RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 IGHV3-33P01772 117 aa6.25□□□□□ -1.41
CPNE4-213ENST00000515418 IGHV3-30-3P0DP02 117 aa6.25□□□□□ -1.41
CPNE4-213ENST00000515418 IGHV3-30-5P0DP03 117 aa6.25□□□□□ -1.41
CPNE4-213ENST00000515418 HINT1P49773 126 aaPredicted RBP6.25□□□□□ -1.41
CPNE4-213ENST00000515418 BATFQ16520 125 aa6.25□□□□□ -1.41
CPNE4-213ENST00000515418 SNHG12Q9BXW3 62 aa6.25□□□□□ -1.41
CPNE4-213ENST00000515418 MRPS16Q9Y3D3 137 aaKnown RBP6.25□□□□□ -1.41
CPNE4-213ENST00000515418 FBN3Q75N90 2809 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 J3QQQ9 107 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 EREGO14944 169 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 DLEU1O43261 78 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 HERVK_113P63121 156 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 PLECQ15149 4684 aaKnown RBP6.24□□□□□ -1.41
CPNE4-213ENST00000515418 IGLV10-54A0A075B6I4 117 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 IGLV5-45A0A087WSX0 123 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 MYMXA0A1B0GTQ4 84 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 ZNF815PA8K554 130 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 FAM19A3Q7Z5A8 133 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 PLEKHB2Q96CS7 222 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 KLK12Q9UKR0 248 aa6.24□□□□□ -1.41
CPNE4-213ENST00000515418 LEPROTO15243 131 aa6.23□□□□□ -1.41
CPNE4-213ENST00000515418 NHLRC4P0CG21 123 aaPredicted RBP6.23□□□□□ -1.41
CPNE4-213ENST00000515418 XCL1P47992 114 aa6.23□□□□□ -1.41
CPNE4-213ENST00000515418 C5orf38Q86SI9 138 aa6.23□□□□□ -1.41
CPNE4-213ENST00000515418 DYNC2H1Q8NCM8 4307 aaKnown RBP6.23□□□□□ -1.41
CPNE4-213ENST00000515418 IGHV1-58A0A0C4DH39 117 aa6.22□□□□□ -1.41
CPNE4-213ENST00000515418 M0R143 59 aa6.22□□□□□ -1.41
CPNE4-213ENST00000515418 CCL25O15444 150 aa6.22□□□□□ -1.41
CPNE4-213ENST00000515418 LGALS3P17931 250 aaKnown RBP6.22□□□□□ -1.41
CPNE4-213ENST00000515418 SEC11AP67812 179 aa6.22□□□□□ -1.41
CPNE4-213ENST00000515418 REG3AQ06141 175 aa6.22□□□□□ -1.41
CPNE4-213ENST00000515418 DNAH7Q8WXX0 4024 aa6.22□□□□□ -1.41
CPNE4-213ENST00000515418 IGHV3OR16-9A0A0B4J2B5 98 aa6.22□□□□□ -1.41
CPNE4-213ENST00000515418 H3BRM9 83 aa6.22□□□□□ -1.41
CPNE4-213ENST00000515418 SMIM1B2RUZ4 78 aa6.21□□□□□ -1.42
CPNE4-213ENST00000515418 SIVA1O15304 175 aa6.21□□□□□ -1.42
CPNE4-213ENST00000515418 SS18Q15532 418 aa6.21□□□□□ -1.42
CPNE4-213ENST00000515418 ENHOQ6UWT2 76 aa6.21□□□□□ -1.42
CPNE4-213ENST00000515418 LINC00588Q9Y4M8 146 aa6.21□□□□□ -1.42
CPNE4-213ENST00000515418 STARD9Q9P2P6 4700 aa6.21□□□□□ -1.42
CPNE4-213ENST00000515418 SCGB1D4Q6XE38 83 aa6.2□□□□□ -1.42
CPNE4-213ENST00000515418 C15orf53Q8NAA6 179 aa6.2□□□□□ -1.42
CPNE4-213ENST00000515418 CHCHD10Q8WYQ3 142 aaPredicted RBP6.2□□□□□ -1.42
CPNE4-213ENST00000515418 IGLV5-39A0A0G2JS06 123 aa6.2□□□□□ -1.42
CPNE4-213ENST00000515418 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
CPNE4-213ENST00000515418 BVES-AS1Q5T3Y7 98 aa6.19□□□□□ -1.42
CPNE4-213ENST00000515418 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
CPNE4-213ENST00000515418 HIGD1BQ9P298 99 aa6.19□□□□□ -1.42
CPNE4-213ENST00000515418 NDUFA12Q9UI09 145 aa6.19□□□□□ -1.42
CPNE4-213ENST00000515418 A0A087WZ39 114 aa6.18□□□□□ -1.42
CPNE4-213ENST00000515418 K7EP13 123 aa6.18□□□□□ -1.42
CPNE4-213ENST00000515418 ZNF625Q96I27 306 aaPredicted RBP6.18□□□□□ -1.42
CPNE4-213ENST00000515418 PRR34Q9NV39 138 aa6.18□□□□□ -1.42
CPNE4-213ENST00000515418 TOMM7Q9P0U1 55 aa6.18□□□□□ -1.42
CPNE4-213ENST00000515418 CCL18P55774 89 aa6.18□□□□□ -1.42
CPNE4-213ENST00000515418 HIST1H4GQ99525 98 aa6.18□□□□□ -1.42
CPNE4-213ENST00000515418 DNAH1Q9P2D7 4330 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 A0A0J9YXY3 114 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 GCSHP23434 173 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 ZFAND6Q6FIF0 208 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 CD164L2Q6UWJ8 174 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 HSD52Q0P140 79 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 FOXI1Q12951 378 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 LINC01556Q5JQF7 62 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 Q9H8V8 135 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 APLNQ9ULZ1 77 aa6.17□□□□□ -1.42
CPNE4-213ENST00000515418 CRPP02741 224 aa6.16□□□□□ -1.42
CPNE4-213ENST00000515418 FXYD2P54710 66 aa6.16□□□□□ -1.42
CPNE4-213ENST00000515418 SRSF9Q13242 221 aaKnown RBP eCLIP6.16□□□□□ -1.42
CPNE4-213ENST00000515418 ADAMTSL4-AS1Q5T5F5 129 aa6.16□□□□□ -1.42
CPNE4-213ENST00000515418 Q6ZVH6 145 aa6.16□□□□□ -1.42
CPNE4-213ENST00000515418 COX7B2Q8TF08 81 aa6.16□□□□□ -1.42
CPNE4-213ENST00000515418 A0A0U1RRA0 63 aa6.15□□□□□ -1.42
CPNE4-213ENST00000515418 COX7A2LO14548 114 aa6.15□□□□□ -1.42
CPNE4-213ENST00000515418 CEND1Q8N111 149 aa6.15□□□□□ -1.42
CPNE4-213ENST00000515418 ORAOV1Q8WV07 137 aa6.15□□□□□ -1.42
CPNE4-213ENST00000515418 NDUFA1O15239 70 aa6.15□□□□□ -1.43
CPNE4-213ENST00000515418 DNAH10OSP0CZ25 163 aa6.15□□□□□ -1.43
CPNE4-213ENST00000515418 MALP21145 153 aa6.15□□□□□ -1.43
CPNE4-213ENST00000515418 DAND5Q8N907 189 aa6.15□□□□□ -1.43
CPNE4-213ENST00000515418 LINC00526Q96FQ7 95 aa6.15□□□□□ -1.43
CPNE4-213ENST00000515418 LITAFQ99732 161 aa6.15□□□□□ -1.43
CPNE4-213ENST00000515418 Q9HAA7 133 aa6.15□□□□□ -1.43
CPNE4-213ENST00000515418 DNAH10Q8IVF4 4471 aa6.15□□□□□ -1.43
CPNE4-213ENST00000515418 TMEM238LA0A1B0GVL6 79 aa6.14□□□□□ -1.43
CPNE4-213ENST00000515418 PTTG1IPP53801 180 aa6.14□□□□□ -1.43
CPNE4-213ENST00000515418 C6orf226Q5I0X4 101 aa6.14□□□□□ -1.43
CPNE4-213ENST00000515418 C2orf82Q6UX34 121 aa6.14□□□□□ -1.43
CPNE4-213ENST00000515418 PRSS2P07478 247 aa6.13□□□□□ -1.43
CPNE4-213ENST00000515418 NPC2P61916 151 aa6.13□□□□□ -1.43
CPNE4-213ENST00000515418 MIAQ16674 131 aa6.13□□□□□ -1.43
CPNE4-213ENST00000515418 COL5A1-AS1Q5SY13 56 aa6.13□□□□□ -1.43
CPNE4-213ENST00000515418 KRTAP26-1Q6PEX3 210 aa6.13□□□□□ -1.43
CPNE4-213ENST00000515418 TM2D2Q9BX73 214 aa6.13□□□□□ -1.43
CPNE4-213ENST00000515418 TRAV8-4A0A0B4J246 113 aa6.13□□□□□ -1.43
CPNE4-213ENST00000515418 A0A1B0GV90 55 aa6.13□□□□□ -1.43
CPNE4-213ENST00000515418 EIF4EBP3O60516 100 aaPredicted RBP6.13□□□□□ -1.43
CPNE4-213ENST00000515418 TAL2Q16559 108 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms