RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 C15orf53Q8NAA6 179 aa13.91□□□□□ -0.18
TNFRSF1A-205ENST00000534885 SIVA1O15304 175 aa13.91□□□□□ -0.18
TNFRSF1A-205ENST00000534885 COX6A2Q02221 97 aa13.91□□□□□ -0.18
TNFRSF1A-205ENST00000534885 PCP2Q8IVA1 136 aa13.91□□□□□ -0.18
TNFRSF1A-205ENST00000534885 TTTY13Q9BZ97 58 aa13.91□□□□□ -0.18
TNFRSF1A-205ENST00000534885 CFAP161Q6P656 301 aa13.9□□□□□ -0.18
TNFRSF1A-205ENST00000534885 WFDC10BQ8IUB3 73 aa13.9□□□□□ -0.18
TNFRSF1A-205ENST00000534885 CLPSL2Q6UWE3 100 aa13.89□□□□□ -0.19
TNFRSF1A-205ENST00000534885 GEMIN7Q9H840 131 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-205ENST00000534885 TRAV8-6A0A0B4J262 113 aa13.89□□□□□ -0.19
TNFRSF1A-205ENST00000534885 FAM19A3Q7Z5A8 133 aa13.89□□□□□ -0.19
TNFRSF1A-205ENST00000534885 FBN3Q75N90 2809 aa13.88□□□□□ -0.19
TNFRSF1A-205ENST00000534885 E9PLD3 99 aa13.88□□□□□ -0.19
TNFRSF1A-205ENST00000534885 TMEM223A0PJW6 202 aa13.87□□□□□ -0.19
TNFRSF1A-205ENST00000534885 ANGP03950 147 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-205ENST00000534885 CDKN2A-AS1Q9UH64 79 aa13.87□□□□□ -0.19
TNFRSF1A-205ENST00000534885 HSD52Q0P140 79 aa13.87□□□□□ -0.19
TNFRSF1A-205ENST00000534885 LINC00269Q8N2A0 174 aa13.87□□□□□ -0.19
TNFRSF1A-205ENST00000534885 IGHV3-64A0A075B6Q5 118 aa13.86□□□□□ -0.19
TNFRSF1A-205ENST00000534885 IGLV5-45A0A087WSX0 123 aa13.86□□□□□ -0.19
TNFRSF1A-205ENST00000534885 HERVK_113P61574 105 aa13.86□□□□□ -0.19
TNFRSF1A-205ENST00000534885 HERVK_113P63121 156 aa13.86□□□□□ -0.19
TNFRSF1A-205ENST00000534885 LINC00959A0A1B0GUT2 108 aa13.85□□□□□ -0.19
TNFRSF1A-205ENST00000534885 A6NDN8 102 aa13.85□□□□□ -0.19
TNFRSF1A-205ENST00000534885 CSMD3Q7Z407 3707 aa13.84□□□□□ -0.19
TNFRSF1A-205ENST00000534885 H3BRM9 83 aa13.84□□□□□ -0.19
TNFRSF1A-205ENST00000534885 IGHV3-30P01768 117 aa13.84□□□□□ -0.19
TNFRSF1A-205ENST00000534885 IGHV3-33P01772 117 aa13.84□□□□□ -0.19
TNFRSF1A-205ENST00000534885 IGHV3-30-3P0DP02 117 aa13.84□□□□□ -0.19
TNFRSF1A-205ENST00000534885 IGHV3-30-5P0DP03 117 aa13.84□□□□□ -0.19
TNFRSF1A-205ENST00000534885 TRAV8-3A0A0A6YYJ7 113 aa13.83□□□□□ -0.2
TNFRSF1A-205ENST00000534885 SPINK8P0C7L1 97 aa13.83□□□□□ -0.2
TNFRSF1A-205ENST00000534885 TSPEAR-AS2P59090 65 aa13.83□□□□□ -0.2
TNFRSF1A-205ENST00000534885 REG3AQ06141 175 aa13.83□□□□□ -0.2
TNFRSF1A-205ENST00000534885 MAPKAPK5-AS1Q8N8E1 139 aa13.83□□□□□ -0.2
TNFRSF1A-205ENST00000534885 KLK12Q9UKR0 248 aa13.82□□□□□ -0.2
TNFRSF1A-205ENST00000534885 LINC00588Q9Y4M8 146 aa13.82□□□□□ -0.2
TNFRSF1A-205ENST00000534885 OCIAD2Q56VL3 154 aa13.81□□□□□ -0.2
TNFRSF1A-205ENST00000534885 C9orf118A6NHY6 69 aa13.81□□□□□ -0.2
TNFRSF1A-205ENST00000534885 K7ERU9 68 aa13.8□□□□□ -0.2
TNFRSF1A-205ENST00000534885 DYNC2H1Q8NCM8 4307 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-205ENST00000534885 XCL1P47992 114 aa13.79□□□□□ -0.2
TNFRSF1A-205ENST00000534885 SS18Q15532 418 aa13.79□□□□□ -0.2
TNFRSF1A-205ENST00000534885 HIGD1BQ9P298 99 aa13.79□□□□□ -0.2
TNFRSF1A-205ENST00000534885 DNAH7Q8WXX0 4024 aa13.79□□□□□ -0.2
TNFRSF1A-205ENST00000534885 IGLV10-54A0A075B6I4 117 aa13.78□□□□□ -0.2
TNFRSF1A-205ENST00000534885 IGHV3OR16-9A0A0B4J2B5 98 aa13.78□□□□□ -0.2
TNFRSF1A-205ENST00000534885 IGHV1-58A0A0C4DH39 117 aa13.78□□□□□ -0.2
TNFRSF1A-205ENST00000534885 J3QQQ9 107 aa13.78□□□□□ -0.2
TNFRSF1A-205ENST00000534885 LEPROTO15243 131 aa13.78□□□□□ -0.2
TNFRSF1A-205ENST00000534885 PRR34Q9NV39 138 aa13.78□□□□□ -0.2
TNFRSF1A-205ENST00000534885 CCL18P55774 89 aa13.78□□□□□ -0.2
TNFRSF1A-205ENST00000534885 GAGE10A6NGK3 116 aa13.77□□□□□ -0.21
TNFRSF1A-205ENST00000534885 SMIM1B2RUZ4 78 aa13.77□□□□□ -0.21
TNFRSF1A-205ENST00000534885 ENHOQ6UWT2 76 aa13.77□□□□□ -0.21
TNFRSF1A-205ENST00000534885 LYSTQ99698 3801 aa13.77□□□□□ -0.21
TNFRSF1A-205ENST00000534885 LINC01556Q5JQF7 62 aa13.76□□□□□ -0.21
TNFRSF1A-205ENST00000534885 APLNQ9ULZ1 77 aa13.76□□□□□ -0.21
TNFRSF1A-205ENST00000534885 MYMXA0A1B0GTQ4 84 aa13.76□□□□□ -0.21
TNFRSF1A-205ENST00000534885 ZNF815PA8K554 130 aa13.76□□□□□ -0.21
TNFRSF1A-205ENST00000534885 LGALS3P17931 250 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-205ENST00000534885 GTF2H5Q6ZYL4 71 aa13.75□□□□□ -0.21
TNFRSF1A-205ENST00000534885 C5orf38Q86SI9 138 aa13.75□□□□□ -0.21
TNFRSF1A-205ENST00000534885 CHCHD10Q8WYQ3 142 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-205ENST00000534885 NUPR2A6NF83 97 aa13.75□□□□□ -0.21
TNFRSF1A-205ENST00000534885 H3BUT2 72 aa13.75□□□□□ -0.21
TNFRSF1A-205ENST00000534885 UBE2WQ96B02 151 aa13.75□□□□□ -0.21
TNFRSF1A-205ENST00000534885 PLEKHB2Q96CS7 222 aa13.75□□□□□ -0.21
TNFRSF1A-205ENST00000534885 IGLV5-39A0A0G2JS06 123 aa13.74□□□□□ -0.21
TNFRSF1A-205ENST00000534885 DNAH10OSP0CZ25 163 aa13.73□□□□□ -0.21
TNFRSF1A-205ENST00000534885 A0A087WZ39 114 aa13.73□□□□□ -0.21
TNFRSF1A-205ENST00000534885 CRPP02741 224 aa13.72□□□□□ -0.21
TNFRSF1A-205ENST00000534885 RAB37Q96AX2 223 aa13.72□□□□□ -0.21
TNFRSF1A-205ENST00000534885 TGP01266 2768 aa13.72□□□□□ -0.21
TNFRSF1A-205ENST00000534885 TENM2Q9NT68 2774 aa13.72□□□□□ -0.21
TNFRSF1A-205ENST00000534885 K7EP34 96 aa13.71□□□□□ -0.21
TNFRSF1A-205ENST00000534885 SMIM13P0DJ93 91 aa13.71□□□□□ -0.21
TNFRSF1A-205ENST00000534885 GCSHP23434 173 aa13.71□□□□□ -0.21
TNFRSF1A-205ENST00000534885 CD164L2Q6UWJ8 174 aa13.71□□□□□ -0.21
TNFRSF1A-205ENST00000534885 NAA38Q9BRA0 125 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-205ENST00000534885 UPK3BQ9BT76 320 aa13.71□□□□□ -0.21
TNFRSF1A-205ENST00000534885 STARD9Q9P2P6 4700 aa13.7□□□□□ -0.22
TNFRSF1A-205ENST00000534885 KLK5Q9Y337 293 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-205ENST00000534885 FXYD2P54710 66 aa13.7□□□□□ -0.22
TNFRSF1A-205ENST00000534885 A0A1W2PPM0 123 aa13.69□□□□□ -0.22
TNFRSF1A-205ENST00000534885 PLECQ15149 4684 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-205ENST00000534885 ZFAND6Q6FIF0 208 aa13.68□□□□□ -0.22
TNFRSF1A-205ENST00000534885 NDUFA12Q9UI09 145 aa13.68□□□□□ -0.22
TNFRSF1A-205ENST00000534885 FOXI1Q12951 378 aa13.68□□□□□ -0.22
TNFRSF1A-205ENST00000534885 SCGB1D4Q6XE38 83 aa13.68□□□□□ -0.22
TNFRSF1A-205ENST00000534885 C10orf126Q8N4M7 172 aa13.68□□□□□ -0.22
TNFRSF1A-205ENST00000534885 TM2D2Q9BX73 214 aa13.68□□□□□ -0.22
TNFRSF1A-205ENST00000534885 GAGE12HA6NDE8 117 aa13.67□□□□□ -0.22
TNFRSF1A-205ENST00000534885 SCGB1A1P11684 91 aa13.67□□□□□ -0.22
TNFRSF1A-205ENST00000534885 MIAQ16674 131 aa13.67□□□□□ -0.22
TNFRSF1A-205ENST00000534885 CEND1Q8N111 149 aa13.67□□□□□ -0.22
TNFRSF1A-205ENST00000534885 COX7A2LO14548 114 aa13.67□□□□□ -0.22
TNFRSF1A-205ENST00000534885 Q9H8V8 135 aa13.67□□□□□ -0.22
TNFRSF1A-205ENST00000534885 TRAV8-4A0A0B4J246 113 aa13.66□□□□□ -0.22
TNFRSF1A-205ENST00000534885 TAL2Q16559 108 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 729 ms