RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CIDEAO60543 219 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 HERVK_113P63121 156 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 LINC00242Q5T6M2 205 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 C9orf66Q5T8R8 295 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 RNF183Q96D59 192 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 TRBV30A0A0K0K1B3 111 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 M0QXV9 152 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 NDUFA1O15239 70 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 CARD19Q96LW7 228 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 CDC42SE2Q9NRR3 84 aa9.44□□□□□ -0.9
VPS33B-202ENST00000535906 TEP1Q99973 2627 aaKnown RBP9.43□□□□□ -0.9
VPS33B-202ENST00000535906 DEFB130BP0DP73 79 aa9.43□□□□□ -0.9
VPS33B-202ENST00000535906 DEFB130AP0DP74 79 aa9.43□□□□□ -0.9
VPS33B-202ENST00000535906 SMAGPQ0VAQ4 97 aa9.43□□□□□ -0.9
VPS33B-202ENST00000535906 IGLV5-39A0A0G2JS06 123 aa9.43□□□□□ -0.9
VPS33B-202ENST00000535906 SLC25A20O43772 301 aa9.43□□□□□ -0.9
VPS33B-202ENST00000535906 X6R8D5 127 aa9.43□□□□□ -0.9
VPS33B-202ENST00000535906 TRAV13-1A0A0B4J241 112 aa9.42□□□□□ -0.9
VPS33B-202ENST00000535906 IFITM1P13164 125 aa9.42□□□□□ -0.9
VPS33B-202ENST00000535906 ATXN8Q156A1 80 aa9.42□□□□□ -0.9
VPS33B-202ENST00000535906 ANKRD29Q8N6D5 301 aa9.42□□□□□ -0.9
VPS33B-202ENST00000535906 CITED1Q99966 193 aa9.42□□□□□ -0.9
VPS33B-202ENST00000535906 TMEM243Q9BU79 118 aa9.42□□□□□ -0.9
VPS33B-202ENST00000535906 C9JAW5 83 aa9.42□□□□□ -0.9
VPS33B-202ENST00000535906 TRIAP1O43715 76 aa9.42□□□□□ -0.9
VPS33B-202ENST00000535906 KIR2DL5BQ8NHK3 375 aa9.42□□□□□ -0.9
VPS33B-202ENST00000535906 UBE2L6O14933 153 aa9.41□□□□□ -0.9
VPS33B-202ENST00000535906 NPC2P61916 151 aa9.41□□□□□ -0.9
VPS33B-202ENST00000535906 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
VPS33B-202ENST00000535906 CIRBPQ14011 172 aaKnown RBP9.4□□□□□ -0.9
VPS33B-202ENST00000535906 LINC00612Q8N6U2 182 aa9.4□□□□□ -0.9
VPS33B-202ENST00000535906 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
VPS33B-202ENST00000535906 LINC01620Q4KN68 170 aa9.4□□□□□ -0.91
VPS33B-202ENST00000535906 SMIM1B2RUZ4 78 aa9.39□□□□□ -0.91
VPS33B-202ENST00000535906 Q9H8V8 135 aa9.39□□□□□ -0.91
VPS33B-202ENST00000535906 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
VPS33B-202ENST00000535906 DAND5Q8N907 189 aa9.39□□□□□ -0.91
VPS33B-202ENST00000535906 LINC01600Q96MT4 127 aa9.39□□□□□ -0.91
VPS33B-202ENST00000535906 GAGE6Q13070 117 aa9.38□□□□□ -0.91
VPS33B-202ENST00000535906 SMIM9A6NGZ8 99 aa9.37□□□□□ -0.91
VPS33B-202ENST00000535906 H7C423 109 aa9.37□□□□□ -0.91
VPS33B-202ENST00000535906 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
VPS33B-202ENST00000535906 COX6CP09669 75 aa9.37□□□□□ -0.91
VPS33B-202ENST00000535906 IGLV4-60A0A075B6I1 120 aa9.36□□□□□ -0.91
VPS33B-202ENST00000535906 F5H768 121 aa9.36□□□□□ -0.91
VPS33B-202ENST00000535906 TRBV10-2A0A0K0K1G8 114 aa9.36□□□□□ -0.91
VPS33B-202ENST00000535906 FAM222AQ5U5X8 452 aa9.36□□□□□ -0.91
VPS33B-202ENST00000535906 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
VPS33B-202ENST00000535906 DEFB4AO15263 64 aa9.35□□□□□ -0.91
VPS33B-202ENST00000535906 RPL13AP40429 203 aaKnown RBP9.35□□□□□ -0.91
VPS33B-202ENST00000535906 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
VPS33B-202ENST00000535906 GYPEP15421 78 aa9.35□□□□□ -0.91
VPS33B-202ENST00000535906 ZNF625Q96I27 306 aaPredicted RBP9.35□□□□□ -0.91
VPS33B-202ENST00000535906 COPS9Q8WXC6 57 aa9.34□□□□□ -0.91
VPS33B-202ENST00000535906 F8P00451 2351 aa9.34□□□□□ -0.91
VPS33B-202ENST00000535906 IGKV3OR2-268A0A0C4DH90 116 aa9.33□□□□□ -0.92
VPS33B-202ENST00000535906 TMEM262E9PQX1 116 aa9.33□□□□□ -0.92
VPS33B-202ENST00000535906 PRIMA1Q86XR5 153 aa9.33□□□□□ -0.92
VPS33B-202ENST00000535906 WFDC9Q8NEX5 89 aa9.33□□□□□ -0.92
VPS33B-202ENST00000535906 NTN5Q8WTR8 489 aaPredicted RBP9.33□□□□□ -0.92
VPS33B-202ENST00000535906 APOC4P55056 127 aa9.33□□□□□ -0.92
VPS33B-202ENST00000535906 HERV-K104P63124 156 aa9.33□□□□□ -0.92
VPS33B-202ENST00000535906 PRO0255Q9UI72 69 aa9.33□□□□□ -0.92
VPS33B-202ENST00000535906 LYRM9A8MSI8 78 aa9.32□□□□□ -0.92
VPS33B-202ENST00000535906 LST1O00453 97 aa9.32□□□□□ -0.92
VPS33B-202ENST00000535906 XGP55808 180 aa9.32□□□□□ -0.92
VPS33B-202ENST00000535906 FLNBO75369 2602 aaKnown RBP9.32□□□□□ -0.92
VPS33B-202ENST00000535906 IGHV4-28A0A0C4DH34 117 aa9.32□□□□□ -0.92
VPS33B-202ENST00000535906 A0A0U1RRA0 63 aa9.32□□□□□ -0.92
VPS33B-202ENST00000535906 MT-ATP8P03928 68 aa9.32□□□□□ -0.92
VPS33B-202ENST00000535906 MEIG1Q5JSS6 88 aa9.32□□□□□ -0.92
VPS33B-202ENST00000535906 A0A096LPF7 62 aa9.31□□□□□ -0.92
VPS33B-202ENST00000535906 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
VPS33B-202ENST00000535906 CLEC2BQ92478 149 aa9.31□□□□□ -0.92
VPS33B-202ENST00000535906 H3BT86 120 aa9.31□□□□□ -0.92
VPS33B-202ENST00000535906 C2orf82Q6UX34 121 aa9.31□□□□□ -0.92
VPS33B-202ENST00000535906 PPDPFQ9H3Y8 114 aa9.3□□□□□ -0.92
VPS33B-202ENST00000535906 TEX49A0A1B0GTD5 131 aa9.3□□□□□ -0.92
VPS33B-202ENST00000535906 PAX4O43316 350 aa9.29□□□□□ -0.92
VPS33B-202ENST00000535906 WIPF1O43516 503 aa9.29□□□□□ -0.92
VPS33B-202ENST00000535906 Q8NAQ8 132 aa9.29□□□□□ -0.92
VPS33B-202ENST00000535906 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
VPS33B-202ENST00000535906 CELA1Q9UNI1 258 aa9.29□□□□□ -0.92
VPS33B-202ENST00000535906 IGHV3OR16-9A0A0B4J2B5 98 aa9.29□□□□□ -0.92
VPS33B-202ENST00000535906 IGHV4-30-4P0DP06 118 aa9.29□□□□□ -0.92
VPS33B-202ENST00000535906 COX7B2Q8TF08 81 aa9.27□□□□□ -0.92
VPS33B-202ENST00000535906 DAD1P61803 113 aa9.27□□□□□ -0.93
VPS33B-202ENST00000535906 SHISA2Q6UWI4 295 aa9.27□□□□□ -0.93
VPS33B-202ENST00000535906 LINC00959A0A1B0GUT2 108 aa9.26□□□□□ -0.93
VPS33B-202ENST00000535906 A0A1B0GV72 72 aa9.26□□□□□ -0.93
VPS33B-202ENST00000535906 COX7A2LO14548 114 aa9.26□□□□□ -0.93
VPS33B-202ENST00000535906 MIFP14174 115 aa9.26□□□□□ -0.93
VPS33B-202ENST00000535906 A0A1B0GUV1 79 aa9.26□□□□□ -0.93
VPS33B-202ENST00000535906 TOMM7Q9P0U1 55 aa9.25□□□□□ -0.93
VPS33B-202ENST00000535906 A0A087WZ39 114 aa9.25□□□□□ -0.93
VPS33B-202ENST00000535906 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
VPS33B-202ENST00000535906 C5orf38Q86SI9 138 aa9.25□□□□□ -0.93
VPS33B-202ENST00000535906 FBN1P35555 2871 aaKnown RBP9.25□□□□□ -0.93
VPS33B-202ENST00000535906 TRAV26-1A0A087WT03 109 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms