RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TRBV6-8A0A0A6YYG3 113 aa7.27□□□□□ -1.25
MCF2-209ENST00000520602 A0A1B0GV72 72 aa7.27□□□□□ -1.25
MCF2-209ENST00000520602 SPART-AS1P0CW21 52 aa7.27□□□□□ -1.25
MCF2-209ENST00000520602 COX6A2Q02221 97 aa7.27□□□□□ -1.25
MCF2-209ENST00000520602 UFSP1Q6NVU6 142 aa7.27□□□□□ -1.25
MCF2-209ENST00000520602 COX7B2Q8TF08 81 aa7.27□□□□□ -1.25
MCF2-209ENST00000520602 MIAQ16674 131 aa7.27□□□□□ -1.25
MCF2-209ENST00000520602 TEP1Q99973 2627 aaKnown RBP7.27□□□□□ -1.25
MCF2-209ENST00000520602 TRAV26-1A0A087WT03 109 aa7.26□□□□□ -1.25
MCF2-209ENST00000520602 RBX1P62877 108 aa7.26□□□□□ -1.25
MCF2-209ENST00000520602 LINC00242Q5T6M2 205 aa7.26□□□□□ -1.25
MCF2-209ENST00000520602 IFITM1P13164 125 aa7.26□□□□□ -1.25
MCF2-209ENST00000520602 TIRAPP58753 221 aa7.26□□□□□ -1.25
MCF2-209ENST00000520602 NTN5Q8WTR8 489 aaPredicted RBP7.26□□□□□ -1.25
MCF2-209ENST00000520602 PPDPFLQ8WWR9 84 aa7.26□□□□□ -1.25
MCF2-209ENST00000520602 ICOSQ9Y6W8 199 aa7.26□□□□□ -1.25
MCF2-209ENST00000520602 GAGE12HA6NDE8 117 aa7.25□□□□□ -1.25
MCF2-209ENST00000520602 CLEC2BQ92478 149 aa7.25□□□□□ -1.25
MCF2-209ENST00000520602 NBEAL2Q6ZNJ1 2754 aa7.25□□□□□ -1.25
MCF2-209ENST00000520602 IGHV3-33P01772 117 aa7.25□□□□□ -1.25
MCF2-209ENST00000520602 CDC42SE2Q9NRR3 84 aa7.25□□□□□ -1.25
MCF2-209ENST00000520602 G3V4G9 280 aa7.25□□□□□ -1.25
MCF2-209ENST00000520602 ZFAND6Q6FIF0 208 aa7.25□□□□□ -1.25
MCF2-209ENST00000520602 MIR7-3HGQ8N6C7 128 aa7.25□□□□□ -1.25
MCF2-209ENST00000520602 HERV-K104P63124 156 aa7.24□□□□□ -1.25
MCF2-209ENST00000520602 ADAMTSL4-AS1Q5T5F5 129 aa7.24□□□□□ -1.25
MCF2-209ENST00000520602 KRTAP1-1Q07627 177 aa7.24□□□□□ -1.25
MCF2-209ENST00000520602 MRPL23Q16540 153 aaKnown RBP7.24□□□□□ -1.25
MCF2-209ENST00000520602 CARD19Q96LW7 228 aa7.24□□□□□ -1.25
MCF2-209ENST00000520602 CLUHP3Q96NS8 147 aa7.24□□□□□ -1.25
MCF2-209ENST00000520602 SND1-IT1Q9HBX3 110 aa7.24□□□□□ -1.25
MCF2-209ENST00000520602 IGHV4-28A0A0C4DH34 117 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 UBR5O95071 2799 aaPredicted RBP7.23□□□□□ -1.25
MCF2-209ENST00000520602 LINC01620Q4KN68 170 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 OXLD1Q5BKU9 147 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 NTM-AS1Q6ZSK4 140 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 LINC00269Q8N2A0 174 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 TRAV8-4A0A0B4J246 113 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 FHL2Q14192 279 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 UBE2WQ96B02 151 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 IGLV4-60A0A075B6I1 120 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 SMIM9A6NGZ8 99 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 MRAPQ8TCY5 172 aa7.23□□□□□ -1.25
MCF2-209ENST00000520602 NDUFA1O15239 70 aa7.22□□□□□ -1.25
MCF2-209ENST00000520602 S100A7L2Q5SY68 101 aa7.22□□□□□ -1.25
MCF2-209ENST00000520602 FAM110AQ9BQ89 295 aa7.22□□□□□ -1.25
MCF2-209ENST00000520602 ANKRD29Q8N6D5 301 aa7.22□□□□□ -1.25
MCF2-209ENST00000520602 LINC00308Q8TCZ7 52 aa7.22□□□□□ -1.25
MCF2-209ENST00000520602 KLK12Q9UKR0 248 aa7.22□□□□□ -1.25
MCF2-209ENST00000520602 A8MTW9 85 aa7.22□□□□□ -1.25
MCF2-209ENST00000520602 TEN1Q86WV5 123 aa7.22□□□□□ -1.25
MCF2-209ENST00000520602 TRIAP1O43715 76 aa7.21□□□□□ -1.25
MCF2-209ENST00000520602 FOXI1Q12951 378 aa7.21□□□□□ -1.26
MCF2-209ENST00000520602 LYRM9A8MSI8 78 aa7.21□□□□□ -1.26
MCF2-209ENST00000520602 COX7A2LO14548 114 aa7.21□□□□□ -1.26
MCF2-209ENST00000520602 MAST4O15021 2626 aa7.21□□□□□ -1.26
MCF2-209ENST00000520602 SMIM1B2RUZ4 78 aa7.2□□□□□ -1.26
MCF2-209ENST00000520602 TRAV13-2A0A0B4J235 113 aa7.2□□□□□ -1.26
MCF2-209ENST00000520602 IGHV4-30-4P0DP06 118 aa7.19□□□□□ -1.26
MCF2-209ENST00000520602 OVOL2Q9BRP0 275 aa7.19□□□□□ -1.26
MCF2-209ENST00000520602 EDA2RQ9HAV5 297 aa7.19□□□□□ -1.26
MCF2-209ENST00000520602 TTC32Q5I0X7 151 aa7.19□□□□□ -1.26
MCF2-209ENST00000520602 H7C423 109 aa7.18□□□□□ -1.26
MCF2-209ENST00000520602 GIG44P09565 113 aaPredicted RBP7.18□□□□□ -1.26
MCF2-209ENST00000520602 LINC00959A0A1B0GUT2 108 aa7.18□□□□□ -1.26
MCF2-209ENST00000520602 REG3AQ06141 175 aa7.18□□□□□ -1.26
MCF2-209ENST00000520602 SPANXDQ9BXN6 97 aa7.18□□□□□ -1.26
MCF2-209ENST00000520602 SPANXCQ9NY87 97 aa7.18□□□□□ -1.26
MCF2-209ENST00000520602 ZNF561-AS1K7EIQ3 104 aa7.18□□□□□ -1.26
MCF2-209ENST00000520602 KRTAP10-3P60369 221 aa7.18□□□□□ -1.26
MCF2-209ENST00000520602 KIR2DL5BQ8NHK3 375 aa7.17□□□□□ -1.26
MCF2-209ENST00000520602 MIFP14174 115 aa7.17□□□□□ -1.26
MCF2-209ENST00000520602 CHCHD10Q8WYQ3 142 aaPredicted RBP7.17□□□□□ -1.26
MCF2-209ENST00000520602 LINC00526Q96FQ7 95 aa7.17□□□□□ -1.26
MCF2-209ENST00000520602 CSDC2Q9Y534 153 aaKnown RBP7.17□□□□□ -1.26
MCF2-209ENST00000520602 Q9HAA7 133 aa7.16□□□□□ -1.26
MCF2-209ENST00000520602 BAALC-AS2P0C853 105 aa7.16□□□□□ -1.26
MCF2-209ENST00000520602 C19orf73Q9NVV2 129 aa7.16□□□□□ -1.26
MCF2-209ENST00000520602 TRBV10-2A0A0K0K1G8 114 aa7.16□□□□□ -1.26
MCF2-209ENST00000520602 RETNQ9HD89 108 aa7.16□□□□□ -1.26
MCF2-209ENST00000520602 TIMM17BO60830 172 aa7.15□□□□□ -1.26
MCF2-209ENST00000520602 GAGE2BQ13066 116 aa7.15□□□□□ -1.26
MCF2-209ENST00000520602 GAGE2EQ4V326 116 aa7.15□□□□□ -1.26
MCF2-209ENST00000520602 GAGE2DQ9UEU5 116 aa7.15□□□□□ -1.26
MCF2-209ENST00000520602 TRBV30A0A0K0K1B3 111 aa7.15□□□□□ -1.26
MCF2-209ENST00000520602 TEX49A0A1B0GTD5 131 aa7.15□□□□□ -1.26
MCF2-209ENST00000520602 PRB2P02812 416 aaPredicted RBP7.15□□□□□ -1.27
MCF2-209ENST00000520602 GAGE2AQ6NT46 116 aa7.15□□□□□ -1.27
MCF2-209ENST00000520602 IGKV2D-24A0A075B6R9 120 aa7.14□□□□□ -1.27
MCF2-209ENST00000520602 SPAG11BQ08648 103 aa7.14□□□□□ -1.27
MCF2-209ENST00000520602 CSNK1G2-AS1Q8NCQ2 148 aa7.14□□□□□ -1.27
MCF2-209ENST00000520602 X6R8D5 127 aa7.14□□□□□ -1.27
MCF2-209ENST00000520602 CSMD2Q7Z408 3487 aa7.13□□□□□ -1.27
MCF2-209ENST00000520602 SPATA3Q8NHX4 192 aa7.12□□□□□ -1.27
MCF2-209ENST00000520602 CELA1Q9UNI1 258 aa7.12□□□□□ -1.27
MCF2-209ENST00000520602 PLAC8L1A1L4L8 177 aa7.12□□□□□ -1.27
MCF2-209ENST00000520602 IBA57-AS1B1ANH7 110 aa7.12□□□□□ -1.27
MCF2-209ENST00000520602 MGAM2Q2M2H8 2515 aa7.12□□□□□ -1.27
MCF2-209ENST00000520602 NCR3O14931 201 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms