RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 IMUPQ9GZP8 106 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 SLC35B3Q9H1N7 401 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 POPDC3Q9HBV1 291 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 NDUFA12Q9UI09 145 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 OR2H2O95918 312 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 HLA-DRB4P13762 266 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 HSD11B1P28845 292 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 ZNF137PP52743 207 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 B2MP61769 119 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 PSG9Q00887 426 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 COX6A2Q02221 97 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 OR2T35Q8NGX2 323 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 TMEM254Q8TBM7 123 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 ARL11Q969Q4 196 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 GPER1Q99527 375 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 TTTY10Q9BZA0 68 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 PRO0255Q9UI72 69 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 ARL2BPQ9Y2Y0 163 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 FAM32AQ9Y421 112 aaKnown RBP0.72□□□□□ -2.29
PCM1-220ENST00000523896 HLA-DRB4X5D2U9 266 aa0.72□□□□□ -2.29
PCM1-220ENST00000523896 C20orf202A1L168 122 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 A8MWV9 139 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 HMGN4O00479 90 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 CCL25O15444 150 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 TIMM17BO60830 172 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 ATG12O94817 140 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 CYB5AP00167 134 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 HIST1H1BP16401 226 aaKnown RBP0.71□□□□□ -2.3
PCM1-220ENST00000523896 GOLT1AQ6ZVE7 132 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 SLC25A26Q70HW3 274 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 TTC9CQ8N5M4 171 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 BORCS5Q969J3 196 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 DGCR14Q96DF8 476 aaKnown RBP0.71□□□□□ -2.3
PCM1-220ENST00000523896 LINC00052Q96N35 136 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 GINS3Q9BRX5 216 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 ENY2Q9NPA8 101 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 CALML5Q9NZT1 146 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 PCTPQ9UKL6 214 aa0.71□□□□□ -2.3
PCM1-220ENST00000523896 TRGV1A0A0A0MS02 117 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 TRBV6-4A0A1B0GX49 114 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 M0R2Z0 102 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 TAX1BP3O14907 124 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 DEGS1O15121 323 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 SMIM24O75264 130 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 APOC1P02654 83 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 CSN2P05814 226 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 SAA2P0DJI9 122 aaPredicted RBP0.7□□□□□ -2.3
PCM1-220ENST00000523896 ETV6P41212 452 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 RPS27P42677 84 aaKnown RBP0.7□□□□□ -2.3
PCM1-220ENST00000523896 CRYBA4P53673 196 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 DEFB1P60022 68 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 UBE2D3P61077 147 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 HSPE1P61604 102 aaKnown RBP0.7□□□□□ -2.3
PCM1-220ENST00000523896 SPINK13Q1W4C9 94 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 Q56UQ5 140 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 FAM74A1Q5RGS3 127 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 SAMD13Q5VXD3 122 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 EIF5AL1Q6IS14 154 aaKnown RBP0.7□□□□□ -2.3
PCM1-220ENST00000523896 C4orf22Q6V702 233 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 TMEM263Q8WUH6 116 aaKnown RBP0.7□□□□□ -2.3
PCM1-220ENST00000523896 DYDC1Q8WWB3 177 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 C9orf16Q9BUW7 83 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 LINC00474Q9P2X8 69 aa0.7□□□□□ -2.3
PCM1-220ENST00000523896 TRAV12-2A0A075B6T6 113 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 A0A096LNI7 61 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 CPSF4LA6NMK7 179 aaKnown RBP0.69□□□□□ -2.3
PCM1-220ENST00000523896 APOA2P02652 100 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 ROMO1P60602 79 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 RPL38P63173 70 aaKnown RBP0.69□□□□□ -2.3
PCM1-220ENST00000523896 BCL2L15Q5TBC7 163 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 FOXI2Q6ZQN5 318 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 IDO2Q6ZQW0 420 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 ZNF833PQ6ZTB9 187 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 CANT1Q8WVQ1 401 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 C1orf54Q8WWF1 131 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 TP53RKQ96S44 253 aa0.69□□□□□ -2.3
PCM1-220ENST00000523896 SLC25A21Q9BQT8 299 aaPredicted RBP0.69□□□□□ -2.3
PCM1-220ENST00000523896 TRAV27A0A087WT01 109 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 FXYD6-FXYD2A0A087WZ82 144 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 IGHV1-58A0A0C4DH39 117 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 C5orf58C9J3I9 102 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 H0YJX3 145 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 M0R378 163 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 HMGB3O15347 200 aaKnown RBP0.68□□□□□ -2.3
PCM1-220ENST00000523896 NUPR1O60356 82 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 BANF1O75531 89 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 OR10J4P0C629 311 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 MRPS25P82663 173 aaKnown RBP0.68□□□□□ -2.3
PCM1-220ENST00000523896 PRCDQ00LT1 54 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 Q0VG73 95 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 VMA21Q3ZAQ7 101 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 RPL39P5Q59GN2 51 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 C2orf82Q6UX34 121 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 NEK7Q8TDX7 302 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 LZICQ8WZA0 190 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 TMEM203Q969S6 136 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 ARMC1Q9NVT9 282 aa0.68□□□□□ -2.3
PCM1-220ENST00000523896 TRBV20-1A0A075B6N2 111 aa0.67□□□□□ -2.3
PCM1-220ENST00000523896 TMEM30CPA0ZSE6 113 aa0.67□□□□□ -2.3
PCM1-220ENST00000523896 C9orf92A6NGG3 77 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms