13.04□□□□□ -0.32
CHPF-203ENST00000535926 TRBV7-7A0A0K0K1E9 115 aa13.04□□□□□ -0.32
CHPF-203ENST00000535926 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
CHPF-203ENST00000535926 SMIM11BQ8TCY0 68 aa13.04□□□□□ -0.32
CHPF-203ENST00000535926 PFN2P35080 140 aa13.04□□□□□ -0.32
CHPF-203ENST00000535926 NBEAL2Q6ZNJ1 2754 aa13.03□□□□□ -0.32
CHPF-203ENST00000535926 ACYP1P07311 99 aa13.03□□□□□ -0.32
CHPF-203ENST00000535926 A0A087WYN8 130 aa13.02□□□□□ -0.32
CHPF-203ENST00000535926 LINC00959A0A1B0GUT2 108 aa13.02□□□□□ -0.33
CHPF-203ENST00000535926 IBA57-AS1B1ANH7 110 aa13.01□□□□□ -0.33
CHPF-203ENST00000535926 MALP21145 153 aa13.01□□□□□ -0.33
CHPF-203ENST00000535926 C9orf129Q5T035 196 aaKnown RBP13□□□□□ -0.33
CHPF-203ENST00000535926 C11orf68Q9H3H3 251 aaKnown RBP13□□□□□ -0.33
CHPF-203ENST00000535926 ITPR2Q14571 2701 aa12.99□□□□□ -0.33
CHPF-203ENST00000535926 GCN1Q92616 2671 aaKnown RBP12.99□□□□□ -0.33
CHPF-203ENST00000535926 SDIM1Q6ZPB5 146 aa12.98□□□□□ -0.33
CHPF-203ENST00000535926 ATP5G1P05496 136 aa12.98□□□□□ -0.33
CHPF-203ENST00000535926 GYPEP15421 78 aa12.98□□□□□ -0.33
CHPF-203ENST00000535926 XCL1P47992 114 aa12.97□□□□□ -0.33
CHPF-203ENST00000535926 C6orf226Q5I0X4 101 aa12.97□□□□□ -0.33
CHPF-203ENST00000535926 PAX4O43316 350 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms