RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 AQP4P55087 323 aa2.41□□□□□ -2.02
SDC2-206ENST00000521590 FOXA3P55318 350 aaPredicted RBP2.41□□□□□ -2.02
SDC2-206ENST00000521590 LSM3P62310 102 aaKnown RBP2.41□□□□□ -2.02
SDC2-206ENST00000521590 VAMP2P63027 116 aa2.41□□□□□ -2.02
SDC2-206ENST00000521590 LRRC37A5PQ49AS3 106 aa2.41□□□□□ -2.02
SDC2-206ENST00000521590 C2orf82Q6UX34 121 aa2.41□□□□□ -2.02
SDC2-206ENST00000521590 PQLC2Q6ZP29 291 aa2.41□□□□□ -2.02
SDC2-206ENST00000521590 C15orf40Q8WUR7 153 aa2.41□□□□□ -2.02
SDC2-206ENST00000521590 AP1S3Q96PC3 154 aa2.41□□□□□ -2.02
SDC2-206ENST00000521590 MCUBQ9NWR8 336 aa2.41□□□□□ -2.02
SDC2-206ENST00000521590 BLOC1S6Q9UL45 172 aa2.41□□□□□ -2.02
SDC2-206ENST00000521590 CHTOPQ9Y3Y2 248 aaKnown RBP2.41□□□□□ -2.02
SDC2-206ENST00000521590 HMGB3O15347 200 aaKnown RBP2.4□□□□□ -2.03
SDC2-206ENST00000521590 CXCL1P09341 107 aa2.4□□□□□ -2.03
SDC2-206ENST00000521590 RPL32P62910 135 aaKnown RBP2.4□□□□□ -2.03
SDC2-206ENST00000521590 HBG1P69891 147 aa2.4□□□□□ -2.03
SDC2-206ENST00000521590 HBG2P69892 147 aa2.4□□□□□ -2.03
SDC2-206ENST00000521590 MRPS10P82664 201 aaKnown RBP2.4□□□□□ -2.03
SDC2-206ENST00000521590 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
SDC2-206ENST00000521590 FAM19A1Q7Z5A9 133 aa2.4□□□□□ -2.03
SDC2-206ENST00000521590 CBLN2Q8IUK8 224 aa2.4□□□□□ -2.03
SDC2-206ENST00000521590 GNB1LQ9BYB4 327 aa2.4□□□□□ -2.03
SDC2-206ENST00000521590 WDR61Q9GZS3 305 aaKnown RBP2.4□□□□□ -2.03
SDC2-206ENST00000521590 LSM5Q9Y4Y9 91 aaKnown RBP2.4□□□□□ -2.03
SDC2-206ENST00000521590 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.03
SDC2-206ENST00000521590 TRAV13-1A0A0B4J241 112 aa2.39□□□□□ -2.03
SDC2-206ENST00000521590 NCS1P62166 190 aa2.39□□□□□ -2.03
SDC2-206ENST00000521590 RNASE13Q5GAN3 156 aaKnown RBP2.39□□□□□ -2.03
SDC2-206ENST00000521590 SSBP3-AS1Q7Z2R9 100 aa2.39□□□□□ -2.03
SDC2-206ENST00000521590 TMEM126AQ9H061 195 aa2.39□□□□□ -2.03
SDC2-206ENST00000521590 RBM38Q9H0Z9 239 aaKnown RBP2.39□□□□□ -2.03
SDC2-206ENST00000521590 IGLV5-37A0A075B6J1 123 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 IGKV2-28A0A075B6P5 120 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 TMEM238C9JI98 176 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 IGKV2D-28P01615 120 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 ARL14EPLP0DKL9 152 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 MOBPQ13875 183 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 STX12Q86Y82 276 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 GATD1Q8NB37 220 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 MCFD2Q8NI22 146 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 RPL39LQ96EH5 51 aaKnown RBP2.38□□□□□ -2.03
SDC2-206ENST00000521590 HIGD2AQ9BW72 106 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 MRPS26Q9BYN8 205 aaKnown RBP2.38□□□□□ -2.03
SDC2-206ENST00000521590 GEMIN7Q9H840 131 aaKnown RBP2.38□□□□□ -2.03
SDC2-206ENST00000521590 KCNIP2Q9NS61 270 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 ZFP30Q9Y2G7 519 aa2.38□□□□□ -2.03
SDC2-206ENST00000521590 C17orf112F2Z3M2 114 aa2.37□□□□□ -2.03
SDC2-206ENST00000521590 M0R378 163 aa2.37□□□□□ -2.03
SDC2-206ENST00000521590 SCO1O75880 301 aa2.37□□□□□ -2.03
SDC2-206ENST00000521590 LINC00483Q53H64 154 aa2.37□□□□□ -2.03
SDC2-206ENST00000521590 CNBD2Q96M20 576 aa2.37□□□□□ -2.03
SDC2-206ENST00000521590 CCDC32Q9BV29 185 aa2.37□□□□□ -2.03
SDC2-206ENST00000521590 VCXQ9H320 206 aa2.37□□□□□ -2.03
SDC2-206ENST00000521590 CSDC2Q9Y534 153 aaKnown RBP2.37□□□□□ -2.03
SDC2-206ENST00000521590 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
SDC2-206ENST00000521590 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
SDC2-206ENST00000521590 SDHAF1A6NFY7 115 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 NOL3O60936 208 aaKnown RBP2.36□□□□□ -2.03
SDC2-206ENST00000521590 STAG3L2P0CL84 134 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 STAG3L3P0CL85 134 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 GCHFRP30047 84 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 IL15RAQ13261 267 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 NEDD8Q15843 81 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 KIAA1644Q3SXP7 199 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 MZT2BQ6NZ67 158 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 FAM231DQ6ZW35 169 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 LINC01551Q86U37 167 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 FAM104AQ969W3 186 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 MRAP2Q96G30 205 aa2.36□□□□□ -2.03
SDC2-206ENST00000521590 RNASE7Q9H1E1 156 aaKnown RBP2.36□□□□□ -2.03
SDC2-206ENST00000521590 IGLV9-49A0A0B4J1Y8 123 aa2.35□□□□□ -2.03
SDC2-206ENST00000521590 A0A1W2PPV4 95 aa2.35□□□□□ -2.03
SDC2-206ENST00000521590 I3L3M4 83 aa2.35□□□□□ -2.03
SDC2-206ENST00000521590 PEX7O00628 323 aa2.35□□□□□ -2.03
SDC2-206ENST00000521590 LTAP01374 205 aa2.35□□□□□ -2.03
SDC2-206ENST00000521590 IGLC6P0CF74 106 aa2.35□□□□□ -2.03
SDC2-206ENST00000521590 VBP1P61758 197 aa2.35□□□□□ -2.03
SDC2-206ENST00000521590 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
SDC2-206ENST00000521590 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
SDC2-206ENST00000521590 TMEM18Q96B42 140 aa2.35□□□□□ -2.03
SDC2-206ENST00000521590 ZNF706Q9Y5V0 76 aaPredicted RBP2.35□□□□□ -2.03
SDC2-206ENST00000521590 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
SDC2-206ENST00000521590 A0A1W2PRE2 83 aa2.34□□□□□ -2.03
SDC2-206ENST00000521590 MT1BP07438 61 aa2.34□□□□□ -2.03
SDC2-206ENST00000521590 PMCHP20382 165 aa2.34□□□□□ -2.03
SDC2-206ENST00000521590 PVALBP20472 110 aaPredicted RBP2.34□□□□□ -2.03
SDC2-206ENST00000521590 Q6ZUT4 128 aa2.34□□□□□ -2.03
SDC2-206ENST00000521590 HIST1H2BAQ96A08 127 aa2.33□□□□□ -2.04
SDC2-206ENST00000521590 FMC1Q96HJ9 113 aa2.33□□□□□ -2.04
SDC2-206ENST00000521590 TMEM242Q9NWH2 141 aa2.33□□□□□ -2.04
SDC2-206ENST00000521590 TRBV20-1A0A075B6N2 111 aa2.32□□□□□ -2.04
SDC2-206ENST00000521590 TRBV6-5A0A0K0K1A5 114 aa2.32□□□□□ -2.04
SDC2-206ENST00000521590 C7orf77A4D0Y5 90 aa2.32□□□□□ -2.04
SDC2-206ENST00000521590 NDUFB6O95139 128 aa2.32□□□□□ -2.04
SDC2-206ENST00000521590 TRGC1P0CF51 173 aa2.32□□□□□ -2.04
SDC2-206ENST00000521590 FAUP35544 74 aaKnown RBP2.32□□□□□ -2.04
SDC2-206ENST00000521590 C6orf99Q4VX62 202 aa2.32□□□□□ -2.04
SDC2-206ENST00000521590 ATP11AUNQ6ZP68 121 aa2.32□□□□□ -2.04
SDC2-206ENST00000521590 NKAPP1Q8N9T2 125 aa2.32□□□□□ -2.04
SDC2-206ENST00000521590 FAM210AQ96ND0 272 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms