RNA–Protein interactions for RNA: ENST00000524291.1

VDAC3-212, Transcript of voltage dependent anion channel 3, humanhuman

TSL 2

Gene VDAC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-212ENST00000524291 USP9XQ93008 2570 aaPredicted RBP0.08□□□□□ -2.4
VDAC3-212ENST00000524291 CHD8Q9HCK8 2581 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 ACANP16112 2415 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 FAM135AQ9P2D6 1515 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 NSD3Q9BZ95 1437 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 CELSR1Q9NYQ6 3014 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 C20orf202A1L168 122 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 C10orf142B7Z368 130 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 MGPP08493 103 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 HSD52Q0P140 79 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 WFDC2Q14508 124 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 SPRR4Q96PI1 79 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 TENM4Q6N022 2769 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 MYO7BQ6PIF6 2116 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 DSPP15924 2871 aaKnown RBP0.08□□□□□ -2.4
VDAC3-212ENST00000524291 ARHGAP5Q13017 1502 aa0.08□□□□□ -2.4
VDAC3-212ENST00000524291 FLNCQ14315 2725 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 CREBBPQ92793 2442 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 NBEAL2Q6ZNJ1 2754 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 PEG3Q9GZU2 1588 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 NBEAL1Q6ZS30 2694 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 SETXQ7Z333 2677 aaKnown RBP0.07□□□□□ -2.4
VDAC3-212ENST00000524291 PTPRQQ9UMZ3 2332 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 NAP1L6A6NFF2 107 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 UBE2D3P61077 147 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 UBE2D2P62837 147 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 FAIMQ9NVQ4 179 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 SHANK2Q9UPX8 1470 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 USF3Q68DE3 2245 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 CSMD3Q7Z407 3707 aa0.07□□□□□ -2.4
VDAC3-212ENST00000524291 EP300Q09472 2414 aaPredicted RBP0.07□□□□□ -2.4
VDAC3-212ENST00000524291 FLNAP21333 2647 aaKnown RBP0.07□□□□□ -2.4
VDAC3-212ENST00000524291 MAP1BP46821 2468 aaKnown RBP0.07□□□□□ -2.4
VDAC3-212ENST00000524291 ANKRD11Q6UB99 2663 aaPredicted RBP0.07□□□□□ -2.4
VDAC3-212ENST00000524291 FASNP49327 2511 aaKnown RBP0.07□□□□□ -2.4
VDAC3-212ENST00000524291 DMBT1Q9UGM3 2413 aaPredicted RBP0.06□□□□□ -2.4
VDAC3-212ENST00000524291 PAPPAQ13219 1627 aa0.06□□□□□ -2.4
VDAC3-212ENST00000524291 WNK2Q9Y3S1 2297 aa0.06□□□□□ -2.4
VDAC3-212ENST00000524291 SCN7AQ01118 1682 aa0.06□□□□□ -2.4
VDAC3-212ENST00000524291 H3BQ15 152 aa0.06□□□□□ -2.4
VDAC3-212ENST00000524291 TMEM263Q8WUH6 116 aaKnown RBP0.06□□□□□ -2.4
VDAC3-212ENST00000524291 NF1P21359 2839 aa0.06□□□□□ -2.4
VDAC3-212ENST00000524291 MAP1AP78559 2803 aaPredicted RBP0.06□□□□□ -2.4
VDAC3-212ENST00000524291 EHBP1L1Q8N3D4 1523 aa0.06□□□□□ -2.4
VDAC3-212ENST00000524291 SONP18583 2426 aaKnown RBP0.06□□□□□ -2.4
VDAC3-212ENST00000524291 CHD6Q8TD26 2715 aa0.06□□□□□ -2.4
VDAC3-212ENST00000524291 BPTFQ12830 3046 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 PPRC1Q5VV67 1664 aaKnown RBP0.05□□□□□ -2.4
VDAC3-212ENST00000524291 NCOR1O75376 2440 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 COL7A1Q02388 2944 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 ACACBO00763 2458 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 UBR5O95071 2799 aaPredicted RBP0.05□□□□□ -2.4
VDAC3-212ENST00000524291 S100PP25815 95 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 WHAMMP3Q1A5X7 153 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 C10orf113Q5VZT2 155 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 PRO1854Q9UHT4 67 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 MYO18BQ8IUG5 2567 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 MUC12Q9UKN1 5478 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 COL6A5A8TX70 2615 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 TOP2BQ02880 1626 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 PTPN13Q12923 2485 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 CACNA1AO00555 2505 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 MGAM2Q2M2H8 2515 aa0.05□□□□□ -2.4
VDAC3-212ENST00000524291 STAB2Q8WWQ8 2551 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 AKAP6Q13023 2319 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 ARHGEF12Q9NZN5 1544 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 ITPR1Q14643 2758 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 MYO9AB2RTY4 2548 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 COL6A3P12111 3177 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 FXYD6-FXYD2A0A087WZ82 144 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 TRBV6-1A0A0K0K1D8 114 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 hADV29S1A0JD25 119 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 CRYM-AS1A6NIL9 109 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 FAM223BA6NKX1 122 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 TMEM262E9PQX1 116 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 COX6CP09669 75 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 TRAPPC2P0DI81 140 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 TRAPPC2BP0DI82 140 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 UBA52P62987 128 aaKnown RBP0.04□□□□□ -2.4
VDAC3-212ENST00000524291 DEFB109BQ30KR1 87 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 Q5VSD8 79 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 WDR87Q6ZQQ6 2873 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 ITPR2Q14571 2701 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 CHD1O14646 1710 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 CEP290O15078 2479 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 CCDC168Q8NDH2 2452 aa0.04□□□□□ -2.4
VDAC3-212ENST00000524291 FLNBO75369 2602 aaKnown RBP0.03□□□□□ -2.4
VDAC3-212ENST00000524291 ATRQ13535 2644 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 ZFYVE16Q7Z3T8 1539 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 TGP01266 2768 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 TENM2Q9NT68 2774 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 KMT2CQ8NEZ4 4911 aaKnown RBP0.03□□□□□ -2.4
VDAC3-212ENST00000524291 MTORP42345 2549 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 SPRR1AP35321 89 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 PIGYQ3MUY2 71 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 C14orf144Q96I85 54 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 ABCA3Q99758 1704 aa0.03□□□□□ -2.4
VDAC3-212ENST00000524291 BSNQ9UPA5 3926 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms