RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 SSSCA1O60232 199 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 SPINK4O60575 86 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 IGLC1P0CG04 106 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 C10orf113Q5VZT2 155 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 COMMD6Q7Z4G1 85 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 C5orf38Q86SI9 138 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 DEFB105AQ8NG35 78 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 SPANXDQ9BXN6 97 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 LINC00474Q9P2X8 69 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 BSNQ9UPA5 3926 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 COL6A3P12111 3177 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 MYO7BQ6PIF6 2116 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 ACANP16112 2415 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 NSD3Q9BZ95 1437 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 SCN7AQ01118 1682 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 TOP2BQ02880 1626 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 RAPGEF6Q8TEU7 1601 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 TRBV7-4A0A0J9YYF1 115 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 NDUFA2O43678 99 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 TRAPPC2P0DI81 140 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 TRAPPC2BP0DI82 140 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 KRTAP19-7Q3SYF9 63 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 LINC01600Q96MT4 127 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 APC2O95996 2303 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 GAPVD1Q14C86 1478 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 MYOM1P52179 1685 aa-0.3□□□□□ -2.46
NEDD4-211ENST00000514893 ROCK2O75116 1388 aaKnown RBP-0.31□□□□□ -2.46
NEDD4-211ENST00000514893 ARHGEF5Q12774 1597 aa-0.31□□□□□ -2.46
NEDD4-211ENST00000514893 HMGXB3Q12766 1538 aa-0.31□□□□□ -2.46
NEDD4-211ENST00000514893 OOSP1A8MZH6 123 aa-0.31□□□□□ -2.46
NEDD4-211ENST00000514893 LCN9Q8WX39 176 aa-0.31□□□□□ -2.46
NEDD4-211ENST00000514893 SHROOM2Q13796 1616 aa-0.31□□□□□ -2.46
NEDD4-211ENST00000514893 ALMS1Q8TCU4 4167 aa-0.31□□□□□ -2.46
NEDD4-211ENST00000514893 WNK1Q9H4A3 2382 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 TET3O43151 1660 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 UBE2L5PA0A1B0GUS4 154 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 LINC00959A0A1B0GUT2 108 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 A0A1B0GWA3 101 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 FAM24AA6NFZ4 105 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 F6UZH7 168 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 FGF7P21781 194 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 UBE2L3P68036 154 aaKnown RBP-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 TMEM263Q8WUH6 116 aaKnown RBP-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 PRO1933Q9H354 126 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 APLNQ9ULZ1 77 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 EP300Q09472 2414 aaPredicted RBP-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 KIAA0556O60303 1618 aa-0.32□□□□□ -2.46
NEDD4-211ENST00000514893 QRICH2Q9H0J4 1663 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 MAGI1Q96QZ7 1491 aaPredicted RBP-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 NLRP1Q9C000 1473 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 CRYM-AS1A6NIL9 109 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 M0R2T5 61 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 COX8AP10176 69 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 SEC11AP67812 179 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 S100A12P80511 92 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 Q0VG73 95 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 WHAMMP3Q1A5X7 153 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 SVBPQ8N300 66 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 DEFB123Q8N688 67 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 FAT2Q9NYQ8 4349 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 SETBP1Q9Y6X0 1596 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 EHBP1L1Q8N3D4 1523 aa-0.33□□□□□ -2.46
NEDD4-211ENST00000514893 IQSEC2Q5JU85 1478 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 MUC2Q02817 5179 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 FAM223BA6NKX1 122 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 SPRR2BP35325 72 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 ATP5EP56381 51 aaPredicted RBP-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 BTG2P78543 158 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 SMG6Q86US8 1419 aaKnown RBP-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 PP6455Q8WZ26 134 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 USMG5Q96IX5 58 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 C12orf57Q99622 126 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 SCAPERQ9BY12 1400 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 FMN2Q9NZ56 1722 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 MUC12Q9UKN1 5478 aa-0.34□□□□□ -2.46
NEDD4-211ENST00000514893 A2ML1A8K2U0 1454 aa-0.35□□□□□ -2.46
NEDD4-211ENST00000514893 C1orf167Q5SNV9 1468 aa-0.35□□□□□ -2.46
NEDD4-211ENST00000514893 STAB2Q8WWQ8 2551 aa-0.35□□□□□ -2.46
NEDD4-211ENST00000514893 CHD8Q9HCK8 2581 aa-0.35□□□□□ -2.46
NEDD4-211ENST00000514893 K7EP13 123 aa-0.35□□□□□ -2.47
NEDD4-211ENST00000514893 HMGN1P05114 100 aa-0.35□□□□□ -2.47
NEDD4-211ENST00000514893 COX6CP09669 75 aa-0.35□□□□□ -2.47
NEDD4-211ENST00000514893 S100A1P23297 94 aa-0.35□□□□□ -2.47
NEDD4-211ENST00000514893 SNCAP37840 140 aa-0.35□□□□□ -2.47
NEDD4-211ENST00000514893 FAM167A-AS1Q96KT0 104 aa-0.35□□□□□ -2.47
NEDD4-211ENST00000514893 CDC42SE2Q9NRR3 84 aa-0.35□□□□□ -2.47
NEDD4-211ENST00000514893 CC2D2AQ9P2K1 1620 aa-0.35□□□□□ -2.47
NEDD4-211ENST00000514893 MYOM2P54296 1465 aa-0.35□□□□□ -2.47
NEDD4-211ENST00000514893 NUP188Q5SRE5 1749 aa-0.35□□□□□ -2.47
NEDD4-211ENST00000514893 TULP4Q9NRJ4 1543 aa-0.36□□□□□ -2.47
NEDD4-211ENST00000514893 NAP1L6A6NFF2 107 aa-0.36□□□□□ -2.47
NEDD4-211ENST00000514893 CPSF4LA6NMK7 179 aaKnown RBP-0.36□□□□□ -2.47
NEDD4-211ENST00000514893 RPL13AP3Q6NVV1 102 aa-0.36□□□□□ -2.47
NEDD4-211ENST00000514893 PRO1854Q9UHT4 67 aa-0.36□□□□□ -2.47
NEDD4-211ENST00000514893 XRN1Q8IZH2 1706 aaKnown RBP-0.36□□□□□ -2.47
NEDD4-211ENST00000514893 TGP01266 2768 aa-0.37□□□□□ -2.47
NEDD4-211ENST00000514893 NALCNQ8IZF0 1738 aa-0.37□□□□□ -2.47
NEDD4-211ENST00000514893 ZFHX3Q15911 3703 aa-0.37□□□□□ -2.47
NEDD4-211ENST00000514893 A0A087WVE0 104 aa-0.37□□□□□ -2.47
NEDD4-211ENST00000514893 C1orf54Q8WWF1 131 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms