RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 C8orf49Q96NF6 230 aa2.07□□□□□ -2.08
SCARNA13-201ENST00000516672 AP1S3Q96PC3 154 aa2.07□□□□□ -2.08
SCARNA13-201ENST00000516672 CNFNQ9BYD5 112 aa2.07□□□□□ -2.08
SCARNA13-201ENST00000516672 XCL2Q9UBD3 114 aa2.07□□□□□ -2.08
SCARNA13-201ENST00000516672 PSG8Q9UQ74 426 aa2.07□□□□□ -2.08
SCARNA13-201ENST00000516672 IGKV2-40A0A087WW87 121 aaPredicted RBP2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 TRAV21A0A0B4J279 112 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 LOC389332A0A1B0GUA5 103 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 FABP5P3A8MUU1 101 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 F8W1H4 67 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 H3BNG1 76 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 IGKV2D-40P01614 121 aaPredicted RBP2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 IGKV3-20P01619 116 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 MT-ATP8P03928 68 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 GATA1P15976 413 aaPredicted RBP2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 FCER1GP30273 86 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 NMUP48645 174 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 ZNF80P51504 273 aaPredicted RBP2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 UBE2D1P51668 147 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 CRYBA4P53673 196 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 CKS1BP61024 79 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 RPL24P83731 157 aaKnown RBP2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 SPINK13Q1W4C9 94 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 LCE3BQ5TA77 95 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 LYZL1Q6UWQ5 148 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 SH2D6Q7Z4S9 175 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 ORMDL3Q8N138 153 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 LINC00612Q8N6U2 182 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 NRACQ8N912 160 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 ZNF479Q96JC4 524 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 LINC01587Q99440 93 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 C20orf78Q9BR46 151 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 SPXQ9BT56 116 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 NHP2Q9NX24 153 aaKnown RBP2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 LINC00588Q9Y4M8 146 aa2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 TIMM8BQ9Y5J9 83 aaPredicted RBP2.06□□□□□ -2.08
SCARNA13-201ENST00000516672 TRGV11A0A075B6L2 103 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 TRAV12-2A0A075B6T6 113 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 IGHV1OR15-1A0A075B7D0 117 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 TRAV12-3A0A0B4J271 114 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 PLAC8L1A1L4L8 177 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 H3BMG7 143 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 EIF4EBP3O60516 100 aaPredicted RBP2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 DPM2O94777 84 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 IGKCP01834 107 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 SPRR2DP22532 72 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 RNASE4P34096 147 aaKnown RBP2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 DEFB1P60022 68 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 UBE2D3P61077 147 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 UBE2D2P62837 147 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 ERCC8Q13216 396 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 ETDBQ3ZM63 59 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 LINC01559Q495D7 138 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 CFAP126Q5VTH2 177 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 FAM159AQ6UWV7 190 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 Q6ZUT4 128 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 NFE4Q86UQ8 179 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 MTURNQ8N3F0 131 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 Q8N8P6 123 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 C11orf72Q8NBR9 251 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 PRSS3P2Q8NHM4 247 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 RASL10AQ92737 203 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 MAP1LC3AQ9H492 121 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 GEMIN7Q9H840 131 aaKnown RBP2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 MRPL16Q9NX20 251 aaKnown RBP2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 MSRB1Q9NZV6 116 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 ERG28Q9UKR5 140 aa2.05□□□□□ -2.08
SCARNA13-201ENST00000516672 IGHV3OR16-12A0A075B7B8 117 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 A0A087WX48 190 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 TMSB15BA0A087X1C1 80 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 TRAV12-1A0A0B4J245 112 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 M0QXV9 152 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 ATP5LO75964 103 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 TNFRSF6BO95407 300 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 ATP5G1P05496 136 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 CCL18P55774 89 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 DAD1P61803 113 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 ZNF415Q09FC8 603 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 FOXI1Q12951 378 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 GAGE13Q4V321 117 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 ZC2HC1BQ5TFG8 222 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 FAM222AQ5U5X8 452 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 Q8TAT8 98 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 PPDPFLQ8WWR9 84 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 AMELXQ99217 191 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 MRPL35Q9NZE8 188 aaKnown RBP2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 C11orf21Q9P2W6 132 aa2.04□□□□□ -2.08
SCARNA13-201ENST00000516672 IGKV3D-20A0A0C4DH25 116 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 IGHV3-16A0A0C4DH30 117 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 F8VRH5 84 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 J3QR89 54 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 M0R2P5 195 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 APOMO95445 188 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 SPINK8P0C7L1 97 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 HTN1P15515 57 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 CKS2P33552 79 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 TSPEAR-AS2P59090 65 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 TWIST1Q15672 202 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 PRR9Q5T870 116 aa2.03□□□□□ -2.08
SCARNA13-201ENST00000516672 ZFP2Q6ZN57 461 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 493.2 ms