RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 CDKN2A-AS1Q9UH64 79 aa7.86□□□□□ -1.15
COLCA1-203ENST00000532918 IGLV2-8P01709 118 aa7.86□□□□□ -1.15
COLCA1-203ENST00000532918 PRO0628Q9UI54 55 aa7.86□□□□□ -1.15
COLCA1-203ENST00000532918 A0A0J9YXY3 114 aa7.85□□□□□ -1.15
COLCA1-203ENST00000532918 DHRS4-AS1Q9P1J3 65 aa7.85□□□□□ -1.15
COLCA1-203ENST00000532918 PRR4Q16378 134 aa7.85□□□□□ -1.15
COLCA1-203ENST00000532918 PRRC2AP48634 2157 aaKnown RBP7.85□□□□□ -1.15
COLCA1-203ENST00000532918 ODF3L2Q3SX64 289 aa7.85□□□□□ -1.15
COLCA1-203ENST00000532918 NCOA6Q14686 2063 aaPredicted RBP7.85□□□□□ -1.15
COLCA1-203ENST00000532918 M0R378 163 aa7.85□□□□□ -1.15
COLCA1-203ENST00000532918 WFDC10BQ8IUB3 73 aa7.84□□□□□ -1.15
COLCA1-203ENST00000532918 MRPS12O15235 138 aaKnown RBP7.84□□□□□ -1.15
COLCA1-203ENST00000532918 A0A096LNI7 61 aa7.84□□□□□ -1.16
COLCA1-203ENST00000532918 TRIAP1O43715 76 aa7.83□□□□□ -1.16
COLCA1-203ENST00000532918 C1orf134Q5TEV5 83 aa7.83□□□□□ -1.16
COLCA1-203ENST00000532918 XAGE1AQ9HD64 81 aa7.83□□□□□ -1.16
COLCA1-203ENST00000532918 LINC00959A0A1B0GUT2 108 aa7.83□□□□□ -1.16
COLCA1-203ENST00000532918 TMEM223A0PJW6 202 aa7.83□□□□□ -1.16
COLCA1-203ENST00000532918 UBE2D3P61077 147 aa7.83□□□□□ -1.16
COLCA1-203ENST00000532918 CCDC168Q8NDH2 2452 aa7.83□□□□□ -1.16
COLCA1-203ENST00000532918 A0A1W2PPR1 153 aa7.83□□□□□ -1.16
COLCA1-203ENST00000532918 IGLV5-52A0A0A0MRZ9 124 aa7.83□□□□□ -1.16
COLCA1-203ENST00000532918 ZNF22P17026 224 aaPredicted RBP7.83□□□□□ -1.16
COLCA1-203ENST00000532918 Q6Q795 121 aa7.82□□□□□ -1.16
COLCA1-203ENST00000532918 RNASE3P12724 160 aaKnown RBP7.82□□□□□ -1.16
COLCA1-203ENST00000532918 XGP55808 180 aa7.82□□□□□ -1.16
COLCA1-203ENST00000532918 PROK1P58294 105 aa7.82□□□□□ -1.16
COLCA1-203ENST00000532918 SOSTDC1Q6X4U4 206 aa7.82□□□□□ -1.16
COLCA1-203ENST00000532918 TRBV30A0A0K0K1B3 111 aa7.82□□□□□ -1.16
COLCA1-203ENST00000532918 UBE2D2P62837 147 aa7.82□□□□□ -1.16
COLCA1-203ENST00000532918 IGF2RP11717 2491 aa7.82□□□□□ -1.16
COLCA1-203ENST00000532918 COX17Q14061 63 aa7.82□□□□□ -1.16
COLCA1-203ENST00000532918 PTPRSQ13332 1948 aa7.81□□□□□ -1.16
COLCA1-203ENST00000532918 CSDC2Q9Y534 153 aaKnown RBP7.81□□□□□ -1.16
COLCA1-203ENST00000532918 PLAC8L1A1L4L8 177 aa7.81□□□□□ -1.16
COLCA1-203ENST00000532918 RPL28P46779 137 aaKnown RBP7.81□□□□□ -1.16
COLCA1-203ENST00000532918 YPEL4Q96NS1 127 aa7.81□□□□□ -1.16
COLCA1-203ENST00000532918 LOC100131303A0A0U1RQF7 123 aa7.8□□□□□ -1.16
COLCA1-203ENST00000532918 CRIP1P50238 77 aa7.8□□□□□ -1.16
COLCA1-203ENST00000532918 TSHBP01222 138 aa7.79□□□□□ -1.16
COLCA1-203ENST00000532918 SLPIP03973 132 aa7.79□□□□□ -1.16
COLCA1-203ENST00000532918 LINC00308Q8TCZ7 52 aa7.79□□□□□ -1.16
COLCA1-203ENST00000532918 LINC00526Q96FQ7 95 aa7.79□□□□□ -1.16
COLCA1-203ENST00000532918 CCKP06307 115 aa7.79□□□□□ -1.16
COLCA1-203ENST00000532918 Q6ZTC4 211 aa7.78□□□□□ -1.16
COLCA1-203ENST00000532918 TNRC6BQ9UPQ9 1833 aaKnown RBP7.78□□□□□ -1.16
COLCA1-203ENST00000532918 WNK1Q9H4A3 2382 aa7.78□□□□□ -1.16
COLCA1-203ENST00000532918 IGLV2-11P01706 119 aa7.78□□□□□ -1.16
COLCA1-203ENST00000532918 Q8IZM0 81 aa7.78□□□□□ -1.16
COLCA1-203ENST00000532918 RNF185Q96GF1 192 aa7.78□□□□□ -1.16
COLCA1-203ENST00000532918 PRR9Q5T870 116 aa7.77□□□□□ -1.17
COLCA1-203ENST00000532918 IGKV2-28A0A075B6P5 120 aa7.77□□□□□ -1.17
COLCA1-203ENST00000532918 IGKV2D-28P01615 120 aa7.77□□□□□ -1.17
COLCA1-203ENST00000532918 Q6JHZ5 121 aa7.77□□□□□ -1.17
COLCA1-203ENST00000532918 TRAV7A0A075B6U4 112 aa7.77□□□□□ -1.17
COLCA1-203ENST00000532918 EDN2P20800 178 aa7.76□□□□□ -1.17
COLCA1-203ENST00000532918 EGFEM1PQ0D2K5 195 aa7.76□□□□□ -1.17
COLCA1-203ENST00000532918 PRR14LQ5THK1 2151 aa7.76□□□□□ -1.17
COLCA1-203ENST00000532918 WFDC13Q8IUB5 93 aa7.76□□□□□ -1.17
COLCA1-203ENST00000532918 SORL1Q92673 2214 aa7.76□□□□□ -1.17
COLCA1-203ENST00000532918 Q8N2B8 174 aa7.75□□□□□ -1.17
COLCA1-203ENST00000532918 ADAMTS20P59510 1910 aa7.75□□□□□ -1.17
COLCA1-203ENST00000532918 C6orf99Q4VX62 202 aa7.75□□□□□ -1.17
COLCA1-203ENST00000532918 C1orf158Q8N1D5 194 aa7.75□□□□□ -1.17
COLCA1-203ENST00000532918 MYO18BQ8IUG5 2567 aa7.75□□□□□ -1.17
COLCA1-203ENST00000532918 POLR2KP53803 58 aaKnown RBP7.75□□□□□ -1.17
COLCA1-203ENST00000532918 PPDPFQ9H3Y8 114 aa7.74□□□□□ -1.17
COLCA1-203ENST00000532918 CDC42SE2Q9NRR3 84 aa7.74□□□□□ -1.17
COLCA1-203ENST00000532918 C3orf84H3BNL1 204 aa7.74□□□□□ -1.17
COLCA1-203ENST00000532918 FHL3Q13643 280 aa7.74□□□□□ -1.17
COLCA1-203ENST00000532918 PSPHP1O15172 72 aa7.74□□□□□ -1.17
COLCA1-203ENST00000532918 C11orf21Q9P2W6 132 aa7.73□□□□□ -1.17
COLCA1-203ENST00000532918 PCNX3Q9H6A9 2034 aa7.73□□□□□ -1.17
COLCA1-203ENST00000532918 CYSRT1A8MQ03 144 aa7.73□□□□□ -1.17
COLCA1-203ENST00000532918 NRACQ8N912 160 aa7.73□□□□□ -1.17
COLCA1-203ENST00000532918 LST1O00453 97 aa7.72□□□□□ -1.17
COLCA1-203ENST00000532918 FHL2Q14192 279 aa7.72□□□□□ -1.17
COLCA1-203ENST00000532918 FAM30AQ9NZY2 134 aa7.72□□□□□ -1.17
COLCA1-203ENST00000532918 SPINK6Q6UWN8 80 aa7.72□□□□□ -1.17
COLCA1-203ENST00000532918 RPL37AP8A6NKH3 93 aa7.71□□□□□ -1.17
COLCA1-203ENST00000532918 ZNF73O43830 326 aaPredicted RBP7.71□□□□□ -1.18
COLCA1-203ENST00000532918 PRM2P04554 102 aa7.71□□□□□ -1.18
COLCA1-203ENST00000532918 TP73-AS1Q9UF72 201 aa7.71□□□□□ -1.18
COLCA1-203ENST00000532918 IGLV9-49A0A0B4J1Y8 123 aa7.71□□□□□ -1.18
COLCA1-203ENST00000532918 MAPKAPK5-AS1Q8N8E1 139 aa7.71□□□□□ -1.18
COLCA1-203ENST00000532918 CNFNQ9BYD5 112 aa7.7□□□□□ -1.18
COLCA1-203ENST00000532918 C10orf25Q5T742 122 aa7.7□□□□□ -1.18
COLCA1-203ENST00000532918 ABCA2Q9BZC7 2435 aa7.7□□□□□ -1.18
COLCA1-203ENST00000532918 PRYO14603 147 aa7.7□□□□□ -1.18
COLCA1-203ENST00000532918 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-203ENST00000532918 H3BS24 57 aa7.69□□□□□ -1.18
COLCA1-203ENST00000532918 BEAN1Q3B7T3 259 aa7.68□□□□□ -1.18
COLCA1-203ENST00000532918 LYPD5Q6UWN5 251 aa7.68□□□□□ -1.18
COLCA1-203ENST00000532918 C2orf48Q96LS8 159 aa7.68□□□□□ -1.18
COLCA1-203ENST00000532918 REG3GQ6UW15 175 aa7.68□□□□□ -1.18
COLCA1-203ENST00000532918 CXCL6P80162 114 aa7.68□□□□□ -1.18
COLCA1-203ENST00000532918 C6orf223Q8N319 242 aa7.68□□□□□ -1.18
COLCA1-203ENST00000532918 TRBV7-6A0A0J9YX20 115 aa7.67□□□□□ -1.18
COLCA1-203ENST00000532918 TRBV7-7A0A0K0K1E9 115 aa7.67□□□□□ -1.18
COLCA1-203ENST00000532918 Q6ZQY7 126 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms