RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 CEP350Q5VT06 3117 aa2.47□□□□□ -2.01
CTNNA1-202ENST00000517533 ZGRF1Q86YA3 2104 aa2.47□□□□□ -2.01
CTNNA1-202ENST00000517533 TET1Q8NFU7 2136 aa2.47□□□□□ -2.01
CTNNA1-202ENST00000517533 CENPFP49454 3210 aa2.47□□□□□ -2.01
CTNNA1-202ENST00000517533 TRBV7-3A0A075B6L6 115 aa2.47□□□□□ -2.01
CTNNA1-202ENST00000517533 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
CTNNA1-202ENST00000517533 SSBP1Q04837 148 aaKnown RBP2.47□□□□□ -2.01
CTNNA1-202ENST00000517533 UNQ6190/PRO20217Q6UXQ8 127 aa2.47□□□□□ -2.01
CTNNA1-202ENST00000517533 LINC00208Q96KT6 92 aa2.47□□□□□ -2.01
CTNNA1-202ENST00000517533 HTTP42858 3142 aa2.46□□□□□ -2.02
CTNNA1-202ENST00000517533 KRTDAPP60985 99 aa2.46□□□□□ -2.02
CTNNA1-202ENST00000517533 ZNF56Q15929 161 aa2.46□□□□□ -2.02
CTNNA1-202ENST00000517533 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
CTNNA1-202ENST00000517533 XAF1Q6GPH4 301 aa2.46□□□□□ -2.02
CTNNA1-202ENST00000517533 COX7B2Q8TF08 81 aa2.46□□□□□ -2.02
CTNNA1-202ENST00000517533 MANBALQ9NQG1 85 aa2.46□□□□□ -2.02
CTNNA1-202ENST00000517533 Q5VV11 94 aa2.45□□□□□ -2.02
CTNNA1-202ENST00000517533 PDCD11Q14690 1871 aaKnown RBP2.45□□□□□ -2.02
CTNNA1-202ENST00000517533 KIAA0100Q14667 2235 aaKnown RBP2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 IGKV2-40A0A087WW87 121 aaPredicted RBP2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 ATOX1O00244 68 aa2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 IGKV2D-40P01614 121 aaPredicted RBP2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 HMGA1P17096 107 aaKnown RBP2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 FAUP35544 74 aaKnown RBP2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 ASIPP42127 132 aa2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 NCBP2-AS2Q69YL0 99 aa2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 ZCCHC13Q8WW36 166 aaKnown RBP2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 LCN9Q8WX39 176 aa2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 MED13Q9UHV7 2174 aa2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 BAHCC1Q9P281 2608 aa2.44□□□□□ -2.02
CTNNA1-202ENST00000517533 TANC1Q9C0D5 1861 aa2.43□□□□□ -2.02
CTNNA1-202ENST00000517533 A0A087WTM6 91 aa2.43□□□□□ -2.02
CTNNA1-202ENST00000517533 TRAV22A0A0B4J277 110 aa2.43□□□□□ -2.02
CTNNA1-202ENST00000517533 TRBV7-7A0A0K0K1E9 115 aa2.43□□□□□ -2.02
CTNNA1-202ENST00000517533 SFT2D2O95562 160 aa2.43□□□□□ -2.02
CTNNA1-202ENST00000517533 ELOF1P60002 83 aaKnown RBP2.43□□□□□ -2.02
CTNNA1-202ENST00000517533 C20orf78Q9BR46 151 aa2.43□□□□□ -2.02
CTNNA1-202ENST00000517533 CHKB-CPT1BH3BT56 60 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 K7EP34 96 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 FXYD1O00168 92 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 EDDM3BP56851 147 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 UBE2D3P61077 147 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 UBE2D2P62837 147 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 SFTA2Q6UW10 78 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 FAM167A-AS1Q96KT0 104 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 NDUFA4L2Q9NRX3 87 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 BET1LQ9NYM9 111 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 BRCA2P51587 3418 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 ESPL1Q14674 2120 aa2.42□□□□□ -2.02
CTNNA1-202ENST00000517533 COL4A6Q14031 1691 aa2.41□□□□□ -2.02
CTNNA1-202ENST00000517533 TSC2P49815 1807 aa2.41□□□□□ -2.02
CTNNA1-202ENST00000517533 APOC3P02656 99 aa2.41□□□□□ -2.02
CTNNA1-202ENST00000517533 NMBP08949 121 aa2.41□□□□□ -2.02
CTNNA1-202ENST00000517533 MGST2Q99735 147 aa2.41□□□□□ -2.02
CTNNA1-202ENST00000517533 BPESC1Q9GZL8 116 aa2.41□□□□□ -2.02
CTNNA1-202ENST00000517533 INTS1Q8N201 2190 aaKnown RBP2.41□□□□□ -2.02
CTNNA1-202ENST00000517533 LOC285095A0A1B0GVY8 99 aa2.4□□□□□ -2.03
CTNNA1-202ENST00000517533 PPP1R17O96001 155 aa2.4□□□□□ -2.03
CTNNA1-202ENST00000517533 GYPAP02724 150 aa2.4□□□□□ -2.03
CTNNA1-202ENST00000517533 TRAPPC2P0DI81 140 aa2.4□□□□□ -2.03
CTNNA1-202ENST00000517533 TRAPPC2BP0DI82 140 aa2.4□□□□□ -2.03
CTNNA1-202ENST00000517533 Q8N6K4 173 aa2.4□□□□□ -2.03
CTNNA1-202ENST00000517533 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
CTNNA1-202ENST00000517533 CCL19Q99731 98 aa2.4□□□□□ -2.03
CTNNA1-202ENST00000517533 NOTCH2Q04721 2471 aa2.4□□□□□ -2.03
CTNNA1-202ENST00000517533 ABCA4P78363 2273 aa2.39□□□□□ -2.03
CTNNA1-202ENST00000517533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.39□□□□□ -2.03
CTNNA1-202ENST00000517533 GNGT1P63211 74 aa2.39□□□□□ -2.03
CTNNA1-202ENST00000517533 Q86TA4 180 aa2.39□□□□□ -2.03
CTNNA1-202ENST00000517533 PRO1854Q9UHT4 67 aa2.39□□□□□ -2.03
CTNNA1-202ENST00000517533 MKI67P46013 3256 aaKnown RBP2.39□□□□□ -2.03
CTNNA1-202ENST00000517533 A0A0G2JND7 137 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 A0A1W2PPM0 123 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 TDRG1Q3Y452 100 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 FAM74A4Q5TZK3 123 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 Q6ZQY7 126 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 DYNLRB1Q9NP97 96 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 CDC42SE2Q9NRR3 84 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 CACFD1Q9UGQ2 172 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 LENEPQ9Y5L5 61 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 CHD9Q3L8U1 2897 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 TRANK1O15050 2925 aa2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 COL5A1P20908 1838 aaPredicted RBP2.38□□□□□ -2.03
CTNNA1-202ENST00000517533 CEP290O15078 2479 aa2.37□□□□□ -2.03
CTNNA1-202ENST00000517533 LAMA2P24043 3122 aaKnown RBP2.37□□□□□ -2.03
CTNNA1-202ENST00000517533 HMGN4O00479 90 aa2.37□□□□□ -2.03
CTNNA1-202ENST00000517533 TRGV9Q99603 122 aa2.37□□□□□ -2.03
CTNNA1-202ENST00000517533 PRO3102Q9H379 93 aa2.37□□□□□ -2.03
CTNNA1-202ENST00000517533 V9GYV3 84 aa2.37□□□□□ -2.03
CTNNA1-202ENST00000517533 SPAG17Q6Q759 2223 aa2.37□□□□□ -2.03
CTNNA1-202ENST00000517533 MYO7AQ13402 2215 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 SYS1-DBNDD2H3BUS1 97 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 NDUFC1O43677 76 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 CYB5AP00167 134 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 SPINT3P49223 89 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 SPAG11BQ08648 103 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 PEA15Q15121 130 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 SPAG11AQ6PDA7 123 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms