RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 IGLV11-55A0A075B6I3 123 aa5.69□□□□□ -1.5
HMGB4-204ENST00000522796 SMIM1B2RUZ4 78 aa5.69□□□□□ -1.5
HMGB4-204ENST00000522796 LMO4P61968 165 aa5.69□□□□□ -1.5
HMGB4-204ENST00000522796 S4R3C0 116 aa5.69□□□□□ -1.5
HMGB4-204ENST00000522796 IGHV3-72A0A0B4J1Y9 119 aa5.68□□□□□ -1.5
HMGB4-204ENST00000522796 PLA2G1BP04054 148 aaKnown RBP5.68□□□□□ -1.5
HMGB4-204ENST00000522796 C22orf34Q6ZV56 151 aa5.68□□□□□ -1.5
HMGB4-204ENST00000522796 M0R2N4 97 aa5.68□□□□□ -1.5
HMGB4-204ENST00000522796 ELOF1P60002 83 aaKnown RBP5.68□□□□□ -1.5
HMGB4-204ENST00000522796 FAM74A4Q5TZK3 123 aa5.68□□□□□ -1.5
HMGB4-204ENST00000522796 KLK9Q9UKQ9 250 aa5.68□□□□□ -1.5
HMGB4-204ENST00000522796 DNAH14Q0VDD8 3507 aa5.67□□□□□ -1.5
HMGB4-204ENST00000522796 IGHV1-3A0A0C4DH29 117 aa5.67□□□□□ -1.5
HMGB4-204ENST00000522796 IGKV4-1P06312 121 aa5.67□□□□□ -1.5
HMGB4-204ENST00000522796 PRB3Q04118 309 aaPredicted RBP5.67□□□□□ -1.5
HMGB4-204ENST00000522796 ASB16-AS1Q495Z4 193 aa5.67□□□□□ -1.5
HMGB4-204ENST00000522796 RNF5Q99942 180 aa5.67□□□□□ -1.5
HMGB4-204ENST00000522796 CCL3L1P16619 93 aa5.66□□□□□ -1.5
HMGB4-204ENST00000522796 TRIOO75962 3097 aa5.66□□□□□ -1.5
HMGB4-204ENST00000522796 LINC01565O15544 149 aa5.66□□□□□ -1.5
HMGB4-204ENST00000522796 PRB1P04280 392 aa5.66□□□□□ -1.5
HMGB4-204ENST00000522796 ATP1A1-AS1Q5TC04 95 aa5.66□□□□□ -1.5
HMGB4-204ENST00000522796 NDUFB1O75438 58 aa5.65□□□□□ -1.5
HMGB4-204ENST00000522796 IGHV4-31P0DP07 118 aa5.65□□□□□ -1.5
HMGB4-204ENST00000522796 COX6A2Q02221 97 aa5.65□□□□□ -1.5
HMGB4-204ENST00000522796 LINC00476Q8WZB0 136 aa5.65□□□□□ -1.5
HMGB4-204ENST00000522796 IGKV3-15P01624 115 aa5.65□□□□□ -1.51
HMGB4-204ENST00000522796 CCL18P55774 89 aa5.65□□□□□ -1.51
HMGB4-204ENST00000522796 TFF2Q03403 129 aa5.65□□□□□ -1.51
HMGB4-204ENST00000522796 ZNF702PQ9H963 129 aa5.65□□□□□ -1.51
HMGB4-204ENST00000522796 TRBV6-4A0A1B0GX49 114 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 CASC2Q6XLA1 102 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 Q9BRP9 147 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 CHCHD7Q9BUK0 85 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 PRO3102Q9H379 93 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 VCANP13611 3396 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 IGHV3-49A0A0A0MS15 119 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 H3BQ85 93 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 LINC00242Q5T6M2 205 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 NOTCH2NLQ7Z3S9 236 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 PTPRQQ9UMZ3 2332 aa5.64□□□□□ -1.51
HMGB4-204ENST00000522796 IGLV1-51P01701 117 aa5.63□□□□□ -1.51
HMGB4-204ENST00000522796 ABCA1O95477 2261 aa5.63□□□□□ -1.51
HMGB4-204ENST00000522796 FSHBP01225 129 aa5.63□□□□□ -1.51
HMGB4-204ENST00000522796 RNASE1P07998 156 aaKnown RBP5.63□□□□□ -1.51
HMGB4-204ENST00000522796 A0A096LNT2 108 aa5.62□□□□□ -1.51
HMGB4-204ENST00000522796 DEFB114Q30KQ6 69 aa5.62□□□□□ -1.51
HMGB4-204ENST00000522796 ADM2Q7Z4H4 148 aa5.62□□□□□ -1.51
HMGB4-204ENST00000522796 DEFB108BQ8NET1 73 aa5.62□□□□□ -1.51
HMGB4-204ENST00000522796 LINC01006Q8NI28 216 aa5.62□□□□□ -1.51
HMGB4-204ENST00000522796 MUC7Q8TAX7 377 aa5.62□□□□□ -1.51
HMGB4-204ENST00000522796 B9D2Q9BPU9 175 aa5.62□□□□□ -1.51
HMGB4-204ENST00000522796 IGHV3OR16-8A0A075B7F1 116 aa5.62□□□□□ -1.51
HMGB4-204ENST00000522796 A0A087X002 238 aa5.62□□□□□ -1.51
HMGB4-204ENST00000522796 IGHV1-2P23083 117 aa5.62□□□□□ -1.51
HMGB4-204ENST00000522796 IGLV4-60A0A075B6I1 120 aa5.61□□□□□ -1.51
HMGB4-204ENST00000522796 IGHV3-23P01764 117 aa5.61□□□□□ -1.51
HMGB4-204ENST00000522796 LINC00208Q96KT6 92 aa5.61□□□□□ -1.51
HMGB4-204ENST00000522796 IGHV3OR16-12A0A075B7B8 117 aa5.6□□□□□ -1.51
HMGB4-204ENST00000522796 IGHV3-66A0A0C4DH42 116 aa5.6□□□□□ -1.51
HMGB4-204ENST00000522796 COX7B2Q8TF08 81 aa5.6□□□□□ -1.51
HMGB4-204ENST00000522796 IGHV7-81A0A0B4J1V7 117 aa5.6□□□□□ -1.51
HMGB4-204ENST00000522796 LINC00467Q9BRT7 94 aa5.6□□□□□ -1.51
HMGB4-204ENST00000522796 LINC00158P58513 81 aa5.59□□□□□ -1.51
HMGB4-204ENST00000522796 DEFB133Q30KQ1 61 aa5.59□□□□□ -1.51
HMGB4-204ENST00000522796 VPS13AQ96RL7 3174 aa5.59□□□□□ -1.51
HMGB4-204ENST00000522796 IGHV3-16A0A0C4DH30 117 aa5.59□□□□□ -1.51
HMGB4-204ENST00000522796 IGHV1-8P0DP01 117 aa5.59□□□□□ -1.51
HMGB4-204ENST00000522796 PRR4Q16378 134 aa5.58□□□□□ -1.52
HMGB4-204ENST00000522796 LINC00612Q8N6U2 182 aa5.58□□□□□ -1.52
HMGB4-204ENST00000522796 Q8N9L7 120 aa5.58□□□□□ -1.52
HMGB4-204ENST00000522796 IGHV3-35A0A0C4DH35 117 aa5.58□□□□□ -1.52
HMGB4-204ENST00000522796 IGLV1-44P01699 117 aa5.58□□□□□ -1.52
HMGB4-204ENST00000522796 IGHV3-53P01767 116 aa5.58□□□□□ -1.52
HMGB4-204ENST00000522796 C1orf134Q5TEV5 83 aa5.58□□□□□ -1.52
HMGB4-204ENST00000522796 SPANXA2-OT1Q8N9U9 137 aa5.58□□□□□ -1.52
HMGB4-204ENST00000522796 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.57□□□□□ -1.52
HMGB4-204ENST00000522796 ATP6V0E1O15342 81 aa5.57□□□□□ -1.52
HMGB4-204ENST00000522796 IGLV1-47P01700 117 aa5.57□□□□□ -1.52
HMGB4-204ENST00000522796 SMIM29Q86T20 159 aa5.57□□□□□ -1.52
HMGB4-204ENST00000522796 MUC3AQ02505 3323 aa5.57□□□□□ -1.52
HMGB4-204ENST00000522796 TRGV2A0A075B6R0 118 aa5.57□□□□□ -1.52
HMGB4-204ENST00000522796 LINC00575Q6W349 94 aa5.57□□□□□ -1.52
HMGB4-204ENST00000522796 NDUFA4O00483 81 aa5.56□□□□□ -1.52
HMGB4-204ENST00000522796 IGHV4-38-2P0DP08 117 aa5.56□□□□□ -1.52
HMGB4-204ENST00000522796 NPBQ8NG41 125 aa5.56□□□□□ -1.52
HMGB4-204ENST00000522796 IGHV3OR16-13A0A075B7E8 117 aa5.56□□□□□ -1.52
HMGB4-204ENST00000522796 IGHV3-74A0A0B4J1X5 117 aa5.56□□□□□ -1.52
HMGB4-204ENST00000522796 ETDCA0A1B0GVM5 59 aa5.56□□□□□ -1.52
HMGB4-204ENST00000522796 IGHV3-73A0A0B4J1V6 119 aa5.55□□□□□ -1.52
HMGB4-204ENST00000522796 WDR87Q6ZQQ6 2873 aa5.55□□□□□ -1.52
HMGB4-204ENST00000522796 INAFM1C9JVW0 142 aa5.55□□□□□ -1.52
HMGB4-204ENST00000522796 J3QL48 77 aa5.55□□□□□ -1.52
HMGB4-204ENST00000522796 PRB2P02812 416 aaPredicted RBP5.55□□□□□ -1.52
HMGB4-204ENST00000522796 Q8NAQ8 132 aa5.54□□□□□ -1.52
HMGB4-204ENST00000522796 COX7BP24311 80 aa5.54□□□□□ -1.52
HMGB4-204ENST00000522796 PLAC8Q9NZF1 115 aa5.54□□□□□ -1.52
HMGB4-204ENST00000522796 MGAQ8IWI9 3026 aa5.54□□□□□ -1.52
HMGB4-204ENST00000522796 HIGD2BQ4VC39 106 aa5.53□□□□□ -1.52
HMGB4-204ENST00000522796 LINC01558Q9Y6Z2 57 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms