RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 CSDC2Q9Y534 153 aaKnown RBP12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 A0A0B4J2C4 111 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 A8MZ25 164 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 COX6A2Q02221 97 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 GAGE6Q13070 117 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 CDC42SE2Q9NRR3 84 aa12.13□□□□□ -0.47
PCDHA6-202ENST00000527624 TRBV20-1A0A075B6N2 111 aa12.12□□□□□ -0.47
PCDHA6-202ENST00000527624 J3QR89 54 aa12.12□□□□□ -0.47
PCDHA6-202ENST00000527624 SMCPP49901 116 aaPredicted RBP12.12□□□□□ -0.47
PCDHA6-202ENST00000527624 KRTAP10-11P60412 298 aa12.12□□□□□ -0.47
PCDHA6-202ENST00000527624 PRIMA1Q86XR5 153 aa12.12□□□□□ -0.47
PCDHA6-202ENST00000527624 TRBV6-8A0A0A6YYG3 113 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 TCL1BO95988 128 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 IGHV3-33P01772 117 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 TIRAPP58753 221 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 Q8NAQ8 132 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 IGLV5-45A0A087WSX0 123 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 LINC00242Q5T6M2 205 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 TMEM101Q96IK0 257 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 CELA1Q9UNI1 258 aa12.11□□□□□ -0.47
PCDHA6-202ENST00000527624 CHCHD5Q9BSY4 110 aa12.1□□□□□ -0.47
PCDHA6-202ENST00000527624 PRO0255Q9UI72 69 aa12.1□□□□□ -0.47
PCDHA6-202ENST00000527624 A0A096LPF7 62 aa12.1□□□□□ -0.47
PCDHA6-202ENST00000527624 ZFAND6Q6FIF0 208 aa12.1□□□□□ -0.47
PCDHA6-202ENST00000527624 RNF183Q96D59 192 aa12.1□□□□□ -0.47
PCDHA6-202ENST00000527624 MIFP14174 115 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 SMAGPQ0VAQ4 97 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 SPANXDQ9BXN6 97 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 SPANXCQ9NY87 97 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 ERG28Q9UKR5 140 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 PKD1L1Q8TDX9 2849 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 DAD1P61803 113 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 SHISA2Q6UWI4 295 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 ATP6V0E2Q8NHE4 81 aa12.09□□□□□ -0.47
PCDHA6-202ENST00000527624 PRSS2P07478 247 aa12.08□□□□□ -0.48
PCDHA6-202ENST00000527624 PAX4O43316 350 aa12.07□□□□□ -0.48
PCDHA6-202ENST00000527624 HERVK_113P63121 156 aa12.07□□□□□ -0.48
PCDHA6-202ENST00000527624 IGLV4-60A0A075B6I1 120 aa12.07□□□□□ -0.48
PCDHA6-202ENST00000527624 H7C423 109 aa12.07□□□□□ -0.48
PCDHA6-202ENST00000527624 IGKV3OR2-268A0A0C4DH90 116 aa12.06□□□□□ -0.48
PCDHA6-202ENST00000527624 MIAQ16674 131 aa12.06□□□□□ -0.48
PCDHA6-202ENST00000527624 H7C2G1 150 aa12.06□□□□□ -0.48
PCDHA6-202ENST00000527624 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
PCDHA6-202ENST00000527624 TIMM17BO60830 172 aa12.05□□□□□ -0.48
PCDHA6-202ENST00000527624 FOXI1Q12951 378 aa12.05□□□□□ -0.48
PCDHA6-202ENST00000527624 COL6A5A8TX70 2615 aa12.04□□□□□ -0.48
PCDHA6-202ENST00000527624 NDUFA1O15239 70 aa12.04□□□□□ -0.48
PCDHA6-202ENST00000527624 HTN3P15516 51 aa12.04□□□□□ -0.48
PCDHA6-202ENST00000527624 SVIPQ8NHG7 77 aa12.04□□□□□ -0.48
PCDHA6-202ENST00000527624 RETNQ9HD89 108 aa12.04□□□□□ -0.48
PCDHA6-202ENST00000527624 IGLV5-39A0A0G2JS06 123 aa12.03□□□□□ -0.48
PCDHA6-202ENST00000527624 GAGE12HA6NDE8 117 aa12.03□□□□□ -0.48
PCDHA6-202ENST00000527624 SPART-AS1P0CW21 52 aa12.03□□□□□ -0.48
PCDHA6-202ENST00000527624 ATP5G1P05496 136 aa12.03□□□□□ -0.48
PCDHA6-202ENST00000527624 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.48
PCDHA6-202ENST00000527624 F5H768 121 aa12.02□□□□□ -0.48
PCDHA6-202ENST00000527624 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.48
PCDHA6-202ENST00000527624 Q1RN00 199 aa12.02□□□□□ -0.48
PCDHA6-202ENST00000527624 SMIM1B2RUZ4 78 aa12.02□□□□□ -0.49
PCDHA6-202ENST00000527624 SPATA25Q9BR10 227 aa12.02□□□□□ -0.49
PCDHA6-202ENST00000527624 TMEM262E9PQX1 116 aa12.01□□□□□ -0.49
PCDHA6-202ENST00000527624 TEN1Q86WV5 123 aa12.01□□□□□ -0.49
PCDHA6-202ENST00000527624 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
PCDHA6-202ENST00000527624 IFITM1P13164 125 aa12□□□□□ -0.49
PCDHA6-202ENST00000527624 NPC2P61916 151 aa12□□□□□ -0.49
PCDHA6-202ENST00000527624 SIGMAR1Q99720 223 aa11.99□□□□□ -0.49
PCDHA6-202ENST00000527624 Q9H8V8 135 aa11.99□□□□□ -0.49
PCDHA6-202ENST00000527624 TRIAP1O43715 76 aa11.98□□□□□ -0.49
PCDHA6-202ENST00000527624 CIRBPQ14011 172 aaKnown RBP11.98□□□□□ -0.49
PCDHA6-202ENST00000527624 PPDPFLQ8WWR9 84 aa11.98□□□□□ -0.49
PCDHA6-202ENST00000527624 DAND5Q8N907 189 aa11.98□□□□□ -0.49
PCDHA6-202ENST00000527624 CARD19Q96LW7 228 aa11.98□□□□□ -0.49
PCDHA6-202ENST00000527624 C9JAW5 83 aa11.97□□□□□ -0.49
PCDHA6-202ENST00000527624 SLC25A20O43772 301 aa11.97□□□□□ -0.49
PCDHA6-202ENST00000527624 ZNF625Q96I27 306 aaPredicted RBP11.97□□□□□ -0.49
PCDHA6-202ENST00000527624 M0QXV9 152 aa11.96□□□□□ -0.49
PCDHA6-202ENST00000527624 ATXN8Q156A1 80 aa11.96□□□□□ -0.49
PCDHA6-202ENST00000527624 NOTCH1P46531 2555 aa11.96□□□□□ -0.49
PCDHA6-202ENST00000527624 CLPSL2Q6UWE3 100 aa11.96□□□□□ -0.49
PCDHA6-202ENST00000527624 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.49
PCDHA6-202ENST00000527624 CMYA5Q8N3K9 4069 aa11.96□□□□□ -0.5
PCDHA6-202ENST00000527624 ANKRD29Q8N6D5 301 aa11.95□□□□□ -0.5
PCDHA6-202ENST00000527624 ANK2Q01484 3957 aa11.95□□□□□ -0.5
PCDHA6-202ENST00000527624 Q8N3U1 123 aa11.94□□□□□ -0.5
PCDHA6-202ENST00000527624 LINC00959A0A1B0GUT2 108 aa11.94□□□□□ -0.5
PCDHA6-202ENST00000527624 LINC01620Q4KN68 170 aa11.94□□□□□ -0.5
PCDHA6-202ENST00000527624 LINC00308Q8TCZ7 52 aa11.94□□□□□ -0.5
PCDHA6-202ENST00000527624 A0A1B0GUV1 79 aa11.93□□□□□ -0.5
PCDHA6-202ENST00000527624 A0A0U1RRA0 63 aa11.92□□□□□ -0.5
PCDHA6-202ENST00000527624 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
PCDHA6-202ENST00000527624 MRPL23Q16540 153 aaKnown RBP11.92□□□□□ -0.5
PCDHA6-202ENST00000527624 PRB2P02812 416 aaPredicted RBP11.91□□□□□ -0.5
PCDHA6-202ENST00000527624 COX6CP09669 75 aa11.91□□□□□ -0.5
PCDHA6-202ENST00000527624 C5orf38Q86SI9 138 aa11.91□□□□□ -0.5
PCDHA6-202ENST00000527624 TOMM7Q9P0U1 55 aa11.91□□□□□ -0.5
PCDHA6-202ENST00000527624 RPL13AP40429 203 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms