RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 Q6JHZ5 121 aa1.57□□□□□ -2.16
USP47-206ENST00000525367 LINC00846Q9NV44 126 aa1.57□□□□□ -2.16
USP47-206ENST00000525367 COL4A6Q14031 1691 aa1.57□□□□□ -2.16
USP47-206ENST00000525367 ARMS2P0C7Q2 107 aa1.56□□□□□ -2.16
USP47-206ENST00000525367 ARHGAP35Q9NRY4 1499 aa1.56□□□□□ -2.16
USP47-206ENST00000525367 ZDBF2Q9HCK1 2354 aa1.55□□□□□ -2.16
USP47-206ENST00000525367 F8WEM9 126 aa1.55□□□□□ -2.16
USP47-206ENST00000525367 ALKAL2Q6UX46 152 aa1.55□□□□□ -2.16
USP47-206ENST00000525367 IQSEC2Q5JU85 1478 aa1.55□□□□□ -2.16
USP47-206ENST00000525367 NRXN1Q9ULB1 1477 aa1.55□□□□□ -2.16
USP47-206ENST00000525367 F5P12259 2224 aa1.54□□□□□ -2.16
USP47-206ENST00000525367 COL6A6A6NMZ7 2263 aa1.54□□□□□ -2.16
USP47-206ENST00000525367 MUC6Q6W4X9 2439 aa1.54□□□□□ -2.16
USP47-206ENST00000525367 SNRPFP62306 86 aaKnown RBP1.54□□□□□ -2.16
USP47-206ENST00000525367 TDRG1Q3Y452 100 aa1.54□□□□□ -2.16
USP47-206ENST00000525367 RAPGEF6Q8TEU7 1601 aa1.54□□□□□ -2.16
USP47-206ENST00000525367 CLTCQ00610 1675 aaKnown RBP1.54□□□□□ -2.16
USP47-206ENST00000525367 LRRC37A2A6NM11 1700 aa1.54□□□□□ -2.16
USP47-206ENST00000525367 SBF2Q86WG5 1849 aa1.54□□□□□ -2.16
USP47-206ENST00000525367 A0A087WVE0 104 aa1.53□□□□□ -2.16
USP47-206ENST00000525367 H3BQF6 201 aa1.53□□□□□ -2.16
USP47-206ENST00000525367 LEPROTL1O95214 131 aa1.53□□□□□ -2.16
USP47-206ENST00000525367 KNTC1P50748 2209 aa1.53□□□□□ -2.16
USP47-206ENST00000525367 MON2Q7Z3U7 1717 aa1.53□□□□□ -2.16
USP47-206ENST00000525367 FDCSPQ8NFU4 85 aa1.53□□□□□ -2.16
USP47-206ENST00000525367 PSENENQ9NZ42 101 aa1.53□□□□□ -2.16
USP47-206ENST00000525367 CRCT1Q9UGL9 99 aa1.53□□□□□ -2.16
USP47-206ENST00000525367 SPCS1Q9Y6A9 102 aa1.53□□□□□ -2.16
USP47-206ENST00000525367 ROS1P08922 2347 aa1.52□□□□□ -2.17
USP47-206ENST00000525367 LAMA4Q16363 1823 aa1.52□□□□□ -2.17
USP47-206ENST00000525367 KANTRA0A1W2PQU2 76 aa1.52□□□□□ -2.17
USP47-206ENST00000525367 D6R8Y8 96 aa1.52□□□□□ -2.17
USP47-206ENST00000525367 HMGN2P05204 90 aaKnown RBP1.52□□□□□ -2.17
USP47-206ENST00000525367 ADIRFQ15847 76 aa1.52□□□□□ -2.17
USP47-206ENST00000525367 C10orf113Q5VZT2 155 aa1.52□□□□□ -2.17
USP47-206ENST00000525367 MUSTN1Q8IVN3 82 aa1.52□□□□□ -2.17
USP47-206ENST00000525367 ZNF236Q9UL36 1845 aa1.52□□□□□ -2.17
USP47-206ENST00000525367 NLRP1Q9C000 1473 aa1.51□□□□□ -2.17
USP47-206ENST00000525367 KRTAP4-1Q9BYQ7 146 aa1.51□□□□□ -2.17
USP47-206ENST00000525367 TRBV6-1A0A0K0K1D8 114 aa1.5□□□□□ -2.17
USP47-206ENST00000525367 ACYP1P07311 99 aa1.5□□□□□ -2.17
USP47-206ENST00000525367 NMSQ5H8A3 153 aa1.5□□□□□ -2.17
USP47-206ENST00000525367 C10orf95Q9H7T3 257 aa1.5□□□□□ -2.17
USP47-206ENST00000525367 ST20Q9HBF5 79 aa1.5□□□□□ -2.17
USP47-206ENST00000525367 MAGI2Q86UL8 1455 aa1.5□□□□□ -2.17
USP47-206ENST00000525367 A0A0D9SG42 100 aa1.49□□□□□ -2.17
USP47-206ENST00000525367 SSBP3-AS1Q7Z2R9 100 aa1.49□□□□□ -2.17
USP47-206ENST00000525367 POLA1P09884 1462 aaPredicted RBP1.49□□□□□ -2.17
USP47-206ENST00000525367 GNGT1P63211 74 aa1.48□□□□□ -2.17
USP47-206ENST00000525367 LINC00643Q86TS7 51 aa1.48□□□□□ -2.17
USP47-206ENST00000525367 SCN7AQ01118 1682 aa1.48□□□□□ -2.17
USP47-206ENST00000525367 H0Y9P7 68 aa1.47□□□□□ -2.17
USP47-206ENST00000525367 SPATA8Q6RVD6 105 aa1.47□□□□□ -2.17
USP47-206ENST00000525367 DEFB107AQ8IZN7 70 aa1.47□□□□□ -2.17
USP47-206ENST00000525367 LINC01600Q96MT4 127 aa1.47□□□□□ -2.17
USP47-206ENST00000525367 PDCD11Q14690 1871 aaKnown RBP1.46□□□□□ -2.18
USP47-206ENST00000525367 A0A0D9SFI3 127 aa1.46□□□□□ -2.18
USP47-206ENST00000525367 WFDC2Q14508 124 aa1.46□□□□□ -2.18
USP47-206ENST00000525367 OTOGLQ3ZCN5 2332 aa1.45□□□□□ -2.18
USP47-206ENST00000525367 ERVK-7P63135 1459 aa1.45□□□□□ -2.18
USP47-206ENST00000525367 C1orf167Q5SNV9 1468 aa1.45□□□□□ -2.18
USP47-206ENST00000525367 MYO3AQ8NEV4 1616 aa1.45□□□□□ -2.18
USP47-206ENST00000525367 RGPD4Q7Z3J3 1758 aa1.45□□□□□ -2.18
USP47-206ENST00000525367 ERCC6L2Q5T890 1561 aa1.45□□□□□ -2.18
USP47-206ENST00000525367 RRBP1Q9P2E9 1410 aaKnown RBP1.44□□□□□ -2.18
USP47-206ENST00000525367 MYMXA0A1B0GTQ4 84 aa1.44□□□□□ -2.18
USP47-206ENST00000525367 IQCF6A8MYZ5 107 aa1.44□□□□□ -2.18
USP47-206ENST00000525367 BTAF1O14981 1849 aa1.43□□□□□ -2.18
USP47-206ENST00000525367 CUX1P39880 1505 aa1.43□□□□□ -2.18
USP47-206ENST00000525367 NEXMIFQ5QGS0 1516 aa1.43□□□□□ -2.18
USP47-206ENST00000525367 KIF14Q15058 1648 aa1.43□□□□□ -2.18
USP47-206ENST00000525367 MYO7AQ13402 2215 aa1.43□□□□□ -2.18
USP47-206ENST00000525367 COX6A2Q02221 97 aa1.42□□□□□ -2.18
USP47-206ENST00000525367 PLGLAQ15195 96 aa1.42□□□□□ -2.18
USP47-206ENST00000525367 C6orf201Q7Z4U5 140 aa1.42□□□□□ -2.18
USP47-206ENST00000525367 FAM103A1Q9BTL3 118 aaKnown RBP1.42□□□□□ -2.18
USP47-206ENST00000525367 PPLO60437 1756 aa1.42□□□□□ -2.18
USP47-206ENST00000525367 LRP6O75581 1613 aa1.41□□□□□ -2.18
USP47-206ENST00000525367 SPINK7P58062 85 aa1.41□□□□□ -2.18
USP47-206ENST00000525367 PLAC8Q9NZF1 115 aa1.41□□□□□ -2.18
USP47-206ENST00000525367 HELZ2Q9BYK8 2649 aaKnown RBP1.41□□□□□ -2.18
USP47-206ENST00000525367 RGPD3A6NKT7 1758 aaPredicted RBP1.41□□□□□ -2.18
USP47-206ENST00000525367 MAP3K4Q9Y6R4 1608 aa1.4□□□□□ -2.18
USP47-206ENST00000525367 MYO7BQ6PIF6 2116 aa1.4□□□□□ -2.18
USP47-206ENST00000525367 A0A1B0GU69 56 aa1.4□□□□□ -2.19
USP47-206ENST00000525367 CEBPZOSA8MTT3 80 aa1.4□□□□□ -2.19
USP47-206ENST00000525367 CNFNQ9BYD5 112 aa1.4□□□□□ -2.19
USP47-206ENST00000525367 UBE2D4Q9Y2X8 147 aa1.4□□□□□ -2.19
USP47-206ENST00000525367 NUP188Q5SRE5 1749 aa1.4□□□□□ -2.19
USP47-206ENST00000525367 KDM5DQ9BY66 1539 aa1.4□□□□□ -2.19
USP47-206ENST00000525367 JMJD1CQ15652 2540 aa1.39□□□□□ -2.19
USP47-206ENST00000525367 DCAF1Q9Y4B6 1507 aa1.39□□□□□ -2.19
USP47-206ENST00000525367 CADP27708 2225 aa1.39□□□□□ -2.19
USP47-206ENST00000525367 SUPT6HQ7KZ85 1726 aaKnown RBP1.38□□□□□ -2.19
USP47-206ENST00000525367 TRBV7-4A0A0J9YYF1 115 aa1.38□□□□□ -2.19
USP47-206ENST00000525367 IGLC3P0DOY3 106 aa1.38□□□□□ -2.19
USP47-206ENST00000525367 KDM3BQ7LBC6 1761 aa1.38□□□□□ -2.19
USP47-206ENST00000525367 NAV3Q8IVL0 2385 aa1.37□□□□□ -2.19
USP47-206ENST00000525367 H3BUT2 72 aa1.37□□□□□ -2.19
USP47-206ENST00000525367 BVES-AS1Q5T3Y7 98 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms