RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 C20orf203Q8NBC4 194 aa3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 TMEM141Q96I45 108 aa3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 HIST1H4GQ99525 98 aa3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 TMEM208Q9BTX3 173 aa3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 ZMAT5Q9UDW3 170 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 NOTCH3Q9UM47 2321 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 I3L3M4 83 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 SIVA1O15304 175 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 IGHV3-53P01767 116 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 EMP1P54849 157 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 TSPEAR-AS2P59090 65 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 PMVKQ15126 192 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 TMEM97Q5BJF2 176 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 C12orf54Q6X4T0 127 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 Q6ZTI0 123 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 TMEM263Q8WUH6 116 aaKnown RBP3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 ORAOV1Q8WV07 137 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 PRADC1Q9BSG0 188 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 CHCHD7Q9BUK0 85 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 CHAC1Q9BUX1 264 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 CST9LQ9H4G1 147 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 HIGD1BQ9P298 99 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 TENM1Q9UKZ4 2725 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 TRRAPQ9Y4A5 3859 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 ANK2Q01484 3957 aa3.32□□□□□ -1.88
CTNNA1-212ENST00000518919 F8P00451 2351 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 TRBV25-1A0A075B6N4 114 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 TRGV1A0A0A0MS02 117 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 TRAV8-6A0A0B4J262 113 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 TRAV4A0A0B4J268 109 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 LINC01549A6NIU2 74 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 K7EP13 123 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 CRLF1O75462 422 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 TSPAN13O95857 204 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 FXYD2P54710 66 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 CMC4P56277 68 aaPredicted RBP3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 SEC11AP67812 179 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 EGFEM1PQ0D2K5 195 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 Q6ZUT4 128 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 OR11H2Q8NH07 326 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 ZNRF2Q8NHG8 242 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 TYMSOSQ8TAI1 123 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 C16orf74Q96GX8 76 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 KRTAP1-5Q9BYS1 174 aa3.31□□□□□ -1.88
CTNNA1-212ENST00000518919 FLNBO75369 2602 aaKnown RBP3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 TRBV7-3A0A075B6L6 115 aa3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 MYMXA0A1B0GTQ4 84 aa3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 IGKV2-29A2NJV5 120 aaPredicted RBP3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 K7ERJ3 54 aa3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 ZNF22P17026 224 aaPredicted RBP3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 DAZ2Q13117 558 aaKnown RBP3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 CEMP1Q6PRD7 247 aaPredicted RBP3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 PLEKHB2Q96CS7 222 aa3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 DNAJC30Q96LL9 226 aa3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 AMELXQ99217 191 aa3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 KRTAP9-8Q9BYQ0 159 aa3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 NOP10Q9NPE3 64 aaKnown RBP3.3□□□□□ -1.88
CTNNA1-212ENST00000518919 ATRQ13535 2644 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 A0A0J9YXV3 536 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 TRBV10-1A0A0K0K1A3 114 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 TMEM223A0PJW6 202 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 ZNF815PA8K554 130 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 LINC00694P0DN24 101 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 UBE2D3P61077 147 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 HERVK_113P61574 105 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 UBE2D2P62837 147 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 COTL1Q14019 142 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 SBSPONQ8IVN8 264 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 C6orf223Q8N319 242 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 LINC00612Q8N6U2 182 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 OR5A1Q8NGJ0 315 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 SPANXA1Q9NS26 97 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 UBE2D4Q9Y2X8 147 aa3.29□□□□□ -1.88
CTNNA1-212ENST00000518919 A6NDN8 102 aa3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 H3BRM9 83 aa3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 CCL25O15444 150 aa3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 MRPS36P82909 103 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 TAL2Q16559 108 aa3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 RRN3P1Q2M238 152 aa3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 TMEM170BQ5T4T1 132 aa3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 NTM-AS1Q6ZSK4 140 aa3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 CEND1Q8N111 149 aa3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 SLC25A29Q8N8R3 303 aa3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 NAA38Q9BRA0 125 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 HUWE1Q7Z6Z7 4374 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-212ENST00000518919 A0A0J9YY99 117 aa3.27□□□□□ -1.89
CTNNA1-212ENST00000518919 J3QQQ9 107 aa3.27□□□□□ -1.89
CTNNA1-212ENST00000518919 LEPROTO15243 131 aa3.27□□□□□ -1.89
CTNNA1-212ENST00000518919 INSL3P51460 131 aa3.27□□□□□ -1.89
CTNNA1-212ENST00000518919 UBE2D1P51668 147 aa3.27□□□□□ -1.89
CTNNA1-212ENST00000518919 CRYBA4P53673 196 aa3.27□□□□□ -1.89
CTNNA1-212ENST00000518919 VAMP3Q15836 100 aa3.27□□□□□ -1.89
CTNNA1-212ENST00000518919 TIMM21Q9BVV7 248 aa3.27□□□□□ -1.89
CTNNA1-212ENST00000518919 TEP1Q99973 2627 aaKnown RBP3.26□□□□□ -1.89
CTNNA1-212ENST00000518919 BAHCC1Q9P281 2608 aa3.26□□□□□ -1.89
CTNNA1-212ENST00000518919 IGHV3-64A0A075B6Q5 118 aa3.26□□□□□ -1.89
CTNNA1-212ENST00000518919 TRGV2A0A075B6R0 118 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms