RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 COL5A1-AS1Q5SY13 56 aa8.19□□□□□ -1.1
TRAF3IP2-211ENST00000528599 LINC00269Q8N2A0 174 aa8.19□□□□□ -1.1
TRAF3IP2-211ENST00000528599 IBA57-AS1B1ANH7 110 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 NPSP0C0P6 89 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 MRPS36P82909 103 aaKnown RBP8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 PAPPA-AS1Q5QFB9 102 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 CLPSL2Q6UWE3 100 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 ENHOQ6UWT2 76 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 CHTOPQ9Y3Y2 248 aaKnown RBP8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 DNAH6Q9C0G6 4158 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 PRSS29PA6NIE9 313 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 K7EP13 123 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 ZC2HC1BQ5TFG8 222 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 Q6ZR54 194 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 C10orf126Q8N4M7 172 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 PRR34Q9NV39 138 aa8.18□□□□□ -1.1
TRAF3IP2-211ENST00000528599 EPPK1P58107 5090 aaKnown RBP8.17□□□□□ -1.1
TRAF3IP2-211ENST00000528599 A0A1B0GV90 55 aa8.17□□□□□ -1.1
TRAF3IP2-211ENST00000528599 REG3AQ06141 175 aa8.17□□□□□ -1.1
TRAF3IP2-211ENST00000528599 PMVKQ15126 192 aa8.17□□□□□ -1.1
TRAF3IP2-211ENST00000528599 TTC32Q5I0X7 151 aa8.17□□□□□ -1.1
TRAF3IP2-211ENST00000528599 C2orf91Q6ZV80 131 aa8.17□□□□□ -1.1
TRAF3IP2-211ENST00000528599 UBE2WQ96B02 151 aa8.17□□□□□ -1.1
TRAF3IP2-211ENST00000528599 IGKV3OR2-268A0A0C4DH90 116 aa8.16□□□□□ -1.1
TRAF3IP2-211ENST00000528599 AMELXQ99217 191 aa8.15□□□□□ -1.1
TRAF3IP2-211ENST00000528599 CST9LQ9H4G1 147 aa8.15□□□□□ -1.1
TRAF3IP2-211ENST00000528599 Q9HAA7 133 aa8.15□□□□□ -1.1
TRAF3IP2-211ENST00000528599 HIGD1BQ9P298 99 aa8.15□□□□□ -1.1
TRAF3IP2-211ENST00000528599 CRPP02741 224 aa8.14□□□□□ -1.11
TRAF3IP2-211ENST00000528599 VCX2Q9H322 139 aa8.14□□□□□ -1.11
TRAF3IP2-211ENST00000528599 DNAH10Q8IVF4 4471 aa8.14□□□□□ -1.11
TRAF3IP2-211ENST00000528599 LINC00959A0A1B0GUT2 108 aa8.14□□□□□ -1.11
TRAF3IP2-211ENST00000528599 NMUP48645 174 aa8.14□□□□□ -1.11
TRAF3IP2-211ENST00000528599 HINT1P49773 126 aaPredicted RBP8.14□□□□□ -1.11
TRAF3IP2-211ENST00000528599 BVES-AS1Q5T3Y7 98 aa8.14□□□□□ -1.11
TRAF3IP2-211ENST00000528599 FAT2Q9NYQ8 4349 aa8.13□□□□□ -1.11
TRAF3IP2-211ENST00000528599 IGLV10-54A0A075B6I4 117 aa8.13□□□□□ -1.11
TRAF3IP2-211ENST00000528599 IGKV2D-26A0A0A0MRZ7 120 aa8.13□□□□□ -1.11
TRAF3IP2-211ENST00000528599 TRAV8-3A0A0A6YYJ7 113 aa8.13□□□□□ -1.11
TRAF3IP2-211ENST00000528599 TRAV13-1A0A0B4J241 112 aa8.13□□□□□ -1.11
TRAF3IP2-211ENST00000528599 BATFQ16520 125 aa8.13□□□□□ -1.11
TRAF3IP2-211ENST00000528599 MIAQ16674 131 aa8.13□□□□□ -1.11
TRAF3IP2-211ENST00000528599 PCP2Q8IVA1 136 aa8.13□□□□□ -1.11
TRAF3IP2-211ENST00000528599 E9PLD3 99 aa8.12□□□□□ -1.11
TRAF3IP2-211ENST00000528599 IGLV4-69A0A075B6H9 119 aa8.11□□□□□ -1.11
TRAF3IP2-211ENST00000528599 UBE2D1P51668 147 aa8.11□□□□□ -1.11
TRAF3IP2-211ENST00000528599 HSD52Q0P140 79 aa8.11□□□□□ -1.11
TRAF3IP2-211ENST00000528599 KRTAP26-1Q6PEX3 210 aa8.11□□□□□ -1.11
TRAF3IP2-211ENST00000528599 NFE4Q86UQ8 179 aa8.11□□□□□ -1.11
TRAF3IP2-211ENST00000528599 TP73-AS1Q9UF72 201 aa8.11□□□□□ -1.11
TRAF3IP2-211ENST00000528599 TRAV8-4A0A0B4J246 113 aa8.11□□□□□ -1.11
TRAF3IP2-211ENST00000528599 SEC11AP67812 179 aa8.11□□□□□ -1.11
TRAF3IP2-211ENST00000528599 IGKV2D-24A0A075B6R9 120 aa8.1□□□□□ -1.11
TRAF3IP2-211ENST00000528599 C11orf86A6NJI1 115 aa8.1□□□□□ -1.11
TRAF3IP2-211ENST00000528599 CCL25O15444 150 aa8.1□□□□□ -1.11
TRAF3IP2-211ENST00000528599 SS18Q15532 418 aa8.1□□□□□ -1.11
TRAF3IP2-211ENST00000528599 LINC00242Q5T6M2 205 aa8.1□□□□□ -1.11
TRAF3IP2-211ENST00000528599 Q6ZRN7 208 aaPredicted RBP8.1□□□□□ -1.11
TRAF3IP2-211ENST00000528599 C6orf223Q8N319 242 aa8.1□□□□□ -1.11
TRAF3IP2-211ENST00000528599 CHCHD10Q8WYQ3 142 aaPredicted RBP8.1□□□□□ -1.11
TRAF3IP2-211ENST00000528599 C1orf43Q9BWL3 253 aa8.1□□□□□ -1.11
TRAF3IP2-211ENST00000528599 A0A0J9YXV3 536 aa8.09□□□□□ -1.11
TRAF3IP2-211ENST00000528599 XCL1P47992 114 aa8.09□□□□□ -1.11
TRAF3IP2-211ENST00000528599 C1orf134Q5TEV5 83 aa8.09□□□□□ -1.11
TRAF3IP2-211ENST00000528599 GAGE12HA6NDE8 117 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 COX6A2Q02221 97 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 TAL2Q16559 108 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 FAM19A3Q7Z5A8 133 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 MAPKAPK5-AS1Q8N8E1 139 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 RMI2Q96E14 147 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 HECTD4Q9Y4D8 3996 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 MYMXA0A1B0GTQ4 84 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 HERVK_113P61574 105 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 FOXI1Q12951 378 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 ORAOV1Q8WV07 137 aa8.08□□□□□ -1.12
TRAF3IP2-211ENST00000528599 CD164L2Q6UWJ8 174 aa8.07□□□□□ -1.12
TRAF3IP2-211ENST00000528599 TM2D2Q9BX73 214 aa8.07□□□□□ -1.12
TRAF3IP2-211ENST00000528599 DNAH17Q9UFH2 4485 aa8.06□□□□□ -1.12
TRAF3IP2-211ENST00000528599 IGHV3OR16-9A0A0B4J2B5 98 aa8.06□□□□□ -1.12
TRAF3IP2-211ENST00000528599 CHAC1Q9BUX1 264 aa8.06□□□□□ -1.12
TRAF3IP2-211ENST00000528599 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
TRAF3IP2-211ENST00000528599 COX11Q9Y6N1 276 aa8.06□□□□□ -1.12
TRAF3IP2-211ENST00000528599 PKD1P98161 4303 aa8.06□□□□□ -1.12
TRAF3IP2-211ENST00000528599 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
TRAF3IP2-211ENST00000528599 RTL8CO15255 209 aa8.05□□□□□ -1.12
TRAF3IP2-211ENST00000528599 A6NDN8 102 aa8.05□□□□□ -1.12
TRAF3IP2-211ENST00000528599 TAX1BP3O14907 124 aa8.05□□□□□ -1.12
TRAF3IP2-211ENST00000528599 PSCAO43653 123 aa8.05□□□□□ -1.12
TRAF3IP2-211ENST00000528599 C5orf38Q86SI9 138 aa8.05□□□□□ -1.12
TRAF3IP2-211ENST00000528599 GEMIN7Q9H840 131 aaKnown RBP8.05□□□□□ -1.12
TRAF3IP2-211ENST00000528599 TMEM223A0PJW6 202 aa8.04□□□□□ -1.12
TRAF3IP2-211ENST00000528599 HERVK_113P63121 156 aa8.04□□□□□ -1.12
TRAF3IP2-211ENST00000528599 TMEM170BQ5T4T1 132 aa8.04□□□□□ -1.12
TRAF3IP2-211ENST00000528599 CDKN2A-AS1Q9UH64 79 aa8.04□□□□□ -1.12
TRAF3IP2-211ENST00000528599 PKHD1P08F94 4074 aa8.04□□□□□ -1.12
TRAF3IP2-211ENST00000528599 H3BRM9 83 aa8.03□□□□□ -1.12
TRAF3IP2-211ENST00000528599 COX7A2LO14548 114 aa8.03□□□□□ -1.12
TRAF3IP2-211ENST00000528599 BIRC6Q9NR09 4857 aa8.03□□□□□ -1.12
TRAF3IP2-211ENST00000528599 IGLV5-45A0A087WSX0 123 aa8.02□□□□□ -1.13
TRAF3IP2-211ENST00000528599 A0A087WZ39 114 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms