RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 Q6ZUT4 128 aa8.1□□□□□ -1.11
SMCO4-202ENST00000525141 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
SMCO4-202ENST00000525141 CHAC1Q9BUX1 264 aa8.1□□□□□ -1.11
SMCO4-202ENST00000525141 FOXI1Q12951 378 aa8.09□□□□□ -1.11
SMCO4-202ENST00000525141 CFAP161Q6P656 301 aa8.09□□□□□ -1.11
SMCO4-202ENST00000525141 CD164L2Q6UWJ8 174 aa8.09□□□□□ -1.11
SMCO4-202ENST00000525141 C18orf32Q8TCD1 76 aa8.09□□□□□ -1.11
SMCO4-202ENST00000525141 OPRPNQ99935 248 aaPredicted RBP8.09□□□□□ -1.11
SMCO4-202ENST00000525141 IGIPA6NJ69 53 aa8.08□□□□□ -1.12
SMCO4-202ENST00000525141 XCL1P47992 114 aa8.08□□□□□ -1.12
SMCO4-202ENST00000525141 RNASE13Q5GAN3 156 aaKnown RBP8.08□□□□□ -1.12
SMCO4-202ENST00000525141 FA2HQ7L5A8 372 aa8.08□□□□□ -1.12
SMCO4-202ENST00000525141 TOMM6Q96B49 74 aa8.08□□□□□ -1.12
SMCO4-202ENST00000525141 TMEM141Q96I45 108 aa8.08□□□□□ -1.12
SMCO4-202ENST00000525141 IGLV4-3A0A075B6K6 122 aa8.07□□□□□ -1.12
SMCO4-202ENST00000525141 TRAV13-1A0A0B4J241 112 aa8.07□□□□□ -1.12
SMCO4-202ENST00000525141 SLPIP03973 132 aa8.07□□□□□ -1.12
SMCO4-202ENST00000525141 LINC00614P0C842 121 aa8.07□□□□□ -1.12
SMCO4-202ENST00000525141 LRP1Q07954 4544 aaKnown RBP8.07□□□□□ -1.12
SMCO4-202ENST00000525141 COLCA2A8K830 154 aa8.06□□□□□ -1.12
SMCO4-202ENST00000525141 PANO1I0J062 215 aa8.06□□□□□ -1.12
SMCO4-202ENST00000525141 RAB5BP61020 215 aa8.06□□□□□ -1.12
SMCO4-202ENST00000525141 PAPPA-AS1Q5QFB9 102 aa8.06□□□□□ -1.12
SMCO4-202ENST00000525141 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
SMCO4-202ENST00000525141 ERASQ7Z444 233 aa8.06□□□□□ -1.12
SMCO4-202ENST00000525141 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
SMCO4-202ENST00000525141 TIMM17AQ99595 171 aa8.06□□□□□ -1.12
SMCO4-202ENST00000525141 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
SMCO4-202ENST00000525141 IFITM10A6NMD0 228 aa8.05□□□□□ -1.12
SMCO4-202ENST00000525141 PLA2G1BP04054 148 aaKnown RBP8.05□□□□□ -1.12
SMCO4-202ENST00000525141 Q6ZN92 141 aa8.05□□□□□ -1.12
SMCO4-202ENST00000525141 TEX43Q6ZNM6 134 aa8.05□□□□□ -1.12
SMCO4-202ENST00000525141 C15orf56Q8N910 161 aa8.05□□□□□ -1.12
SMCO4-202ENST00000525141 URB1-AS1Q96HZ7 61 aa8.05□□□□□ -1.12
SMCO4-202ENST00000525141 AMELXQ99217 191 aa8.05□□□□□ -1.12
SMCO4-202ENST00000525141 VCX2Q9H322 139 aa8.05□□□□□ -1.12
SMCO4-202ENST00000525141 PKHD1L1Q86WI1 4243 aa8.05□□□□□ -1.12
SMCO4-202ENST00000525141 IGHV1-58A0A0C4DH39 117 aa8.04□□□□□ -1.12
SMCO4-202ENST00000525141 hDV102S1A0JD36 115 aa8.04□□□□□ -1.12
SMCO4-202ENST00000525141 COX7A2LO14548 114 aa8.04□□□□□ -1.12
SMCO4-202ENST00000525141 TRGC2P03986 189 aa8.04□□□□□ -1.12
SMCO4-202ENST00000525141 CNBPP62633 177 aaKnown RBP8.04□□□□□ -1.12
SMCO4-202ENST00000525141 SCGB3A1Q96QR1 104 aa8.04□□□□□ -1.12
SMCO4-202ENST00000525141 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.04□□□□□ -1.12
SMCO4-202ENST00000525141 FAT3Q8TDW7 4589 aa8.03□□□□□ -1.12
SMCO4-202ENST00000525141 GVQW2A0A096LPI5 108 aaPredicted RBP8.03□□□□□ -1.12
SMCO4-202ENST00000525141 IGHV3OR16-9A0A0B4J2B5 98 aa8.03□□□□□ -1.12
SMCO4-202ENST00000525141 S100A1P23297 94 aa8.03□□□□□ -1.12
SMCO4-202ENST00000525141 LINC00173Q6ZV60 143 aa8.03□□□□□ -1.12
SMCO4-202ENST00000525141 C2orf88Q9BSF0 95 aa8.03□□□□□ -1.12
SMCO4-202ENST00000525141 KRTAP9-2Q9BYQ4 174 aa8.03□□□□□ -1.12
SMCO4-202ENST00000525141 KRTAP29-1A8MX34 341 aaPredicted RBP8.02□□□□□ -1.13
SMCO4-202ENST00000525141 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
SMCO4-202ENST00000525141 ATP6V1G1O75348 118 aa8.02□□□□□ -1.13
SMCO4-202ENST00000525141 MALP21145 153 aa8.02□□□□□ -1.13
SMCO4-202ENST00000525141 UBE2D1P51668 147 aa8.02□□□□□ -1.13
SMCO4-202ENST00000525141 LINC00242Q5T6M2 205 aa8.02□□□□□ -1.13
SMCO4-202ENST00000525141 FAM19A3Q7Z5A8 133 aa8.02□□□□□ -1.13
SMCO4-202ENST00000525141 A0A096LNJ9 63 aa8.01□□□□□ -1.13
SMCO4-202ENST00000525141 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.01□□□□□ -1.13
SMCO4-202ENST00000525141 APOMO95445 188 aa8.01□□□□□ -1.13
SMCO4-202ENST00000525141 C5orf38Q86SI9 138 aa8.01□□□□□ -1.13
SMCO4-202ENST00000525141 CHCHD1Q96BP2 118 aaKnown RBP8.01□□□□□ -1.13
SMCO4-202ENST00000525141 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8□□□□□ -1.13
SMCO4-202ENST00000525141 SCO1O75880 301 aa8□□□□□ -1.13
SMCO4-202ENST00000525141 HBDP02042 147 aa8□□□□□ -1.13
SMCO4-202ENST00000525141 SEC11AP67812 179 aa8□□□□□ -1.13
SMCO4-202ENST00000525141 ZC2HC1BQ5TFG8 222 aa8□□□□□ -1.13
SMCO4-202ENST00000525141 A0A087WZ39 114 aa7.99□□□□□ -1.13
SMCO4-202ENST00000525141 ZNF561-AS1K7EIQ3 104 aa7.99□□□□□ -1.13
SMCO4-202ENST00000525141 HNRNPA3P51991 378 aaKnown RBP7.99□□□□□ -1.13
SMCO4-202ENST00000525141 COX6A2Q02221 97 aa7.99□□□□□ -1.13
SMCO4-202ENST00000525141 CIRBPQ14011 172 aaKnown RBP7.99□□□□□ -1.13
SMCO4-202ENST00000525141 HIGD2BQ4VC39 106 aa7.99□□□□□ -1.13
SMCO4-202ENST00000525141 LINC01561Q8N1V8 128 aa7.99□□□□□ -1.13
SMCO4-202ENST00000525141 KRTAP9-6A0A140TA67 174 aa7.98□□□□□ -1.13
SMCO4-202ENST00000525141 PDZD11Q5EBL8 140 aa7.98□□□□□ -1.13
SMCO4-202ENST00000525141 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
SMCO4-202ENST00000525141 OR10D4PQ8NGN7 298 aa7.98□□□□□ -1.13
SMCO4-202ENST00000525141 CST9LQ9H4G1 147 aa7.98□□□□□ -1.13
SMCO4-202ENST00000525141 IGHV3-64A0A075B6Q5 118 aa7.97□□□□□ -1.13
SMCO4-202ENST00000525141 ATP5LO75964 103 aa7.97□□□□□ -1.13
SMCO4-202ENST00000525141 HERVK_113P63121 156 aa7.97□□□□□ -1.13
SMCO4-202ENST00000525141 PMVKQ15126 192 aa7.97□□□□□ -1.13
SMCO4-202ENST00000525141 C2orf48Q96LS8 159 aa7.97□□□□□ -1.13
SMCO4-202ENST00000525141 IGLV4-69A0A075B6H9 119 aa7.96□□□□□ -1.14
SMCO4-202ENST00000525141 F8WDY8 70 aa7.96□□□□□ -1.14
SMCO4-202ENST00000525141 CHTF8P0CG12 524 aa7.96□□□□□ -1.14
SMCO4-202ENST00000525141 PMCHL1Q16048 86 aa7.96□□□□□ -1.14
SMCO4-202ENST00000525141 A0A0J9YXV3 536 aa7.95□□□□□ -1.14
SMCO4-202ENST00000525141 TINCRA0A1B0GVN0 87 aa7.95□□□□□ -1.14
SMCO4-202ENST00000525141 HSBP1O75506 76 aa7.95□□□□□ -1.14
SMCO4-202ENST00000525141 SYCNQ0VAF6 134 aa7.95□□□□□ -1.14
SMCO4-202ENST00000525141 LINC00526Q96FQ7 95 aa7.95□□□□□ -1.14
SMCO4-202ENST00000525141 GEMIN7Q9H840 131 aaKnown RBP7.95□□□□□ -1.14
SMCO4-202ENST00000525141 RPL37AP61513 92 aaKnown RBP7.94□□□□□ -1.14
SMCO4-202ENST00000525141 ORAOV1Q8WV07 137 aa7.94□□□□□ -1.14
SMCO4-202ENST00000525141 IGLV5-45A0A087WSX0 123 aa7.93□□□□□ -1.14
SMCO4-202ENST00000525141 A0A087WYN8 130 aa7.93□□□□□ -1.14
SMCO4-202ENST00000525141 SERF1AO75920 110 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms