RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 SLC17A3O00476 420 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 UPK2O00526 184 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 OR7C2O60412 319 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 APOA2P02652 100 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 C3orf79P0CE67 100 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 CRYBB3P26998 211 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 SRIP30626 198 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 RPL27AP46776 148 aaKnown RBP2.36□□□□□ -2.03
VPS13B-208ENST00000521037 SEC11AP67812 179 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 HBBP68871 147 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 ERHP84090 104 aaKnown RBP2.36□□□□□ -2.03
VPS13B-208ENST00000521037 REG3AQ06141 175 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 BATFQ16520 125 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 TDRG1Q3Y452 100 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 VMA21Q3ZAQ7 101 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 Q6AWC8 147 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 SLC25A34Q6PIV7 304 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 CAMK2N1Q7Z7J9 78 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 NIT1Q86X76 327 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 C14orf178Q8N769 122 aaPredicted RBP2.36□□□□□ -2.03
VPS13B-208ENST00000521037 C18orf32Q8TCD1 76 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 FMC1Q96HJ9 113 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 IGF2BP2-AS1Q96M15 143 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 GPR82Q96P67 336 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 NDFIP1Q9BT67 221 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 TMEM191AQ9H0A3 160 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 C21orf62Q9NYP8 219 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 MRPL36Q9P0J6 103 aaKnown RBP2.36□□□□□ -2.03
VPS13B-208ENST00000521037 ZNF492Q9P255 531 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 TRAV8-4A0A0B4J246 113 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 FAM240AA0A1B0GVK7 77 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 A0A1B0GXF2 115 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 GGTLC3B5MD39 225 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 H0Y9J4 135 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 CORTO00230 105 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 CCL25O15444 150 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 COX7A2P2O60397 106 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 P01737 135 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 MGST1P10620 155 aaKnown RBP2.35□□□□□ -2.03
VPS13B-208ENST00000521037 NTF3P20783 257 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 CSN1S1P47710 185 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 FOXA3P55318 350 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-208ENST00000521037 HERVK_113P61574 105 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 RBX1P62877 108 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 UBE2L3P68036 154 aaKnown RBP2.35□□□□□ -2.03
VPS13B-208ENST00000521037 HIST1H1AQ02539 215 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-208ENST00000521037 CD164Q04900 197 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 LYPD5Q6UWN5 251 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 GTF2H5Q6ZYL4 71 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 MIR17HGQ75NE6 70 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 C5orf17Q8NAS9 161 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 NUP35Q8NFH5 326 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 OR10AG1Q8NH19 301 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 LINC00467Q9BRT7 94 aa2.35□□□□□ -2.03
VPS13B-208ENST00000521037 RNASE7Q9H1E1 156 aaKnown RBP2.35□□□□□ -2.03
VPS13B-208ENST00000521037 FLGP20930 4061 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-208ENST00000521037 TEX50A0A1B0GTY4 177 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 HIGD1CA8MV81 97 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 SYS1-DBNDD2H3BUS1 97 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 LEPROTL1O95214 131 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 ORM1P02763 201 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 RNASE2P10153 161 aaKnown RBP2.34□□□□□ -2.03
VPS13B-208ENST00000521037 S100A7P31151 101 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 HINT1P49773 126 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-208ENST00000521037 RRN3P1Q2M238 152 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 Q56UQ5 140 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 SPINK9Q5DT21 86 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 C10orf113Q5VZT2 155 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 SPATA31B1PQ5VZV4 182 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 GATD1Q8NB37 220 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 FAM167A-AS1Q96KT0 104 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 TRGV9Q99603 122 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 SLC25A2Q9BXI2 301 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 RPP21Q9H633 154 aaKnown RBP2.34□□□□□ -2.03
VPS13B-208ENST00000521037 OTORQ9NRC9 128 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 NDUFA4L2Q9NRX3 87 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 TMEM14CQ9P0S9 112 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 RABAC1Q9UI14 185 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 EPDR1Q9UM22 224 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 PSG8Q9UQ74 426 aa2.34□□□□□ -2.03
VPS13B-208ENST00000521037 A0A1B0GUT8 65 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 IBA57-AS1B1ANH7 110 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 F2Z2F3 143 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 H3BRM9 83 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 LTAP01374 205 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 SLC25A5P05141 298 aaKnown RBP2.33□□□□□ -2.04
VPS13B-208ENST00000521037 NBEAP1P0C6P0 100 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 SMIM17P0DL12 118 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 COX8AP10176 69 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 DEFA4P12838 97 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 TCL1AP56279 114 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 PDE6HQ13956 83 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 CIRBPQ14011 172 aaKnown RBP2.33□□□□□ -2.04
VPS13B-208ENST00000521037 OCIAD2Q56VL3 154 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 BVES-AS1Q5T3Y7 98 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 LINC01545Q5VT33 79 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 EBLN2Q6P2I7 272 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 Q6ZVH6 145 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 BPIFA4PQ86YQ2 179 aa2.33□□□□□ -2.04
VPS13B-208ENST00000521037 FAM19A2Q8N3H0 131 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms