RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 HIST1H4GQ99525 98 aa12.97□□□□□ -0.33
SMPD1-203ENST00000527275 CHCHD5Q9BSY4 110 aa12.97□□□□□ -0.33
SMPD1-203ENST00000527275 TM2D2Q9BX73 214 aa12.97□□□□□ -0.33
SMPD1-203ENST00000527275 CSMD3Q7Z407 3707 aa12.96□□□□□ -0.33
SMPD1-203ENST00000527275 IGLL5B9A064 214 aa12.96□□□□□ -0.34
SMPD1-203ENST00000527275 FXYD2P54710 66 aa12.96□□□□□ -0.34
SMPD1-203ENST00000527275 TRAV13-1A0A0B4J241 112 aa12.95□□□□□ -0.34
SMPD1-203ENST00000527275 IGHV3-30-3P0DP02 117 aa12.95□□□□□ -0.34
SMPD1-203ENST00000527275 LINC00242Q5T6M2 205 aa12.95□□□□□ -0.34
SMPD1-203ENST00000527275 FAM19A3Q7Z5A8 133 aa12.95□□□□□ -0.34
SMPD1-203ENST00000527275 TRAV8-3A0A0A6YYJ7 113 aa12.94□□□□□ -0.34
SMPD1-203ENST00000527275 IGHV1-58A0A0C4DH39 117 aa12.94□□□□□ -0.34
SMPD1-203ENST00000527275 K7EP13 123 aa12.94□□□□□ -0.34
SMPD1-203ENST00000527275 COX6A2Q02221 97 aa12.94□□□□□ -0.34
SMPD1-203ENST00000527275 CDKN2A-AS1Q9UH64 79 aa12.94□□□□□ -0.34
SMPD1-203ENST00000527275 IGLV5-45A0A087WSX0 123 aa12.94□□□□□ -0.34
SMPD1-203ENST00000527275 HERVK_113P63121 156 aa12.94□□□□□ -0.34
SMPD1-203ENST00000527275 SPINK8P0C7L1 97 aa12.93□□□□□ -0.34
SMPD1-203ENST00000527275 H3BRM9 83 aa12.93□□□□□ -0.34
SMPD1-203ENST00000527275 VAMP3Q15836 100 aa12.93□□□□□ -0.34
SMPD1-203ENST00000527275 SH2D6Q7Z4S9 175 aa12.92□□□□□ -0.34
SMPD1-203ENST00000527275 IGLV4-60A0A075B6I1 120 aa12.91□□□□□ -0.34
SMPD1-203ENST00000527275 SRSF9Q13242 221 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMPD1-203ENST00000527275 DNAH7Q8WXX0 4024 aa12.91□□□□□ -0.34
SMPD1-203ENST00000527275 SMIM13P0DJ93 91 aa12.9□□□□□ -0.34
SMPD1-203ENST00000527275 C15orf53Q8NAA6 179 aa12.9□□□□□ -0.34
SMPD1-203ENST00000527275 LYPD5Q6UWN5 251 aa12.89□□□□□ -0.35
SMPD1-203ENST00000527275 NUPR2A6NF83 97 aa12.88□□□□□ -0.35
SMPD1-203ENST00000527275 TMEM262E9PQX1 116 aa12.88□□□□□ -0.35
SMPD1-203ENST00000527275 RAB37Q96AX2 223 aa12.88□□□□□ -0.35
SMPD1-203ENST00000527275 SPANXB1Q9NS25 103 aaPredicted RBP12.88□□□□□ -0.35
SMPD1-203ENST00000527275 NHP2Q9NX24 153 aaKnown RBP12.88□□□□□ -0.35
SMPD1-203ENST00000527275 TENM2Q9NT68 2774 aa12.87□□□□□ -0.35
SMPD1-203ENST00000527275 ESRGQ1W209 222 aa12.87□□□□□ -0.35
SMPD1-203ENST00000527275 C10orf126Q8N4M7 172 aa12.87□□□□□ -0.35
SMPD1-203ENST00000527275 IGKV3OR2-268A0A0C4DH90 116 aa12.86□□□□□ -0.35
SMPD1-203ENST00000527275 NDUFA12Q9UI09 145 aa12.86□□□□□ -0.35
SMPD1-203ENST00000527275 A0A1B0GUV1 79 aa12.86□□□□□ -0.35
SMPD1-203ENST00000527275 C9orf118A6NHY6 69 aa12.86□□□□□ -0.35
SMPD1-203ENST00000527275 ZFAND6Q6FIF0 208 aa12.86□□□□□ -0.35
SMPD1-203ENST00000527275 WWC2-AS2Q96NR7 200 aa12.86□□□□□ -0.35
SMPD1-203ENST00000527275 A0A0J9YXY3 114 aa12.85□□□□□ -0.35
SMPD1-203ENST00000527275 RBX1P62877 108 aa12.85□□□□□ -0.35
SMPD1-203ENST00000527275 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
SMPD1-203ENST00000527275 STARD9Q9P2P6 4700 aa12.85□□□□□ -0.35
SMPD1-203ENST00000527275 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
SMPD1-203ENST00000527275 K7ERJ3 54 aa12.84□□□□□ -0.35
SMPD1-203ENST00000527275 MUC7Q8TAX7 377 aa12.84□□□□□ -0.35
SMPD1-203ENST00000527275 LELP1Q5T871 98 aa12.84□□□□□ -0.35
SMPD1-203ENST00000527275 DYNC2H1Q8NCM8 4307 aaKnown RBP12.83□□□□□ -0.36
SMPD1-203ENST00000527275 SMIM1B2RUZ4 78 aa12.83□□□□□ -0.36
SMPD1-203ENST00000527275 IGHV3-30P01768 117 aa12.83□□□□□ -0.36
SMPD1-203ENST00000527275 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.36
SMPD1-203ENST00000527275 APLNQ9ULZ1 77 aa12.83□□□□□ -0.36
SMPD1-203ENST00000527275 H3BUT2 72 aa12.82□□□□□ -0.36
SMPD1-203ENST00000527275 LYSTQ99698 3801 aa12.82□□□□□ -0.36
SMPD1-203ENST00000527275 TMEM238LA0A1B0GVL6 79 aa12.81□□□□□ -0.36
SMPD1-203ENST00000527275 A6NJY4 79 aa12.81□□□□□ -0.36
SMPD1-203ENST00000527275 TMEM238C9JI98 176 aa12.81□□□□□ -0.36
SMPD1-203ENST00000527275 NAA38Q9BRA0 125 aaKnown RBP12.81□□□□□ -0.36
SMPD1-203ENST00000527275 PLECQ15149 4684 aaKnown RBP12.8□□□□□ -0.36
SMPD1-203ENST00000527275 LINC00959A0A1B0GUT2 108 aa12.8□□□□□ -0.36
SMPD1-203ENST00000527275 A0A1B0GWB2 263 aa12.8□□□□□ -0.36
SMPD1-203ENST00000527275 NDUFA1O15239 70 aa12.79□□□□□ -0.36
SMPD1-203ENST00000527275 CCL18P55774 89 aa12.79□□□□□ -0.36
SMPD1-203ENST00000527275 LINC00588Q9Y4M8 146 aa12.79□□□□□ -0.36
SMPD1-203ENST00000527275 IGHV3OR16-9A0A0B4J2B5 98 aa12.78□□□□□ -0.36
SMPD1-203ENST00000527275 WFDC10BQ8IUB3 73 aa12.78□□□□□ -0.36
SMPD1-203ENST00000527275 Q8N3U1 123 aa12.78□□□□□ -0.36
SMPD1-203ENST00000527275 LITAFQ99732 161 aa12.78□□□□□ -0.36
SMPD1-203ENST00000527275 MUSTN1Q8IVN3 82 aa12.77□□□□□ -0.37
SMPD1-203ENST00000527275 SS18Q15532 418 aa12.76□□□□□ -0.37
SMPD1-203ENST00000527275 Q9H8V8 135 aa12.76□□□□□ -0.37
SMPD1-203ENST00000527275 A0A1W2PPM0 123 aa12.76□□□□□ -0.37
SMPD1-203ENST00000527275 CBY1Q9Y3M2 126 aa12.76□□□□□ -0.37
SMPD1-203ENST00000527275 ADAMTSL4-AS1Q5T5F5 129 aa12.75□□□□□ -0.37
SMPD1-203ENST00000527275 CLPSL2Q6UWE3 100 aa12.75□□□□□ -0.37
SMPD1-203ENST00000527275 LINC00269Q8N2A0 174 aa12.75□□□□□ -0.37
SMPD1-203ENST00000527275 A0A087WZ39 114 aa12.74□□□□□ -0.37
SMPD1-203ENST00000527275 TIMM17BO60830 172 aa12.74□□□□□ -0.37
SMPD1-203ENST00000527275 APOMO95445 188 aa12.74□□□□□ -0.37
SMPD1-203ENST00000527275 ANGP03950 147 aaKnown RBP12.74□□□□□ -0.37
SMPD1-203ENST00000527275 C5orf38Q86SI9 138 aa12.74□□□□□ -0.37
SMPD1-203ENST00000527275 SPANXDQ9BXN6 97 aa12.74□□□□□ -0.37
SMPD1-203ENST00000527275 SPANXCQ9NY87 97 aa12.74□□□□□ -0.37
SMPD1-203ENST00000527275 GAGE10A6NGK3 116 aa12.73□□□□□ -0.37
SMPD1-203ENST00000527275 PRSS2P07478 247 aa12.73□□□□□ -0.37
SMPD1-203ENST00000527275 RPL24P83731 157 aaKnown RBP12.73□□□□□ -0.37
SMPD1-203ENST00000527275 XCL1P47992 114 aa12.73□□□□□ -0.37
SMPD1-203ENST00000527275 CASC10Q5T4H9 136 aa12.73□□□□□ -0.37
SMPD1-203ENST00000527275 A4D1N5 150 aa12.72□□□□□ -0.37
SMPD1-203ENST00000527275 CFC1BP0CG36 223 aa12.72□□□□□ -0.37
SMPD1-203ENST00000527275 CFC1P0CG37 223 aa12.72□□□□□ -0.37
SMPD1-203ENST00000527275 FABP2P12104 132 aa12.72□□□□□ -0.37
SMPD1-203ENST00000527275 CIRBPQ14011 172 aaKnown RBP12.72□□□□□ -0.37
SMPD1-203ENST00000527275 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
SMPD1-203ENST00000527275 ZNF625Q96I27 306 aaPredicted RBP12.72□□□□□ -0.37
SMPD1-203ENST00000527275 MIAQ16674 131 aa12.71□□□□□ -0.37
SMPD1-203ENST00000527275 IGHV3-33P01772 117 aa12.71□□□□□ -0.37
SMPD1-203ENST00000527275 REG3AQ06141 175 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms