RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 C6orf99Q4VX62 202 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 Q6ZQT0 140 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 C20orf203Q8NBC4 194 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 Q8TAT8 98 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 ZCCHC13Q8WW36 166 aaKnown RBP2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 Q9BRP9 147 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 ARRDC1-AS1Q9H2J1 176 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 LINC00574Q9H8X3 128 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 SDK2Q58EX2 2172 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 DNAJC13O75165 2243 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 SEC16AO15027 2179 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 IGHV1OR15-1A0A075B7D0 117 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 IGHV6-1A0A0B4J1U7 121 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 A6NED7 52 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 H3BQ85 93 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 I3L2K1 104 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 LECT2O14960 151 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 ZNHIT1O43257 154 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 IGHV3-48P01763 117 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 MGPP08493 103 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 LINC00315P59091 139 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 KRTAP12-2P59991 146 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 C17orf58Q2M2W7 97 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 C9orf66Q5T8R8 295 aa2.5□□□□□ -2.01
CLNS1A-209ENST00000527299 F5P12259 2224 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 A0A0C4DFX4 3053 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 MUC4Q99102 2169 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 IGHV3-15A0A0B4J1V0 119 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 NDUFB1O75438 58 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 IGLV2-23P01705 113 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 RPL27AP46776 148 aaKnown RBP2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 B3GALT5-AS1P59052 145 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 LMO4P61968 165 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 RPS21P63220 83 aaKnown RBP2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 HAMPP81172 84 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 DEFB114Q30KQ6 69 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 SCXQ7RTU7 201 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 SMIM11BQ8TCY0 68 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 PRR15LQ9BU68 103 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 HIGD2AQ9BW72 106 aa2.49□□□□□ -2.01
CLNS1A-209ENST00000527299 CNTRLQ7Z7A1 2325 aa2.48□□□□□ -2.01
CLNS1A-209ENST00000527299 BRWD1Q9NSI6 2320 aa2.48□□□□□ -2.01
CLNS1A-209ENST00000527299 IGHV3-38A0A0C4DH36 116 aa2.48□□□□□ -2.01
CLNS1A-209ENST00000527299 LRCOL1A6NCL2 159 aa2.48□□□□□ -2.01
CLNS1A-209ENST00000527299 LY6G6DO95868 133 aa2.48□□□□□ -2.01
CLNS1A-209ENST00000527299 C10orf55Q5SWW7 151 aa2.48□□□□□ -2.01
CLNS1A-209ENST00000527299 FAM74A4Q5TZK3 123 aa2.48□□□□□ -2.01
CLNS1A-209ENST00000527299 CASC2Q6XLA1 102 aa2.48□□□□□ -2.01
CLNS1A-209ENST00000527299 ZNF706Q9Y5V0 76 aaPredicted RBP2.48□□□□□ -2.01
CLNS1A-209ENST00000527299 ZFHX3Q15911 3703 aa2.48□□□□□ -2.01
CLNS1A-209ENST00000527299 IGHV4-31P0DP07 118 aa2.47□□□□□ -2.01
CLNS1A-209ENST00000527299 Q6ZTI0 123 aa2.47□□□□□ -2.01
CLNS1A-209ENST00000527299 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
CLNS1A-209ENST00000527299 ZNRF1Q8ND25 227 aa2.47□□□□□ -2.01
CLNS1A-209ENST00000527299 LEAP2Q969E1 77 aa2.47□□□□□ -2.01
CLNS1A-209ENST00000527299 FAM104AQ969W3 186 aa2.47□□□□□ -2.01
CLNS1A-209ENST00000527299 KLK9Q9UKQ9 250 aa2.47□□□□□ -2.01
CLNS1A-209ENST00000527299 CELA1Q9UNI1 258 aa2.47□□□□□ -2.01
CLNS1A-209ENST00000527299 PTPRQQ9UMZ3 2332 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 IGKV2-28A0A075B6P5 120 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 A0A1B0GW54 56 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 SRRM5B3KS81 715 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 K7EIM0 57 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 IGKV2D-28P01615 120 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 IGKV4-1P06312 121 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 IGHV4-30-4P0DP06 118 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 RNASE13Q5GAN3 156 aaKnown RBP2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 NTM-AS1Q6ZSK4 140 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 Q8N814 137 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 FDCSPQ8NFU4 85 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 B9D2Q9BPU9 175 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 SND1-IT1Q9HBX3 110 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 PLAC8Q9NZF1 115 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 CCL26Q9Y258 94 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 S4R3C0 116 aa2.46□□□□□ -2.02
CLNS1A-209ENST00000527299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 IGHV3-49A0A0A0MS15 119 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 IGHV3-21A0A0B4J1V1 117 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 PINLYPA6NC86 204 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 M0QY20 66 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 MRPL33O75394 65 aaKnown RBP2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 IGLV1-51P01701 117 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 PRB4P10163 310 aaPredicted RBP2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 RNASE3P12724 160 aaKnown RBP2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 SEC61BP60468 96 aaKnown RBP2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 ZNF843Q8N446 348 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 PRAC1Q96KF2 57 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 LINC00208Q96KT6 92 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 RETNLBQ9BQ08 111 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 ZNF702PQ9H963 129 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 CDKN2A-AS1Q9UH64 79 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 LINC01558Q9Y6Z2 57 aa2.45□□□□□ -2.02
CLNS1A-209ENST00000527299 KIAA0100Q14667 2235 aaKnown RBP2.44□□□□□ -2.02
CLNS1A-209ENST00000527299 IGHV3-73A0A0B4J1V6 119 aa2.44□□□□□ -2.02
CLNS1A-209ENST00000527299 IGHV3-16A0A0C4DH30 117 aa2.44□□□□□ -2.02
CLNS1A-209ENST00000527299 TRBV6-4A0A1B0GX49 114 aa2.44□□□□□ -2.02
CLNS1A-209ENST00000527299 SMIM1B2RUZ4 78 aa2.44□□□□□ -2.02
CLNS1A-209ENST00000527299 TFF1P04155 84 aa2.44□□□□□ -2.02
CLNS1A-209ENST00000527299 DSCR10P59022 87 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms