RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 C2CD3Q4AC94 2353 aa2.68□□□□□ -1.98
CD44-213ENST00000525209 SMG1Q96Q15 3661 aaKnown RBP2.67□□□□□ -1.98
CD44-213ENST00000525209 MYO9AB2RTY4 2548 aa2.67□□□□□ -1.98
CD44-213ENST00000525209 CRYM-AS1A6NIL9 109 aa2.67□□□□□ -1.98
CD44-213ENST00000525209 SYS1-DBNDD2H3BUS1 97 aa2.67□□□□□ -1.98
CD44-213ENST00000525209 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.67□□□□□ -1.98
CD44-213ENST00000525209 ZNF833PQ6ZTB9 187 aa2.67□□□□□ -1.98
CD44-213ENST00000525209 C9orf163Q8N9P6 203 aa2.67□□□□□ -1.98
CD44-213ENST00000525209 ZNF431Q8TF32 576 aaPredicted RBP2.67□□□□□ -1.98
CD44-213ENST00000525209 CYSTM1Q9H1C7 97 aa2.67□□□□□ -1.98
CD44-213ENST00000525209 PSORS1C2Q9UIG4 136 aa2.67□□□□□ -1.98
CD44-213ENST00000525209 R4GN34 69 aa2.67□□□□□ -1.98
CD44-213ENST00000525209 ARHGAP32A7KAX9 2087 aa2.67□□□□□ -1.98
CD44-213ENST00000525209 NOTCH2Q04721 2471 aa2.66□□□□□ -1.98
CD44-213ENST00000525209 CXorf51AA0A1B0GTR3 108 aa2.66□□□□□ -1.98
CD44-213ENST00000525209 HCG22E2RYF7 251 aa2.66□□□□□ -1.98
CD44-213ENST00000525209 IGLV3-19P01714 112 aa2.66□□□□□ -1.98
CD44-213ENST00000525209 PRB4P10163 310 aaPredicted RBP2.66□□□□□ -1.98
CD44-213ENST00000525209 MDKP21741 143 aaPredicted RBP2.66□□□□□ -1.98
CD44-213ENST00000525209 ERHP84090 104 aaKnown RBP2.66□□□□□ -1.98
CD44-213ENST00000525209 SPTSSBQ8NFR3 76 aa2.66□□□□□ -1.98
CD44-213ENST00000525209 Q9BRP9 147 aa2.66□□□□□ -1.98
CD44-213ENST00000525209 CDC42SE1Q9NRR8 79 aa2.66□□□□□ -1.98
CD44-213ENST00000525209 UNC79Q9P2D8 2635 aa2.66□□□□□ -1.98
CD44-213ENST00000525209 TEX15Q9BXT5 2789 aa2.66□□□□□ -1.98
CD44-213ENST00000525209 RTTNQ86VV8 2226 aa2.65□□□□□ -1.98
CD44-213ENST00000525209 SPTY2D1-AS1A0A0U1RR47 76 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 MUC21A0A140T8X8 626 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 A0A1W2PNU3 283 aaPredicted RBP2.65□□□□□ -1.99
CD44-213ENST00000525209 HOXB6P17509 224 aaKnown RBP2.65□□□□□ -1.99
CD44-213ENST00000525209 WFDC2Q14508 124 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 NMSQ5H8A3 153 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 LYPD5Q6UWN5 251 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 HEPN1Q6WQI6 88 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 CMTM2Q8TAZ6 248 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 NDUFB11Q9NX14 153 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 PRO0461Q9UI25 63 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 NAV3Q8IVL0 2385 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 BOD1L1Q8NFC6 3051 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 ITPR3Q14573 2671 aa2.65□□□□□ -1.99
CD44-213ENST00000525209 PRR14LQ5THK1 2151 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 IGLV3-16A0A075B6K0 115 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 TRBV7-1A0A0A6YYK4 115 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 A0A1W2PNM2 257 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 C2orf70A6NJV1 201 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 FREM3P0C091 2139 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 HMGN3Q15651 99 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 MRGPRG-AS1Q2M3A8 158 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 MPV17LQ2QL34 196 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 KIAA2026Q5HYC2 2103 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 SH2D6Q7Z4S9 175 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 CLECL1Q8IZS7 167 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 NXT2Q9NPJ8 142 aaKnown RBP2.64□□□□□ -1.99
CD44-213ENST00000525209 PRO2289Q9P1D8 64 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 C22orf24Q9Y442 160 aa2.64□□□□□ -1.99
CD44-213ENST00000525209 POLQO75417 2590 aa2.63□□□□□ -1.99
CD44-213ENST00000525209 H7BZZ5 65 aa2.63□□□□□ -1.99
CD44-213ENST00000525209 SIX6O95475 246 aa2.63□□□□□ -1.99
CD44-213ENST00000525209 CYP2G1PQ6ZSU1 146 aa2.63□□□□□ -1.99
CD44-213ENST00000525209 NDUFA11Q86Y39 141 aa2.63□□□□□ -1.99
CD44-213ENST00000525209 PATE1Q8WXA2 126 aa2.63□□□□□ -1.99
CD44-213ENST00000525209 LINC01600Q96MT4 127 aa2.63□□□□□ -1.99
CD44-213ENST00000525209 U3KQA8 63 aa2.63□□□□□ -1.99
CD44-213ENST00000525209 CRYBG3Q68DQ2 2970 aa2.63□□□□□ -1.99
CD44-213ENST00000525209 SHANK1Q9Y566 2161 aa2.62□□□□□ -1.99
CD44-213ENST00000525209 TRAV40A0A0B4J280 105 aa2.62□□□□□ -1.99
CD44-213ENST00000525209 IGHV3-33P01772 117 aa2.62□□□□□ -1.99
CD44-213ENST00000525209 PDE6HQ13956 83 aa2.62□□□□□ -1.99
CD44-213ENST00000525209 DEFB106AQ8N104 65 aa2.62□□□□□ -1.99
CD44-213ENST00000525209 HIGD1BQ9P298 99 aa2.62□□□□□ -1.99
CD44-213ENST00000525209 CNTRLQ7Z7A1 2325 aa2.62□□□□□ -1.99
CD44-213ENST00000525209 CENPEQ02224 2701 aa2.62□□□□□ -1.99
CD44-213ENST00000525209 PKDREJQ9NTG1 2253 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 NINQ8N4C6 2090 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 HEATR5BQ9P2D3 2071 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 KANTRA0A1W2PQU2 76 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 TMEM30CPA0ZSE6 113 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 H3BUT2 72 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 TFF1P04155 84 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 SPTBP11277 2137 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 UBE2D3P61077 147 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 UBE2D2P62837 147 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 MOBPQ13875 183 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 LY6EQ16553 131 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 SPATA45Q537H7 98 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 LYPD1Q8N2G4 141 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 FDCSPQ8NFU4 85 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 C18orf32Q8TCD1 76 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 FAM167A-AS1Q96KT0 104 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 LINC00167Q96N53 147 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 ODF3Q96PU9 254 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 TIMM21Q9BVV7 248 aa2.61□□□□□ -1.99
CD44-213ENST00000525209 PCNX1Q96RV3 2341 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 F8P00451 2351 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 TRAV12-3A0A0B4J271 114 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 BCE1O60756 84 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 IGKV3-15P01624 115 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 HRES1P13985 223 aa2.6□□□□□ -1.99
CD44-213ENST00000525209 KRTAP10-7P60409 375 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms